New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 199892217 (0.980)2 (0.010) 2/186 31.4 0.01 intergenic (‑53/+236) RCAP_rcc00167/RCAP_rcc00168 family 2 glycosyl transferase/ABC transporter polysaccharide inner membrane subunit
?NC_014034 3539709 = 230 (0.970)coding (994/1512 nt) prpD 2‑methylcitrate dehydratase
Rejected: Position hash score below cutoff.

Only 100 of 246 total aligned reads displayed.

GGCCCGCCGCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACCA  >  NC_014034/3539609‑3539809
                                                                                                    |                                                                                                    
ggCCCGCCGCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCGCACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCa                                                                                                      <  1:3812380/101‑1 (MQ=255)
  cccGCCGCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGACAAt                                                                                                    <  1:4722706/101‑1 (MQ=255)
   ccgccgCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATg                                                                                                   >  2:1196807/1‑101 (MQ=255)
   ccgccgCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATg                                                                                                   <  2:4556942/101‑1 (MQ=255)
     gccgccTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGAt                                                                                                 >  2:1478295/1‑101 (MQ=255)
     gccgccTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGAt                                                                                                 >  1:2135130/1‑101 (MQ=255)
       cgccTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATcc                                                                                               <  1:1971680/101‑1 (MQ=255)
         ccTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGc                                                                                             <  2:3842864/101‑1 (MQ=255)
          cTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCa                                                                                            >  2:2584567/1‑101 (MQ=255)
            tGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCaaa                                                                                          <  1:138630/101‑1 (MQ=255)
               gCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGa                                                                                       <  1:958234/101‑1 (MQ=255)
                 cGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATg                                                                                     >  2:1915733/1‑101 (MQ=255)
                 cGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATg                                                                                     <  2:403595/101‑1 (MQ=255)
                  gCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATgg                                                                                    <  2:3363095/101‑1 (MQ=255)
                   cAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGa                                                                                   >  2:3881419/1‑101 (MQ=255)
                   cAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGa                                                                                   >  2:730283/1‑101 (MQ=255)
                    aGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGAc                                                                                  <  1:3484734/101‑1 (MQ=255)
                       tCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGAcccc                                                                               <  1:77299/101‑1 (MQ=255)
                       tCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGAcccc                                                                               <  2:1219975/101‑1 (MQ=255)
                        cGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCg                                                                              >  1:2652078/1‑101 (MQ=255)
                         ggCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGa                                                                             >  2:1583932/1‑101 (MQ=255)
                         ggCGATCTGGTGCAGGTCGACAGCATCGTGATCAACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGa                                                                             >  2:1074603/1‑101 (MQ=255)
                          gCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGAc                                                                            <  2:2036420/101‑1 (MQ=255)
                          gCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGAc                                                                            >  1:3016689/1‑101 (MQ=255)
                          gCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGAc                                                                            <  1:4665065/101‑1 (MQ=255)
                           cGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACg                                                                           >  2:2773837/1‑101 (MQ=255)
                           cGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACg                                                                           >  1:1340482/1‑101 (MQ=255)
                            gATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGc                                                                          >  1:104934/1‑101 (MQ=255)
                              tCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCa                                                                        <  1:562997/101‑1 (MQ=255)
                                tGGTGCAGTTCGACGGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGc                                                                      <  1:4095240/101‑1 (MQ=255)
                                tGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGc                                                                      >  2:4291547/1‑101 (MQ=255)
                                 ggTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGcc                                                                     >  2:360361/1‑101 (MQ=255)
                                  gTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCcg                                                                    <  2:3795077/101‑1 (MQ=255)
                                   tGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCcgc                                                                   >  1:262240/1‑101 (MQ=255)
                                     cAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCga                                                                 >  1:2379848/1‑101 (MQ=255)
                                      aGGTCGACAGCATCGTGATCCCCACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCgag                                                                <  1:3458534/101‑1 (MQ=255)
                                       ggTCGACAGCATCGTTAGCCACACCTCGCATCACACCCGTCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCgaga                                                               <  2:808096/101‑1 (MQ=255)
                                       ggTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCgaga                                                               <  2:2185655/101‑1 (MQ=255)
                                       ggTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCgaga                                                               <  1:912423/101‑1 (MQ=255)
                                        gTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGAc                                                              <  2:3002214/101‑1 (MQ=255)
                                        gTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGAc                                                              <  1:534289/101‑1 (MQ=255)
                                        gTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGAc                                                              >  2:201108/1‑101 (MQ=255)
                                        gTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGAc                                                              >  1:3327948/1‑101 (MQ=255)
                                            aCAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTg                                                          >  2:4482737/1‑101 (MQ=255)
                                             cAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTgg                                                         <  1:1154517/101‑1 (MQ=255)
                                              aGCATCGTGATCCACCCCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGa                                                        <  2:2536155/101‑1 (MQ=255)
                                              aGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGa                                                        <  2:212318/101‑1 (MQ=255)
                                                 aTCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCa                                                     <  2:4137622/101‑1 (MQ=255)
                                                  tCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCAt                                                    >  1:685361/1‑101 (MQ=255)
                                                  tCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCAt                                                    <  2:4374776/101‑1 (MQ=255)
                                                  tCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCAt                                                    <  1:1478396/101‑1 (MQ=255)
                                                    gTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTc                                                  >  2:3818352/1‑101 (MQ=255)
                                                    gTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTc                                                  <  2:2328352/101‑1 (MQ=255)
                                                    gTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTc                                                  >  1:4431081/1‑101 (MQ=255)
                                                     tGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCg                                                 <  1:2862001/101‑1 (MQ=255)
                                                      gATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGa                                                >  1:2991197/1‑101 (MQ=255)
                                                         ccACACCTCGCATCCCACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCa                                             <  2:480271/101‑1 (MQ=255)
                                                          cacaCCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCAt                                            >  2:1342161/1‑101 (MQ=255)
                                                            cacCCCGCATCACCCCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGt                                          <  2:3461705/101‑1 (MQ=255)
                                                              ccTCGCATCCCACCCATCACGTCATCGGCACCGGCGCCAATGACCCGCAAAAGATGGACCCCGCCGCCAGCCGCGAGACGCTGGACCATTCGATCATGtat                                        <  2:3003330/101‑1 (MQ=255)
                                                              ccTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGCCCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGtat                                        <  1:1865326/101‑1 (MQ=255)
                                                              ccTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGtat                                        <  1:453104/101‑1 (MQ=255)
                                                                tCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTatat                                      >  2:4151069/1‑101 (MQ=255)
                                                                 cGCATCACACCCATCCCGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATc                                     <  2:562104/101‑1 (MQ=255)
                                                                 cGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATc                                     >  1:319800/1‑101 (MQ=255)
                                                                 cGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATc                                     >  1:3341911/1‑101 (MQ=255)
                                                                 cGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATc                                     <  2:2920522/101‑1 (MQ=255)
                                                                 cGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCCGGACCATTCGATCATGTATATc                                     >  1:2795650/1‑101 (MQ=255)
                                                                   cATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCtt                                   >  1:2069508/1‑101 (MQ=255)
                                                                   cATCACACCCATCACGTCATCGGCACCGGAGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCtt                                   <  1:3719902/101‑1 (MQ=255)
                                                                    aTCACACCCATCCCGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCttt                                  <  2:1340390/101‑1 (MQ=255)
                                                                    aTCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCttt                                  <  1:1902943/101‑1 (MQ=255)
                                                                    aTCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCttt                                  <  2:3035506/101‑1 (MQ=255)
                                                                     tCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTg                                 >  2:4440778/1‑101 (MQ=255)
                                                                      cacaCCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGc                                >  1:2060824/1‑101 (MQ=255)
                                                                           ccATCACGTCATCGGCCCCGGCGCCAATGATCCGCAAAAGATGGCCCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTcg                           <  1:3256058/101‑1 (MQ=255)
                                                                             aTCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTcgcg                         <  1:360395/101‑1 (MQ=255)
                                                                               cACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCt                       >  2:2898839/1‑101 (MQ=255)
                                                                                aCGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTg                      >  2:179501/1‑101 (MQ=255)
                                                                                   tCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTggag                   >  2:3285644/1‑101 (MQ=255)
                                                                                    cATCGGCACCGGCGCCAATGATCCGCAAAAGATGGCCCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTggagg                  <  1:3766420/101‑1 (MQ=255)
                                                                                     aTCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTggagga                 >  1:2456713/1‑101 (MQ=255)
                                                                                     aTCCGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTggagga                 >  1:177885/1‑101 (MQ=255)
                                                                                       cGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATg               <  2:3535766/101‑1 (MQ=255)
                                                                                       cGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTAGCGCTGGAGGATg               >  1:1620682/1‑101 (MQ=255)
                                                                                        ggCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATgg              <  1:2774002/101‑1 (MQ=255)
                                                                                        ggCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATgg              >  1:3934500/1‑101 (MQ=255)
                                                                                         gCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggc             >  2:3697773/1‑101 (MQ=255)
                                                                                         gCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggc             <  2:3107860/101‑1 (MQ=255)
                                                                                         gCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggc             >  1:3097956/1‑101 (MQ=255)
                                                                                         gCACCGCCCCCAATGGGCCGCAAAAGATGGCCCCCGCGGCCAGCCGCGAGACCCTGGACGATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggc             <  1:788899/101‑1 (MQ=255)
                                                                                          cACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggcg            >  2:1363313/1‑101 (MQ=255)
                                                                                          cACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATggcg            >  1:4315870/1‑101 (MQ=255)
                                                                                             cGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCt         >  1:1132368/1‑101 (MQ=255)
                                                                                                gcccAATGATCCGCAAAAGAGGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGc      <  1:1476974/99‑1 (MQ=255)
                                                                                                cgcCAATGATCCGCAAAAGATGGGCCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGc      >  1:3818866/1‑101 (MQ=255)
                                                                                                cgcCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGc      <  2:3392305/101‑1 (MQ=255)
                                                                                                   cAATGATCCGCAAAAGATGGCCCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCAcc   <  1:4291794/101‑1 (MQ=255)
                                                                                                    aaTGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACCa  >  2:4239551/1‑101 (MQ=255)
                                                                                                    aaTGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACCa  >  1:4181202/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GGCCCGCCGCCTTGGGCCGCAGATCGGCGATCTGGTGCAGGTCGACAGCATCGTGATCCACACCTCGCATCACACCCATCACGTCATCGGCACCGGCGCCAATGATCCGCAAAAGATGGACCCCGACGCCAGCCGCGAGACGCTGGACCATTCGATCATGTATATCTTTGCCGTCGCGCTGGAGGATGGCGGCTGGCACCA  >  NC_014034/3539609‑3539809

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG