New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3727222 =	290 (1.270)	2 (0.010)	2/186	28.7	0.01	coding (656/828 nt)	RCAP_rcc03522	flagellar protein
	?	NC_014034	3727247 =	264 (1.080)					coding (631/828 nt)	RCAP_rcc03522	flagellar protein
Rejected: Position hash score below cutoff.

CTCAGCACGGTGATGCGGACGGCCCTTGGCCTGCCCGAAAGCGTCAGCTCGCTGGATGTCGATCAGCAGCTGGTCATCTATACCCAGAAGGCGAAATCCGTTCTGGG....................................................................................................  <  NC_014034/3727328‑3727222 ....................................................................................................TTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCAC  >  NC_014034/3727247‑3727346                                                                                                                                                                                                                                               CTGCCCGAAAGCGTCAGCTCGCTGGATGTCGATCAGCAGCTGGTCATCTATACCCAGAAGGCGAAATCCGTTCTGGGTATAGATGACCAGCTGCTGATCGc                                                                              >  1:1742610/1‑100 (MQ=255)                                   CCGAAAGCGTCAGCTCGCTGGATGTCGATCAGCAGCTGGTCATCTATACCCAGAAGGCGAAATCCGTTCTGGGTATAGATGACCAGCTGCTGATCGACATC                                                                          <  2:1742480/101‑1 (MQ=255)                                                                                                                                                                                                                 CTCAGCACGGTGATGCGGACGGCCCTTGGCCTGCCCGAAAGCGTCAGCTCGCTGGATGTCGATCAGCAGCTGGTCATCTATACCCAGAAGGCGAAATCCGTTCTGGG....................................................................................................  <  NC_014034/3727328‑3727222 ....................................................................................................TTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCAC  >  NC_014034/3727247‑3727346 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG