New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 199892	217 (0.980)	2 (0.010)	2/186	31.4	0.01	intergenic (‑53/+236)	RCAP_rcc00167/RCAP_rcc00168	family 2 glycosyl transferase/ABC transporter polysaccharide inner membrane subunit
	?	NC_014034	3539709 =	230 (0.970)					coding (994/1512 nt)	prpD	2‑methylcitrate dehydratase
Rejected: Position hash score below cutoff.

ATAGCCCGCGATGTTCAGCAGGCGGCTGAGCATGCTGGTGCCGGAGCGGTGCATGCCCAGAACAAGAAGGCAGATCGGGGTCGTGTTCTGGGGCTTGCGGCGGCGCC....................................................................................................  >  NC_014034/199786‑199892 ....................................................................................................CGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACC  >  NC_014034/3539709‑3539808                                                                                                                                                                                                                                                              ctGGTGCATGCCCAGAACAAGAAGGCAGATCGGGGTCGTGTTCTGGGGCTTGCGGCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCCAG                                                               <  1:2709077/99‑1 (MQ=255)                                                GGTGCATGCCCAGAACAAGAAGGCAGATCGGGGTCGTGTTCTGGGGCTTGCGGCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGAg                                                             >  2:2708923/1‑100 (MQ=255)                                                                                                                                                                                                                 ATAGCCCGCGATGTTCAGCAGGCGGCTGAGCATGCTGGTGCCGGAGCGGTGCATGCCCAGAACAAGAAGGCAGATCGGGGTCGTGTTCTGGGGCTTGCGGCGGCGCC....................................................................................................  >  NC_014034/199786‑199892 ....................................................................................................CGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACC  >  NC_014034/3539709‑3539808 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG