New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 233017550 (0.220)45 (0.190) 10/196 25.3 0.30 intergenic (+150/+162) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
?NC_014034 = 2341510 162 (0.680)intergenic (‑61/+9) purQ/purS phosphoribosylformylglycinamidine synthase subunit PurQ/phosphoribosylformylglycinamidine synthase subunit PurS
Rejected: Position hash score below cutoff.

Only 100 of 164 total aligned reads displayed.

CGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCCG  >  NC_014034/2341410‑2341608
                                                                                                     |                                                                                                  
cGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.cccc                                                                                                    >  1:234501/1‑101 (MQ=255)
   aGTTCGGCCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCgg                                                                                                 <  2:2857306/101‑1 (MQ=255)
   aGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCgg                                                                                                 >  1:4168117/1‑101 (MQ=255)
   aGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCgg                                                                                                 >  1:1230908/1‑101 (MQ=255)
   aGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCgg                                                                                                 >  2:2181774/1‑101 (MQ=255)
   aGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCgg                                                                                                 >  2:3225042/1‑101 (MQ=255)
    gTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCTAAAGGGCTCCTGCTTTTTCTTGGCTCAAATAAGCCAGGGGTCCGCGGCCAGGG.CCCACGgc                                                                                                >  2:3878042/1‑101 (MQ=255)
    gTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGgc                                                                                                >  1:1490163/1‑101 (MQ=255)
    gTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGgc                                                                                                >  2:1958924/1‑101 (MQ=255)
      tCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCA.CCCCCGgcgc                                                                                              >  1:2387085/1‑101 (MQ=255)
       cGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGcc                                                                                             >  1:3948300/1‑101 (MQ=255)
       cGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGcc                                                                                             >  1:4729082/1‑101 (MQ=255)
         aCCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCt                                                                                           >  2:4705801/1‑101 (MQ=255)
           cccGGAAGGGTAGTGAGGGGGATTTTGATCGGGAAAGGGCTCCTGCTTTTTTTTGGCTCAAATCCGCGGGGGTTCCGGGGGAAGCC.CCCCGGGCGCCCTca                                                                                         <  2:3054781/101‑1 (MQ=255)
           cccGCAAAGGTGATGACGGCCGCTTTTATCGCGAAAGGTCCCCTCCTTTTTTTTGCCAAAAATGCCCGGGGGGTCGGGGGGAAGCG.CCCCCGGCGCCCTca                                                                                         <  2:2225661/101‑1 (MQ=255)
            ccGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTcag                                                                                        >  1:2838680/1‑101 (MQ=255)
             cGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTcagc                                                                                       >  2:2584785/1‑101 (MQ=255)
              ggAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTcagca                                                                                      >  1:3416318/1‑101 (MQ=255)
               gAAAGGTGATGGCGGCGTTTTTCATCGAGAAGGGGCTCCTGTTTTTTCTTGGCTAAAATCCGCGGGGGGCCGGGGGGCCGCC.CCCCCGGCGCCCTcagcag                                                                                     <  2:2544800/101‑1 (MQ=255)
               gAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTcagcag                                                                                     >  1:2132301/1‑101 (MQ=255)
               gAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTcagcag                                                                                     >  1:1126269/1‑101 (MQ=255)
                 aaGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGAt                                                                                   >  1:625277/1‑101 (MQ=255)
                   ggTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGAtct                                                                                 >  1:3796967/1‑101 (MQ=255)
                     tggggaCGGCGCTTTCCACCGAGAAAGGCCTCCTCTTTTTTCTTGGCTAAAATCCGCGGGGGGCCGGGGGGCGCCC.CCCCCGGCGCCCTCAGCAGATCTCg                                                                               <  1:2181898/97‑1 (MQ=255)
                     tgatgaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCg                                                                               >  1:1705217/1‑101 (MQ=255)
                      gatgaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGa                                                                              >  1:1264072/1‑101 (MQ=255)
                      gatgaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGa                                                                              >  2:83535/1‑101 (MQ=255)
                       atgaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGAc                                                                             >  2:1777508/1‑101 (MQ=255)
                        tgaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGACCGGGGGCAGCG.CCCCCGCCGCCCTCAGCAGATCTCGACg                                                                            >  2:1902352/1‑101 (MQ=255)
                         gaCGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACgg                                                                           >  2:2973303/1‑101 (MQ=255)
                               ggcTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTAtt                                                                     >  2:2502251/1‑101 (MQ=255)
                                   ttCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTtctc                                                                 >  2:2532789/1‑101 (MQ=255)
                                    tCATCGCGAAGGGGCCCCTGCTTTTCTTGGGCTCAAACGCGCCGGGGGTCCGGGGGCGCCG.CCCCGGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCg                                                                <  2:1361953/101‑1 (MQ=255)
                                     cATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGa                                                               >  1:43352/1‑101 (MQ=255)
                                      aTCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGAt                                                              >  2:461507/1‑101 (MQ=255)
                                        cgcgAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCa                                                            <  2:4717319/101‑1 (MQ=255)
                                         gcgAGAGGGTTCCTTTTTTTTTTTGGCAAAAGTGCGGGGGGGGCCGGGGGGCCGCC.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCAc                                                           <  1:3926225/101‑1 (MQ=255)
                                          cgAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACg                                                          >  1:108070/1‑101 (MQ=255)
                                          cgAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACg                                                          >  2:4187259/1‑101 (MQ=255)
                                           gAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACgg                                                         >  1:212036/1‑101 (MQ=255)
                                           gAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACga                                                         >  1:1918880/1‑100 (MQ=255)
                                            aaaGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGt                                                        >  2:4437034/1‑101 (MQ=255)
                                            aaaGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGCCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGt                                                        <  2:1487189/101‑1 (MQ=255)
                                               gggCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGCATTTCTCGATCACGGTAtt                                                     >  1:3053029/1‑101 (MQ=255)
                                                ggCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTg                                                    >  2:3735499/1‑101 (MQ=255)
                                                 gCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTgg                                                   >  1:3222455/1‑101 (MQ=255)
                                                 gCTCCTCCTTTTCTTTGGCGTAAATCCGCCGGGTGCCCGGGGCCACCG.CCCGGCGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTgg                                                   <  1:1576275/101‑1 (MQ=255)
                                                  cTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGc                                                  >  1:1636719/1‑101 (MQ=255)
                                                    ccTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCga                                                >  1:868132/1‑101 (MQ=255)
                                                      tGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCgaga                                              >  2:1538270/1‑101 (MQ=255)
                                                       tcTTTTTTCTGGCCCAAACGCGGCGGGGCGCGGGGGGGACCCCCCCCCGCCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCgaga                                              <  1:4666684/100‑1 (MQ=255)
                                                         tttttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGt                                           >  2:3443461/1‑101 (MQ=255)
                                                         tttttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGt                                           >  2:1975951/1‑101 (MQ=255)
                                                           tttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGttt                                         >  2:1387108/1‑101 (MQ=255)
                                                           tttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGttt                                         >  2:3786462/1‑101 (MQ=255)
                                                           tttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGttt                                         >  1:2050979/1‑101 (MQ=255)
                                                            ttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtc                                        >  2:506987/1‑101 (MQ=255)
                                                            ttCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtc                                        >  1:3501673/1‑101 (MQ=255)
                                                             tCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtct                                       >  2:1793051/1‑101 (MQ=255)
                                                                 ggCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGca                                   >  1:2738428/1‑101 (MQ=255)
                                                                 ggCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGca                                   >  1:4301061/1‑101 (MQ=255)
                                                                 ggCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGca                                   >  1:3453851/1‑101 (MQ=255)
                                                                   cTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGcaca                                 >  1:3421866/1‑101 (MQ=255)
                                                                    caaaaTCCGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACAt                                <  2:2135221/99‑1 (MQ=255)
                                                                     cAAATGCGCCGGGGCTCCGGGGCCAGTG.CCCCCGGCGCCCTCAGCAGATCTCGTCGGTGTATTTCTCGATCACTGTATTGGCGAGAAGTTTCTCGCACATc                               <  2:1497266/101‑1 (MQ=255)
                                                                     cAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATc                               >  2:2825088/1‑101 (MQ=255)
                                                                     cAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATc                               >  2:1142849/1‑101 (MQ=255)
                                                                      aaagccGCCGGGGGTCCGGGGGCCGCG.CCCCGGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCg                              <  2:542978/96‑1 (MQ=255)
                                                                      aaaTACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCg                              >  2:426292/1‑101 (MQ=255)
                                                                       aaTACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGc                             >  2:3430994/1‑101 (MQ=255)
                                                                        atccGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGcc                            <  2:618700/98‑1 (MQ=255)
                                                                          aCGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCtt                          >  1:2516987/1‑101 (MQ=255)
                                                                             ccGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGAc                       >  2:3804929/1‑101 (MQ=255)
                                                                             ccGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGAc                       >  1:4506994/1‑101 (MQ=255)
                                                                             ccGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGAc                       >  1:1994392/1‑101 (MQ=255)
                                                                              cGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACt                      >  1:727505/1‑101 (MQ=255)
                                                                               gggggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACCTTGCCTTGACtt                     >  2:2000861/1‑101 (MQ=255)
                                                                               gggggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACtt                     >  2:3166353/1‑101 (MQ=255)
                                                                               gggggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACtt                     >  1:4530196/1‑101 (MQ=255)
                                                                               gggggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACtt                     >  1:518929/1‑101 (MQ=255)
                                                                               gggggCCCGGGGGCACCC.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACtt                     <  1:693927/101‑1 (MQ=255)
                                                                                ggggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCttagatcg                    >  2:4331222/1‑95 (MQ=255)
                                                                                ggggTCCGGGGGCAGCC.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTc                    <  2:3467821/101‑1 (MQ=255)
                                                                                 gggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCg                   >  2:2802997/1‑101 (MQ=255)
                                                                                  ggTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCgg                  <  2:2068190/101‑1 (MQ=255)
                                                                                    tCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGtt                >  2:2634268/1‑101 (MQ=255)
                                                                                     gggggggCCGCC.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGttt               <  2:1126183/99‑1 (MQ=255)
                                                                                      cGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc              >  1:3790302/1‑101 (MQ=255)
                                                                                      cGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc              >  1:3723427/1‑101 (MQ=255)
                                                                                      cGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc              >  1:187685/1‑101 (MQ=255)
                                                                                      cGGGGCCAGCC.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc              <  2:1230818/101‑1 (MQ=255)
                                                                                          ggCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTccgcc          >  1:3034876/1‑101 (MQ=255)
                                                                                            gccccccccccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTccgccg         <  2:212011/95‑1 (MQ=255)
                                                                                            cccccccccccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTcctccg         <  2:4021368/95‑1 (MQ=255)
                                                                                            cAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGGGGATTTCTCGATCACGGGATTGGCGAGAAGTTTCTCGCACATCGACTTGCCTTCGGGTTCcgccgc        >  1:4426285/1‑101 (MQ=255)
                                                                                             aGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCa       >  1:2743388/1‑101 (MQ=255)
                                                                                                g.cCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGcc    >  1:175991/1‑101 (MQ=255)
                                                                                                 ccccccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGcc    <  2:2074733/100‑1 (MQ=255)
                                                                                                 ccccccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGcc    <  2:2315108/100‑1 (MQ=255)
                                                                                                   cccgGGCGCCCTCAGCAGATCTCGACGGTGTTTTTCTTGGTCGCGGTATTGGCGAGAAGTTTCTCGCTCATTGCGTTGACTTCGGTTTCCGCCGCAGCCcg  <  2:3918586/101‑1 (MQ=255)
                                                                                                     |                                                                                                  
CGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGGCTCCTGCTTTTTCTTGGCTCAAATACGCCGGGGGTCCGGGGGCAGCG.CCCCCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCCG  >  NC_014034/2341410‑2341608

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG