New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2188415 =	167 (0.700)	17 (0.070)	4/194	27.2	0.15	intergenic (+76/+152)	feoB2/allA	ferrous iron transport protein B/ureidoglycolate hydrolase
	?	NC_014034	2747886 =	30 (0.120)					intergenic (‑218/+75)	RCAP_rcc02553/RCAP_rcc02554	hypothetical protein/NmrA family protein
Rejected: Position hash score below cutoff.

GCGATCCGGCTGCGGCAGGACCGCTTGCCGCAAGCGCGCCAGAGGCCAGCGCCTGACCCGGCGGGCGAGAAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCG....................................................................................................  <  NC_014034/2188517‑2188415 ....................................................................................................CCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGCCGCCCGCACGGTT  >  NC_014034/2747886‑2747985                                                                                                                                                                                                                    GGCTGCGGCAGGACCGCTTGCCGCAAGCGCGCCAGAGGCCAGCGCCTGACCCGGCGGGCGAGAAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGGGGGC                                                                                                 >  2:1586647/1‑101 (MQ=255)            GCGGCAGGACCGCTTGCCGCAAGCGCGCCAGAGGCCAGCGCCTGACCCGGCGGGCGAGAAGCGCCCGCCGAGGGCGGGGCGGGCGCCGGCCGGGGGgcctt                                                                                             >  1:5001755/1‑96 (MQ=255)                 AGGACCGCTTGCCGCAAGCGCGCCAGAGGCCAGCGCCTGACCCGGCGGGCGAGAAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCCGGGGCCTTTGGGCC                                                                                        >  2:1844433/1‑101 (MQ=255)                                                                                     cCGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCC                    >  1:3591268/2‑101 (MQ=0)                                                                                     cCGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCC                    <  1:880418/100‑1 (MQ=0)                                                                                     cCGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCC                    >  2:363469/2‑101 (MQ=0)                                                                                      CGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCA                   >  2:77048/1‑101 (MQ=0)                                                                                      CGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCA                   >  2:4397434/1‑101 (MQ=0)                                                                                      CGGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCA                   >  2:4089283/1‑101 (MQ=0)                                                                                       GGGCCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAG                  >  1:3730075/1‑101 (MQ=0)                                                                                        ggcCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGC                 >  2:2131794/4‑101 (MQ=0)                                                                                        ggcCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGC                 >  1:1597133/4‑101 (MQ=0)                                                                                          cCGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGC               >  2:1302481/2‑101 (MQ=1)                                                                                           CGGGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGCC              >  1:850567/1‑101 (MQ=1)                                                                                            GGGCGCTGCCCGAGGGCCTTTGGGCCCTCGCGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCCAGGTCAGCTCATGCCAGCGCCG             >  2:850825/1‑101 (MQ=0)                                                                                             GGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGCCGC            >  2:168472/1‑101 (MQ=1)                                                                                             GGCGCTGCCCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGCCGC            >  1:445109/1‑101 (MQ=1)                                                                                                                                                                                                             GCGATCCGGCTGCGGCAGGACCGCTTGCCGCAAGCGCGCCAGAGGCCAGCGCCTGACCCGGCGGGCGAGAAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCG....................................................................................................  <  NC_014034/2188517‑2188415 ....................................................................................................CCGAGGGCCTTTGGGCCCTCGGGGGTCACAGGACCTCTGTGACGCATGGCCAAGGCGATGGCCTTGGCCAAGGTCAGCTCATGCCAGCGCCGCCCGCACGGTT  >  NC_014034/2747886‑2747985 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 28 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG