New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2292661 =175 (0.800)2 (0.010) 2/184 31.3 0.01 coding (178/1623 nt) phaD monovalent cation/proton antiporter subunit D
?NC_014034 = 3128223 212 (0.890)intergenic (‑392/‑38) RCAP_rcc02934/RCAP_rcc02935 phage integrase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 240 total aligned reads displayed.

CCTATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAGG  >  NC_014034/3128123‑3128323
                                                                                                    |                                                                                                    
ccTATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCTTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCAt                                                                                                      <  2:4723494/101‑1 (MQ=255)
ccTATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCAt                                                                                                      <  1:96595/101‑1 (MQ=255)
  tATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATcc                                                                                                    >  1:714658/1‑101 (MQ=255)
  tATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATcc                                                                                                    >  1:735994/1‑101 (MQ=255)
   aTCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCCCCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCt                                                                                                   <  1:2944001/101‑1 (MQ=255)
   aTCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCt                                                                                                   <  1:2646336/101‑1 (MQ=255)
   aTCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCt                                                                                                   >  2:4700133/1‑101 (MQ=255)
   aTCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCt                                                                                                   <  2:45053/101‑1 (MQ=255)
     cTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTgc                                                                                                 >  2:2969217/1‑101 (MQ=255)
     cTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTgc                                                                                                 >  1:2009425/1‑101 (MQ=255)
       gCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTgcgc                                                                                               >  2:753923/1‑101 (MQ=255)
        cccGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCCCCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGcc                                                                                              <  1:1222452/101‑1 (MQ=255)
         ccGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCg                                                                                             >  2:1294589/1‑101 (MQ=255)
         ccGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCg                                                                                             <  2:372869/101‑1 (MQ=255)
           gATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGAGCCCCGCCCTCGGGCATCCTGCGCCGGa                                                                                           >  2:1314889/1‑101 (MQ=255)
               cTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCa                                                                                       <  2:1156199/101‑1 (MQ=255)
               cTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCa                                                                                       >  2:437245/1‑101 (MQ=255)
               cTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGCGCATCCTGCGCCGGAGGCa                                                                                       >  1:4254190/1‑101 (MQ=255)
                tGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAg                                                                                      <  1:1270597/101‑1 (MQ=255)
                 gATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGc                                                                                     <  1:1001104/101‑1 (MQ=255)
                     gcgGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACg                                                                                 >  1:3684223/1‑101 (MQ=255)
                     gcgCCCCTTGCGGCCTTCCCCCGCCCGATCCCGCGGCCCGCCGCGGATGCGGTCGCGACAAGCTCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACg                                                                                 <  2:907132/101‑1 (MQ=255)
                      cgGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACgg                                                                                <  2:3120031/101‑1 (MQ=255)
                       ggCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGc                                                                               <  2:2698525/101‑1 (MQ=255)
                       ggCCCTTCCGGCCTTCCCCTGCCCGACCACCGAGCCCGCCGCGGATCCGGGCGCGACAATCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGc                                                                               <  1:1409619/101‑1 (MQ=255)
                        gCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCa                                                                              <  2:4285065/101‑1 (MQ=255)
                          ccTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAgg                                                                            >  1:3127263/1‑101 (MQ=255)
                           cTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAggg                                                                           >  2:871772/1‑101 (MQ=255)
                           cTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAggg                                                                           >  1:3007820/1‑101 (MQ=255)
                              aggtcgccccctTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAgg                                                                        <  1:35831/93‑1 (MQ=255)
                               cGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGc                                                                       >  1:84510/1‑101 (MQ=255)
                                ggCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCg                                                                      <  2:4121180/101‑1 (MQ=255)
                                      ccccTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCa                                                                >  2:537236/1‑101 (MQ=255)
                                        ccTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCAtg                                                              <  2:3069736/101‑1 (MQ=255)
                                        ccTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCAtg                                                              <  2:1701036/101‑1 (MQ=255)
                                         cttcccGACCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCAtgt                                                             <  1:1801470/98‑1 (MQ=255)
                                            gccGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTgcg                                                          >  2:475643/2‑101 (MQ=255)
                                              cGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTgcggg                                                        >  2:2646710/1‑101 (MQ=255)
                                              cGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTgcggg                                                        >  1:765841/1‑101 (MQ=255)
                                               gATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTgcgggc                                                       >  2:3633468/1‑101 (MQ=255)
                                                 tCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTgcgggcgg                                                     <  2:4260472/101‑1 (MQ=255)
                                                     cGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTg                                                 >  1:3161197/1‑101 (MQ=255)
                                                      gAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGAGGCAGCGACGGCAGGGAGGCGGGGGCATGTGAGGGCGGATTGt                                                >  2:1104352/1‑101 (MQ=255)
                                                      gAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGt                                                >  2:1398149/1‑101 (MQ=255)
                                                        gCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGGTTGTCg                                              >  2:2550854/1‑101 (MQ=255)
                                                        gCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCg                                              <  2:3401235/101‑1 (MQ=255)
                                                         cccGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGa                                             >  2:2308025/1‑101 (MQ=255)
                                                         cccGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGa                                             >  1:2191635/1‑101 (MQ=255)
                                                          ccgccgCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGAt                                            <  1:1030353/101‑1 (MQ=255)
                                                          ccgccgCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGAt                                            <  1:2538458/101‑1 (MQ=255)
                                                           cgccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAAAAGGGGGCATCTGGGGGCGGATTGTCGATc                                           >  1:304818/1‑101 (MQ=255)
                                                            gccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATcc                                          >  2:4194611/1‑101 (MQ=255)
                                                            gccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATcc                                          <  2:2018794/101‑1 (MQ=255)
                                                             ccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCg                                         <  2:2976616/101‑1 (MQ=255)
                                                             ccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCg                                         >  2:3968613/1‑101 (MQ=255)
                                                             ccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCg                                         >  1:4238366/1‑101 (MQ=255)
                                                             ccgcGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCg                                         <  2:1776645/101‑1 (MQ=255)
                                                               gcgGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGaa                                       <  1:1425618/101‑1 (MQ=255)
                                                                 ggATCCGGGCGCGACGAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAAcc                                     >  1:4003558/1‑101 (MQ=255)
                                                                   aTCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCtt                                   >  2:163169/1‑101 (MQ=255)
                                                                   aTCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCtt                                   <  1:193521/101‑1 (MQ=255)
                                                                    tCCGGGCGCGACAAGCGCGCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTc                                  <  1:1104438/101‑1 (MQ=255)
                                                                    tCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTc                                  <  1:4721945/101‑1 (MQ=255)
                                                                    tCCGGCCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTc                                  <  2:4545297/101‑1 (MQ=255)
                                                                     ccGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGCGGCGGGGGCATGTGAGGGCGGGTTGTCGATCCGAACCTTCg                                 >  1:183351/1‑101 (MQ=255)
                                                                     ccGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCg                                 <  1:2680745/101‑1 (MQ=255)
                                                                       gggCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGa                               >  1:2303913/1‑101 (MQ=255)
                                                                       gggCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGa                               <  1:4668430/101‑1 (MQ=255)
                                                                         gcgcGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAac                             <  1:4565339/101‑1 (MQ=255)
                                                                           gcgACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGaaacc                           >  2:2238174/1‑98 (MQ=255)
                                                                            cgACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACAcc                          <  1:650008/101‑1 (MQ=255)
                                                                             gACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCg                         <  2:3030000/101‑1 (MQ=255)
                                                                              aCAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGa                        >  1:352204/1‑101 (MQ=255)
                                                                              aCAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGa                        >  1:375413/1‑101 (MQ=255)
                                                                              aCAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGa                        >  1:4547222/1‑101 (MQ=255)
                                                                              aCAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGa                        >  1:2253036/1‑101 (MQ=255)
                                                                               cAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAg                       >  1:2021340/1‑101 (MQ=255)
                                                                               cAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAg                       >  2:3207450/1‑101 (MQ=255)
                                                                                aaGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAgg                      >  1:412816/1‑101 (MQ=255)
                                                                                 aGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGt                     <  1:4352934/101‑1 (MQ=255)
                                                                                    gccccgcccTCGGGCATCCTGCGCCGGACGCAGCGACGGAAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGa                  >  1:2328911/1‑101 (MQ=255)
                                                                                     ccccgcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGAc                 >  1:4151674/1‑101 (MQ=255)
                                                                                     ccccgcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGAc                 >  2:1491978/1‑101 (MQ=255)
                                                                                      cccgcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACa                <  2:81136/101‑1 (MQ=255)
                                                                                        cgcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATg              <  1:4392699/101‑1 (MQ=255)
                                                                                         gcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGt             <  1:335397/101‑1 (MQ=255)
                                                                                         gcccTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGt             <  2:1782225/101‑1 (MQ=255)
                                                                                            cTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGc          <  2:652081/101‑1 (MQ=255)
                                                                                            cTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGc          <  1:3910331/101‑1 (MQ=255)
                                                                                             tCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCa         >  2:3378387/1‑101 (MQ=255)
                                                                                              cGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAg        >  2:4633615/1‑101 (MQ=255)
                                                                                               gggCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGa       >  1:2079610/1‑101 (MQ=255)
                                                                                                ggCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGAt      <  1:475694/101‑1 (MQ=255)
                                                                                                ggCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGGGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGAGGACATGTCGCAGAt      >  1:1395277/1‑101 (MQ=255)
                                                                                                 gCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATc     <  2:3382030/101‑1 (MQ=255)
                                                                                                  cATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCa    <  2:3160997/101‑1 (MQ=255)
                                                                                                   aTCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAg   >  2:3818785/1‑101 (MQ=255)
                                                                                                   aTCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAg   >  2:1478775/1‑101 (MQ=255)
                                                                                                   aTCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAg   <  1:4189526/101‑1 (MQ=255)
                                                                                                    tCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAgg  <  2:3874240/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CCTATCTGCCCGATCCTGATCGCGGCCCTTGCGGCCTTCCCCTGCCCGATCACCGAGCCCGCCGCGGATCCGGGCGCGACAAGCGCCCCGCCCTCGGGCATCCTGCGCCGGACGCAGCGACGGCAGGGAGGCGGGGGCATGTGCGGGCGGATTGTCGATCCGAACCTTCGGAACACCGAGGTGGACATGTCGCAGATCAGG  >  NC_014034/3128123‑3128323

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG