New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1478517 =225 (1.000)23 (0.100) 6/184 24.8 0.11 intergenic (+5/+138) RCAP_rcc01372/RCAP_rcc01373 ABC transporter ATP‑binding protein/RpiR family transcriptional regulator
?NC_014034 1640014 = 132 (0.540)intergenic (+94/‑51) mccB/mccA methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 243 total aligned reads displayed.

GACACGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTGG  >  NC_014034/1478417‑1478617
                                                                                                    |                                                                                                    
 acacGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCgg                                                                                                     >  1:4932537/1‑101 (MQ=255)
     gTTGAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgc                                                                                                 <  1:2178152/101‑1 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGGgggggg                                                                                                 >  1:4575494/1‑100 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgc                                                                                                 >  2:3661638/1‑101 (MQ=255)
       tCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgggc                                                                                               >  2:202208/1‑101 (MQ=255)
       tCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgcgc                                                                                               >  1:2316360/1‑101 (MQ=255)
         aacaacAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCggggggggtg                                                                                             >  1:1992473/1‑96 (MQ=255)
           caacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGcc                                                                                           >  1:3948126/1‑101 (MQ=255)
            aacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGccc                                                                                          >  1:789086/1‑101 (MQ=255)
             acaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGcccc                                                                                         <  2:1622476/101‑1 (MQ=255)
              caGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGccccc                                                                                        <  2:446955/101‑1 (MQ=255)
              caGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGccccc                                                                                        >  2:1244407/1‑101 (MQ=255)
               aGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCg                                                                                       >  2:1970986/1‑101 (MQ=255)
                gCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGc                                                                                      >  2:2326726/1‑101 (MQ=255)
                 ccATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCa                                                                                     <  2:4961468/101‑1 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGGTGCCCCCGCAc                                                                                    >  1:3605534/1‑101 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAc                                                                                    >  2:4619993/1‑101 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAc                                                                                    <  1:2270184/101‑1 (MQ=255)
                   aTGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGGGCCGcccccccccc                                                                                   >  1:1057035/1‑96 (MQ=255)
                    tGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAccc                                                                                  >  2:1457873/1‑101 (MQ=255)
                     gccgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAcccc                                                                                 <  1:82640/101‑1 (MQ=255)
                     gccgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAcccc                                                                                 >  2:651745/1‑101 (MQ=255)
                      ccgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAccccc                                                                                <  2:547570/101‑1 (MQ=255)
                       cgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCg                                                                               <  2:3545233/101‑1 (MQ=255)
                          gccgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCggcg                                                                            >  2:2492225/1‑99 (MQ=255)
                           ccgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGat                                                                           <  1:4296452/101‑1 (MQ=255)
                           ccgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGat                                                                           <  1:942785/101‑1 (MQ=255)
                            cgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGGGCTGCCCCCCCCCCCCCcgggga                                                                          >  1:4780488/1‑98 (MQ=255)
                            cgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCCGGata                                                                          >  2:4227850/1‑101 (MQ=255)
                             gccgcAGGTGGGGACCGAGGTCACGCTGGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGatat                                                                         <  1:5051494/101‑1 (MQ=255)
                             gccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCTCACCCCCGGGatat                                                                         >  1:1714221/1‑101 (MQ=255)
                               cgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCCGGATAttt                                                                       >  2:116420/1‑101 (MQ=255)
                                gcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTg                                                                      <  2:2785485/101‑1 (MQ=255)
                                 cAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTgg                                                                     <  2:4327793/101‑1 (MQ=255)
                                 cAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTgg                                                                     <  1:3539038/101‑1 (MQ=255)
                                   ggTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTTATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAg                                                                   <  2:3783466/101‑1 (MQ=255)
                                    gTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGc                                                                  >  2:2690934/1‑101 (MQ=255)
                                      ggggACCGAGGTCACGCTCGGCCTCAATGCGGACGATCTGCTGGGGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGGGATTTTGAGCaa                                                                >  2:3501435/1‑101 (MQ=38)
                                        ggACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGa                                                              <  1:2394965/101‑1 (MQ=255)
                                         gACCGGGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTTCCCCCGCCCCCCCGGGATATTTGGAGCAAGAt                                                             <  1:754325/101‑1 (MQ=255)
                                          aCCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGGTATTTGGAGCAAGATg                                                            >  1:1837448/1‑101 (MQ=255)
                                            ttccgatctgCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGaa                                                          <  2:2518164/92‑1 (MQ=255)
                                             ggggTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGaaa                                                         <  2:4144799/99‑1 (MQ=255)
                                              aGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAg                                                        <  2:4780165/101‑1 (MQ=255)
                                               ggTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGc                                                       <  1:1071129/101‑1 (MQ=255)
                                               ggTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGc                                                       <  1:2493689/101‑1 (MQ=255)
                                                gTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGGGCGGCCCCCGCCCCCCCCGGCTATTTGGAGCCAGATGAAAGCa                                                      >  2:2219859/1‑101 (MQ=255)
                                                       tCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCGGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTg                                               <  2:3964570/101‑1 (MQ=255)
                                                          gCCTTAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCgg                                            <  1:3671461/101‑1 (MQ=255)
                                                             tCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCCCCCCCGTGATACGTGGAGGAAGATAAAATCACGACCTGCGGttg                                         >  2:4767584/1‑100 (MQ=37)
                                                             tCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGttt                                         <  1:2894622/101‑1 (MQ=255)
                                                              cAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGtttt                                        >  1:406954/1‑101 (MQ=255)
                                                              cAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGtttt                                        >  1:5033521/1‑101 (MQ=255)
                                                              cAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGtttt                                        <  1:4755800/101‑1 (MQ=255)
                                                              cAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAACACGATCTGCGGtttt                                        >  1:1934021/1‑101 (MQ=255)
                                                               aaTGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGGGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAAATGAAAGCACGATCTGCGGGTTTc                                       >  1:3255981/1‑101 (MQ=255)
                                                               aaTGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTc                                       <  2:1822925/101‑1 (MQ=255)
                                                                 tGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAt                                     <  1:1971130/101‑1 (MQ=255)
                                                                   cGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAttt                                   <  1:4030269/101‑1 (MQ=255)
                                                                   cGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAttt                                   <  1:2564358/101‑1 (MQ=255)
                                                                    ggCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTa                                  <  2:2899663/101‑1 (MQ=255)
                                                                     gCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTAt                                 <  2:1351676/101‑1 (MQ=255)
                                                                       cGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCt                               <  1:1208658/101‑1 (MQ=255)
                                                                        gATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCtt                              <  1:343645/101‑1 (MQ=255)
                                                                         atgtgctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTg                             <  2:3186739/98‑1 (MQ=255)
                                                                         aTCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCCCCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTTTTTTg                             >  1:1000768/1‑101 (MQ=255)
                                                                         aTCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTg                             <  2:4759922/101‑1 (MQ=255)
                                                                         aTCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTg                             >  1:3069161/1‑101 (MQ=255)
                                                                            tgctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCtt                          >  1:264864/1‑101 (MQ=255)
                                                                            tgctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCtt                          <  1:4836921/101‑1 (MQ=255)
                                                                             gctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTc                         >  1:1582872/1‑101 (MQ=255)
                                                                             gctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTc                         <  1:202242/101‑1 (MQ=255)
                                                                             gctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTc                         <  2:3264912/101‑1 (MQ=255)
                                                                              ctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCGCGCACCTCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCa                        <  2:1995791/101‑1 (MQ=255)
                                                                              ctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCa                        <  1:4055298/101‑1 (MQ=255)
                                                                                ggTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCaaa                      <  2:1746059/101‑1 (MQ=255)
                                                                                  tGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAata                    <  1:4454321/101‑1 (MQ=255)
                                                                                  tGATCGGCGCCTCAGGGCGGGGGCGCTGGCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAata                    <  2:2167700/101‑1 (MQ=255)
                                                                                   gATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAatat                   >  2:532168/1‑101 (MQ=255)
                                                                                   gATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAatat                   <  1:2220014/101‑1 (MQ=255)
                                                                                   gATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAatat                   <  2:4101097/101‑1 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCNGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                  <  1:651834/101‑1 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                  <  1:1181957/101‑1 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                  >  1:1253132/1‑101 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                  <  1:340212/101‑1 (MQ=255)
                                                                                     tCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATcc                 <  1:4688758/101‑1 (MQ=255)
                                                                                      cGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATccc                <  2:239617/101‑1 (MQ=255)
                                                                                       ggCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCg               <  2:3408918/101‑1 (MQ=255)
                                                                                          gcCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCgggg            >  1:3027473/1‑101 (MQ=255)
                                                                                           ccTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCggggg           >  1:1288486/1‑101 (MQ=255)
                                                                                             tGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGt         <  2:749027/101‑1 (MQ=255)
                                                                                              gAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTg        >  1:4161940/1‑101 (MQ=255)
                                                                                              gAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTg        <  2:2834554/101‑1 (MQ=255)
                                                                                               aGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGa       <  2:1563242/101‑1 (MQ=255)
                                                                                                 ggCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAAt     <  1:1588954/101‑1 (MQ=255)
                                                                                                  gCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAAtt    <  2:1137017/101‑1 (MQ=255)
                                                                                                  gCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAAtt    >  1:3806205/1‑101 (MQ=255)
                                                                                                   cGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTg   >  2:4299432/1‑101 (MQ=255)
                                                                                                   cGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTg   <  2:5008674/101‑1 (MQ=255)
                                                                                                    gggggCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTgg  <  1:1480112/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GACACGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTGG  >  NC_014034/1478417‑1478617

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG