| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 1395651 | 262 (1.080) | 3 (0.010) | 3/198 | 28.5 | 0.01 | intergenic (+463/‑468) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| ? | NC_014034 | 1395722 = | 327 (1.330) | intergenic (+534/‑397) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 265 total aligned reads displayed.
CCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAC > NC_014034/1395552‑1395751
|
ccAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGc < 1:4186209/101‑1 (MQ=255)
cAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCg > 2:617980/1‑101 (MQ=255)
ccGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTgg < 2:4392568/101‑1 (MQ=255)
ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3246873/101‑1 (MQ=255)
ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:2714799/101‑1 (MQ=255)
ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1901938/101‑1 (MQ=255)
ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:2087794/1‑101 (MQ=255)
ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2124553/101‑1 (MQ=255)
gCCTGCTCGGTGCTCGCCCCGCGGGGTGGTGAATCGAAACCACCTTGCTGAT.G.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1581615/101‑1 (MQ=37)
ccTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:151356/101‑1 (MQ=255)
ccTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:680470/101‑1 (MQ=255)
accgcgtcgCTCCCCCCGCGGGGGCGTGGATCGTAACCTCGATGATCAA.A.TCCGCAATCGGCCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:4325791/97‑1 (MQ=2)
cTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGGGTGGGTCGAAAc > 2:2696552/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt > 1:4046451/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc > 2:2772699/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc > 1:2878334/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc < 2:2287277/101‑1 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCt > 1:4747356/1‑101 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCt < 2:1038812/101‑1 (MQ=255)
tcgCCCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTCACGTT..TTGGGAC.G..GAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCtt < 1:2903929/101‑2 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGc > 1:3744950/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.CAAGCGTCGCTCCCCCCGCGGGGGAGTGGCTGGAAACCTCTGCa > 2:4118483/1‑101 (MQ=38)
tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt > 2:1794229/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg > 2:2595049/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTa < 1:2645655/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTa < 1:1496785/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg < 1:4438630/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt > 1:4588781/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAGCCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTc < 1:2499542/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg < 1:2212940/101‑1 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc > 2:2679407/1‑101 (MQ=255)
gggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggcgg > 1:3949122/1‑101 (MQ=255)
gggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggcgg > 1:5004877/1‑101 (MQ=255)
ggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCgg.g > 1:2617682/1‑101 (MQ=255)
cGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCa > 2:299656/1‑101 (MQ=255)
gTGGATCGAAGCCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAg > 1:4364701/1‑101 (MQ=255)
tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAgg < 2:2370631/101‑2 (MQ=255)
ggATCGAAAACACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGtt > 2:3704904/1‑101 (MQ=255)
gATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTc < 2:3362515/101‑1 (MQ=255)
cGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.g > 2:1916211/1‑101 (MQ=255)
cGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.g < 2:1740618/101‑1 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc > 2:2026657/1‑101 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc > 2:3124007/1‑101 (MQ=255)
gAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gc < 1:522476/101‑1 (MQ=255)
aaaCCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.Gcc < 2:725296/101‑1 (MQ=255)
tGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCt < 2:2908564/101‑1 (MQ=255)
gCGGAT.T.GTCTCTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc < 1:2165062/101‑1 (MQ=255)
gCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc > 1:2694637/1‑101 (MQ=255)
gCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc > 1:823628/1‑101 (MQ=255)
cGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcc < 1:1131952/101‑1 (MQ=255)
ggAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccc > 1:2291507/1‑101 (MQ=255)
gAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 1:3359698/1‑101 (MQ=255)
gAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccc > 1:2536429/1‑101 (MQ=255)
t.t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:4331844/101‑1 (MQ=255)
t.t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccccc > 2:4413192/1‑101 (MQ=255)
t.t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccccc > 2:837391/1‑101 (MQ=255)
t.t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGGTCGA.GCCGCAGTCGCTcccccc > 2:4830026/1‑101 (MQ=255)
t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg > 2:1144047/1‑101 (MQ=255)
t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg > 1:2016966/1‑101 (MQ=255)
t.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg < 2:1076791/101‑1 (MQ=255)
gTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:4026298/101‑1 (MQ=255)
cTTTC.GCGGGGC.GAGGCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg < 2:4204907/101‑1 (MQ=255)
cTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg > 2:3282321/1‑101 (MQ=255)
tttC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggggg > 2:4564534/1‑101 (MQ=255)
ttC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc > 1:1020281/1‑101 (MQ=255)
c.gcgGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt > 1:4545643/1‑101 (MQ=255)
cgGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg < 2:3615212/101‑1 (MQ=255)
cgGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg > 2:4949503/1‑101 (MQ=255)
ggC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:3128158/1‑101 (MQ=255)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3481515/7‑101 (MQ=2)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt > 1:891788/7‑101 (MQ=2)
gC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:3793015/1‑101 (MQ=255)
ggacgtggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.TACACCGGGGCTCTGGGC.ACGGTTTGG.GACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1079310/94‑1 (MQ=2)
ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2527541/96‑1 (MQ=2)
c.GAAGCGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTTGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGGTCGa > 1:4260684/1‑101 (MQ=255)
gctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:4118330/4‑101 (MQ=2)
aaGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCGGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:2088558/101‑1 (MQ=255)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:2233681/1‑101 (MQ=255)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:3435013/1‑101 (MQ=255)
aGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:2762736/101‑1 (MQ=255)
gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt < 1:1695066/101‑1 (MQ=255)
ccgcGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 2:1389154/98‑1 (MQ=255)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGA.TACCGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca > 1:4298074/1‑100 (MQ=2)
ccGCGCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:3641943/100‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATg < 2:3657155/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGGGGGGGTCGAAAcacccatg > 1:1714131/1‑94 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg < 2:1599850/100‑1 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg < 2:216899/100‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGAt < 1:2087672/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGAt < 1:299709/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc < 1:3567444/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc > 1:1235156/1‑101 (MQ=255)
ggggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcg < 1:3230763/100‑1 (MQ=255)
gggggGCTGGACCGAAATATCTGCGTGTAGTCGGGGG.GCTGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcgc < 2:3835088/101‑1 (MQ=25)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCa > 2:3915629/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaa < 1:3254446/101‑1 (MQ=255)
gggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaa < 2:351360/101‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaaa > 1:728828/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaaa > 2:521171/1‑101 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc < 2:2212242/101‑1 (MQ=255)
|
CCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTC.GCGGGGC.GAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAC > NC_014034/1395552‑1395751
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|