New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2292661 =	175 (0.800)	2 (0.010)	2/184	31.3	0.01	coding (178/1623 nt)	phaD	monovalent cation/proton antiporter subunit D
	?	NC_014034	= 3128223	212 (0.890)					intergenic (‑392/‑38)	RCAP_rcc02934/RCAP_rcc02935	phage integrase/hypothetical protein
Rejected: Position hash score below cutoff.

TGATCTATGACGACCGGCAGCGCCGCGCGAAACTGGCGATCAGCCTGGTCTCGGCCTTCGCGACGCTGGTCTGCGCGCTCGAGCTTTTGTCGCGGGCCAAGGCGCAGG....................................................................................................  <  NC_014034/2292768‑2292661 ....................................................................................................GGCGCAGGATGCCCGAGGGCGGGGCGCTTGTCGCGCCCGGATCCGCGGCGGGCTCGGTGATCGGGCAGGGGAAGGCCGCAAGGGCCGCGATCAGGATCGGGCAGATAG  <  NC_014034/3128223‑3128124                                                                                                                                                                                                                                                         TCAGCCTGGTCTCGGCCTTCGCGACGCTGGTCTGCGCGCTCGAGCTTTTGTCGCGGGCCAAGGCGCAGGATGCCCGAGGGCGGGGCGCTTGTCGCGCCCGG                                                                      >  1:4201446/1‑101 (MQ=255)                                                                        TGCGCGCTCGAGCTTTTGTCGCGGGCCAAGGCGCAGGATGCCCGAGGGCGGGGCGCTTGTCGCGCCCGGATCCGCGGCGGGCTCGGTGATCGGGCAGGGGA                                      <  2:4201200/101‑1 (MQ=255)                                                                                                                                                                                                                  TGATCTATGACGACCGGCAGCGCCGCGCGAAACTGGCGATCAGCCTGGTCTCGGCCTTCGCGACGCTGGTCTGCGCGCTCGAGCTTTTGTCGCGGGCCAAGGCGCAGG....................................................................................................  <  NC_014034/2292768‑2292661 ....................................................................................................GGCGCAGGATGCCCGAGGGCGGGGCGCTTGTCGCGCCCGGATCCGCGGCGGGCTCGGTGATCGGGCAGGGGAAGGCCGCAAGGGCCGCGATCAGGATCGGGCAGATAG  <  NC_014034/3128223‑3128124 Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG