BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1395651	262 (1.080)	3 (0.010)	3/198	28.5	0.01	intergenic (+463/‑468)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	1395722 =	327 (1.330)	3 (0.010)	3/198	28.5	0.01	intergenic (+534/‑397)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 336 total aligned reads displayed.


CGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGAC  >  NC_014034/1395622‑1395822


gggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg                                                                                                              <  2:2146594/100‑1 (MQ=255)


gggggCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg                                                                                                              <  1:1100674/100‑1 (MQ=255)


 ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa                                                                                                             >  1:2585481/1‑101 (MQ=255)


 ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa                                                                                                             <  1:3762838/101‑1 (MQ=255)


   ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATTTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                                                           <  2:3336160/101‑1 (MQ=255)


   ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                                                           <  1:1498504/101‑1 (MQ=255)


    ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                                                           <  2:1007073/96‑1 (MQ=2)


    ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                                                           <  1:3172332/96‑1 (MQ=2)


    ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                                                           <  1:2234570/96‑1 (MQ=2)


     cGAAGCGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTTGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGGTCGa                                                                                                         >  1:4260684/1‑101 (MQ=255)


     cGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                                                         >  1:721828/1‑101 (MQ=255)


     cGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                                                         <  1:3419938/101‑1 (MQ=255)


      gctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                                                         >  1:4118330/4‑101 (MQ=2)


       ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                                                        <  1:2523865/99‑1 (MQ=2)


        tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGGTATGGCGTCGGTGTCA.GGTTTTCCA.GCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                                                       >  2:804286/2‑101 (MQ=2)


        gtggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.TACACCGGGGCTCTGGT..G.ACGGTTTGG.GGCGGAGTCGCTCCCCCCGCGGGGGCGGGGATCGAAAcg                                                                                                     >  2:3242960/4‑100 (MQ=2)


        aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                                                      >  2:393591/1‑101 (MQ=255)


         gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt                                                                                                     <  1:1695066/101‑1 (MQ=255)


         gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                                                      <  2:2927946/101‑1 (MQ=2)


             cccTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTa                                                                                                <  2:1125061/99‑1 (MQ=255)


              gCTCCCCCCGCGGGGGCGTGGATCGAAACCCCCGGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatcga                                                                                                 <  1:4308045/101‑6 (MQ=2)


                tCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGGGGGGGTCGAAAcacccatg                                                                                               >  1:1714131/1‑94 (MQ=2)


                cccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATgg                                                                                             <  2:1599850/100‑1 (MQ=255)


                  cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAt                                                                                           <  1:3621762/101‑1 (MQ=255)


                  cccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAt                                                                                           <  1:2087672/101‑1 (MQ=255)


                    cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt                                                                                         <  1:2805292/101‑1 (MQ=255)


                      cgcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.g..g                                                                                    >  2:2836856/1‑101 (MQ=255)


                        ggggggCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..gcg                                                                                  <  1:3230763/100‑1 (MQ=255)


                         gggggCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..gcgc                                                                                 <  1:5029480/101‑1 (MQ=255)


                           gggCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCaa                                                                               <  2:351360/101‑1 (MQ=255)


                              cGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACg                                                                            >  2:4930133/1‑101 (MQ=255)


                                tGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..a                                                                        >  1:1350671/1‑101 (MQ=255)


                                 ggATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..aa                                                                       >  2:2285565/1‑101 (MQ=255)


                                  gATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..aaa                                                                      >  2:3665253/1‑101 (MQ=255)


                                  gATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..aaa                                                                      <  1:2981204/101‑1 (MQ=255)


                                   aTCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAg                                                                     <  2:3590980/101‑1 (MQ=255)


                                     cGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTc                                                                   <  2:2886316/101‑1 (MQ=255)


                                      gAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCt                                                                  >  2:1940270/1‑101 (MQ=255)


                                       aaaCATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.g                                                                <  1:220889/101‑1 (MQ=255)


                                       aaaCATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.g                                                                <  1:89249/101‑1 (MQ=255)


                                        aaCATCTGCATGTGGTGGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.g.t                                                              <  1:2106180/101‑1 (MQ=255)


                                          cATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.g.tcg                                                            >  2:4155464/1‑101 (MQ=255)


                                                   gTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccc                                                   >  1:3087414/1‑101 (MQ=255)


                                                   gTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccc                                                   <  2:4599327/101‑1 (MQ=255)


                                                   gTAGTCGGCG..G.GAAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccc                                                   <  2:4215985/101‑1 (MQ=255)


                                                     cggcggcg..g.GCAGTTCGA.CCCGCTGTCGCTGCCCCCGCGGGGGCGTGGATCTAAACT.GGTTTGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc                                                 <  1:798152/98‑1 (MQ=38)


                                                     aGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc                                                 >  2:55441/1‑101 (MQ=255)


                                                         ggcg..g.GCAGTGCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCgg                                             <  2:3864247/101‑1 (MQ=255)


                                                            g..g.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCggggg                                          >  1:4889940/1‑101 (MQ=255)


                                                            g..g.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCggggg                                          >  1:4274480/1‑101 (MQ=255)


                                                                    gTTGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTgg                                     <  1:3915921/101‑1 (MQ=255)


                                                                      tCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGAt                                   >  1:2637204/1‑101 (MQ=255)


                                                                      tCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGAt                                   <  1:3604172/101‑1 (MQ=255)


                                                                        gA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                 <  1:4511956/101‑1 (MQ=255)


                                                                         aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGa                                    <  1:3662728/95‑1 (MQ=2)


                                                                          cgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                  <  2:5018250/94‑1 (MQ=0)


                                                                          agattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGAt                                   >  2:1988707/6‑101 (MQ=2)


                                                                           gcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                 <  1:851139/95‑1 (MQ=0)


                                                                           gattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.GGGTCGCTCCCCCCGCGGGGGCGTGGATc                                  >  2:506593/5‑101 (MQ=2)


                                                                           gCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                               <  2:4364384/101‑1 (MQ=255)


                                                                           atctcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATc                                  <  1:4612303/97‑1 (MQ=2)


                                                                            attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCG..GCGATCTGGGT.AAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                 >  1:2002408/4‑101 (MQ=2)


                                                                            attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                 <  1:4809219/98‑1 (MQ=2)


                                                                             ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                <  2:1436274/99‑1 (MQ=2)


                                                                             ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                <  2:4752545/99‑1 (MQ=2)


                                                                              tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCgca                               >  2:2672616/2‑99 (MQ=2)


                                                                              tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                               >  2:3778276/2‑101 (MQ=2)


                                                                              gCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                            >  2:273323/1‑101 (MQ=255)


                                                                               tggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                             >  2:2308317/3‑101 (MQ=2)


                                                                                ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                            >  1:130646/2‑101 (MQ=2)


                                                                                aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                             <  1:2866293/101‑1 (MQ=2)


                                                                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc                         >  2:4007226/1‑101 (MQ=255)


                                                                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg                        >  2:123139/1‑101 (MQ=255)


                                                                                   cGCTCCCCCCGCGGGGGTGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat                         <  2:4539446/101‑3 (MQ=2)


                                                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacc                          <  1:1849072/101‑4 (MQ=2)


                                                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacc                          >  2:490366/1‑98 (MQ=2)


                                                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat                         <  1:4949381/101‑3 (MQ=2)


                                                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcgg                       <  1:4564855/101‑1 (MQ=255)


                                                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg                        <  1:1057341/101‑4 (MQ=2)


                                                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCA.GATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg                        >  2:3416623/1‑98 (MQ=2)


                                                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggc                      <  1:618059/101‑1 (MQ=255)


                                                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggc                      >  2:4992675/1‑101 (MQ=255)


                                                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcggc                      >  1:3488700/1‑101 (MQ=255)


                                                                                       ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc                      >  1:2159312/1‑94 (MQ=0)


                                                                                       ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc                      >  2:1542296/1‑94 (MQ=0)


                                                                                       ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc                      >  2:1887599/1‑94 (MQ=0)


                                                                                       ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACAT.C..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc                      <  2:4338879/101‑8 (MQ=0)


                                                                                       ccccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg                   >  1:3330049/1‑101 (MQ=255)


                                                                                        cccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGa                  <  2:3727125/101‑1 (MQ=255)


                                                                                         ccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAg                 <  1:3810210/101‑1 (MQ=255)


                                                                                          cccGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTTAGt                <  2:4274163/101‑1 (MQ=255)


                                                                                               gggggCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCa           >  1:2319675/1‑101 (MQ=255)


                                                                                                ggggCGTGGATCGAAACT.GGTACGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAg          >  2:2219794/1‑101 (MQ=255)


                                                                                                 gggCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGt         <  2:2090876/101‑1 (MQ=255)


                                                                                                   gCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGa       <  2:2694452/101‑1 (MQ=255)


                                                                                                    cGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGAt      <  1:2384191/101‑1 (MQ=255)


                                                                                                      tGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg    <  1:1196169/101‑1 (MQ=255)


                                                                                                      tGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg    <  1:274270/101‑1 (MQ=255)


                                                                                                       ggATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGa   <  1:2685758/101‑1 (MQ=255)


                                                                                                        gATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGAc  <  2:4838469/101‑1 (MQ=255)


CGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCT.G..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGAC  >  NC_014034/1395622‑1395822

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG