New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3727222 =290 (1.270)2 (0.010) 2/186 28.7 0.01 coding (656/828 nt) RCAP_rcc03522 flagellar protein
?NC_014034 3727247 = 264 (1.080)coding (631/828 nt) RCAP_rcc03522 flagellar protein
Rejected: Position hash score below cutoff.

Only 100 of 302 total aligned reads displayed.

TGCGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCACC  >  NC_014034/3727147‑3727347
                                                                                                    |                                                                                                    
tGCGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGt                                                                                                      >  1:1514871/1‑101 (MQ=255)
tGCGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGt                                                                                                      >  2:2871728/1‑101 (MQ=255)
ggCGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGt                                                                                                      <  2:4067486/100‑1 (MQ=255)
  cGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGtat                                                                                                    <  2:2429950/101‑1 (MQ=255)
  cGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGtat                                                                                                    <  1:2395962/101‑1 (MQ=255)
  cGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGtat                                                                                                    <  2:4251924/101‑1 (MQ=255)
   gAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGtata                                                                                                   <  1:4164147/101‑1 (MQ=255)
    aGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAg                                                                                                  <  1:2636825/101‑1 (MQ=255)
    aGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAg                                                                                                  <  2:4292380/101‑1 (MQ=255)
    aGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAg                                                                                                  >  1:156745/1‑101 (MQ=255)
     ccgcAACAGATAAATCCGGATTGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGa                                                                                                 <  2:3822076/100‑1 (MQ=255)
        cACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGa                                                                                              >  2:576824/1‑101 (MQ=255)
         aCCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGAc                                                                                             >  2:3277253/1‑101 (MQ=255)
          ccAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGAcc                                                                                            <  1:1001137/101‑1 (MQ=255)
          ccAGATAAAGCCGGATGGTCTTCGCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGAcc                                                                                            <  2:4774495/101‑1 (MQ=255)
           cAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCa                                                                                           <  1:381941/101‑1 (MQ=255)
           cAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCa                                                                                           <  2:2678367/101‑1 (MQ=255)
            ataTAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAg                                                                                          >  1:3417276/3‑101 (MQ=255)
            aGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAg                                                                                          >  2:3459480/1‑101 (MQ=255)
              aTAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgct                                                                                        <  2:1809462/101‑1 (MQ=255)
              aTAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgct                                                                                        <  2:933619/101‑1 (MQ=255)
                aaaGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgctgc                                                                                      >  1:5047931/1‑101 (MQ=255)
                 aaGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgctgct                                                                                     >  2:2197408/1‑101 (MQ=255)
                 aaGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgctgct                                                                                     <  2:2796737/101‑1 (MQ=255)
                 aaGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAgctgct                                                                                     <  1:2335287/101‑1 (MQ=255)
                  aGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGctgctg                                                                                    >  1:3579398/1‑101 (MQ=255)
                  aGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGctgctg                                                                                    <  2:4534351/101‑1 (MQ=255)
                  aGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGctgctg                                                                                    <  2:1370781/101‑1 (MQ=255)
                   gCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGa                                                                                   >  2:4479713/1‑101 (MQ=255)
                    ccGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGAt                                                                                  <  1:1458662/101‑1 (MQ=255)
                     cGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATc                                                                                 <  2:4873363/101‑1 (MQ=255)
                     cGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATc                                                                                 <  1:2522765/101‑1 (MQ=255)
                     cGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATc                                                                                 <  2:121813/101‑1 (MQ=255)
                      ggATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCg                                                                                <  1:1173183/101‑1 (MQ=255)
                      ggATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCg                                                                                <  2:1117044/101‑1 (MQ=255)
                       gATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGa                                                                               >  1:3249126/1‑101 (MQ=255)
                        aTGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGAc                                                                              >  2:1481225/1‑101 (MQ=255)
                         tGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACa                                                                             >  2:4094441/1‑101 (MQ=255)
                          ggTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTTATCGACAt                                                                            <  2:2522357/101‑1 (MQ=255)
                          ggTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACAt                                                                            <  1:1136820/101‑1 (MQ=255)
                          ggTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACAt                                                                            <  1:4923633/101‑1 (MQ=255)
                          ggTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACAt                                                                            >  1:369161/1‑101 (MQ=255)
                            tcttctCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATcc                                                                          >  2:470199/1‑101 (MQ=255)
                             cttctCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCa                                                                         <  1:598779/101‑1 (MQ=255)
                              ttctCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAg                                                                        >  1:3978782/1‑101 (MQ=255)
                               tctcCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGc                                                                       >  2:234925/1‑101 (MQ=255)
                               tctcCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGc                                                                       >  1:1311607/1‑101 (MQ=255)
                               tctcCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGc                                                                       <  2:3711892/101‑1 (MQ=255)
                                ctcCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGca                                                                      <  1:4833381/101‑2 (MQ=255)
                                 tcCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGa                                                                     <  2:1570954/101‑1 (MQ=255)
                                  ccATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAg                                                                    >  2:208158/1‑101 (MQ=255)
                                  ccATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAg                                                                    >  1:3507222/1‑101 (MQ=255)
                                     tCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTg                                                                 >  1:4650731/1‑101 (MQ=255)
                                       aCCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGAc                                                               <  1:73474/101‑1 (MQ=255)
                                        ccGCGCTGTACGAGAAGGTGGACAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACg                                                              >  2:179005/1‑101 (MQ=255)
                                         cgcgCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGc                                                             >  2:2834756/1‑101 (MQ=255)
                                           cgcTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCtt                                                           <  2:2964736/101‑1 (MQ=255)
                                            gcTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCttt                                                          <  1:2251479/101‑1 (MQ=255)
                                             cTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTc                                                         <  2:3373099/101‑1 (MQ=255)
                                             cTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTc                                                         <  2:79262/101‑1 (MQ=255)
                                                tCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCggg                                                      <  2:1711597/101‑1 (MQ=255)
                                                 ccGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGc                                                     >  1:4093803/1‑101 (MQ=255)
                                                    agaAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAgg                                                  >  2:2763524/1‑101 (MQ=255)
                                                    agaAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAgg                                                  <  1:1833325/101‑1 (MQ=255)
                                                    agaAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAgg                                                  <  2:4009884/101‑1 (MQ=255)
                                                     gaAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGc                                                 >  2:3016857/1‑101 (MQ=255)
                                                       aGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCa                                               <  2:3565740/101‑1 (MQ=255)
                                                       aGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCa                                               <  2:3592861/101‑1 (MQ=255)
                                                       aGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCa                                               <  2:3908568/101‑1 (MQ=255)
                                                         gTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAg                                             >  1:3923252/1‑101 (MQ=255)
                                                          tGGAGAAATCGGAACTCCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAgg                                            >  1:4414746/1‑101 (MQ=255)
                                                              gaAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCg                                        >  1:2892245/1‑101 (MQ=255)
                                                                 aTCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTcc                                     >  1:4509798/1‑101 (MQ=255)
                                                                 aTCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGG.CAAGGGCCGTCCg                                    <  2:114077/101‑1 (MQ=255)
                                                                   cGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGc                                   <  2:4324044/101‑1 (MQ=255)
                                                                      aaCTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATc                                >  1:4757574/1‑101 (MQ=255)
                                                                       aCTGCCCAGAACGGATTTCGCCTTGTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCa                               <  1:179021/101‑1 (MQ=255)
                                                                        cTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCAc                              <  2:196457/101‑1 (MQ=255)
                                                                           cccAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGt                           <  1:1696973/101‑1 (MQ=255)
                                                                           cccAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGt                           <  1:2085969/101‑1 (MQ=255)
                                                                             cAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCAGCATCACCGTGc                         <  1:2729187/101‑1 (MQ=255)
                                                                              aGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCt                        <  1:967246/101‑1 (MQ=255)
                                                                              aGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCt                        >  1:4879537/1‑101 (MQ=255)
                                                                               gAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTg                       >  1:936565/1‑101 (MQ=255)
                                                                               gAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTg                       <  2:62059/101‑1 (MQ=255)
                                                                                 aCGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAg                     <  1:3296026/101‑1 (MQ=255)
                                                                                  cGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGc                    <  2:5047601/101‑1 (MQ=255)
                                                                                   ggATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCg                   <  2:1691228/101‑1 (MQ=255)
                                                                                    gATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGa                  <  2:4904446/101‑1 (MQ=255)
                                                                                      tttCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACt                >  2:2141734/1‑101 (MQ=255)
                                                                                        tCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTc              <  1:2687736/101‑1 (MQ=255)
                                                                                         cGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCTTCACCGTGCTGAGCGACTTCg             <  1:2871941/101‑1 (MQ=255)
                                                                                           ccTTCTGGGTATAGATGACCAGCTGGTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAAGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGGCTTCGAg           >  2:865603/1‑101 (MQ=255)
                                                                                              tCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGATCGACTTCGAGCCg        <  2:4592212/101‑1 (MQ=255)
                                                                                              tCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCg        >  2:522228/1‑101 (MQ=255)
                                                                                              tCTGGGTATAGATGACCAGCTGCTGATCGACATACAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCg        <  1:4308345/101‑1 (MQ=255)
                                                                                               cTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGCCTTCGAGCCGa       >  1:4668294/1‑101 (MQ=255)
                                                                                                 gggTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATc     <  1:3459745/101‑1 (MQ=255)
                                                                                                   gTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCAc   <  2:4414427/101‑1 (MQ=255)
                                                                                                   gTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCAc   <  1:851492/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGCGAGCGCACCAGATAAAGCCGGATGGTCTTCTCCATCACCGCGCTGTCCGAGAAGGTGGAGAAATCGGAACTGCCCAGAACGGATTTCGCCTTCTGGGTATAGATGACCAGCTGCTGATCGACATCCAGCGAGCTGACGCTTTCGGGCAGGCCAAGGGCCGTCCGCATCACCGTGCTGAGCGACTTCGAGCCGATCACC  >  NC_014034/3727147‑3727347

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG