| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1478517 = | 225 (1.000) | 23 (0.100) | 6/184 | 24.8 | 0.11 | intergenic (+5/+138) | RCAP_rcc01372/RCAP_rcc01373 | ABC transporter ATP‑binding protein/RpiR family transcriptional regulator |
| ? | NC_014034 | 1640014 = | 132 (0.540) | intergenic (+94/‑51) | mccB/mccA | methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 143 total aligned reads displayed.
ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGG > NC_014034/1639927‑1640112
|
aTGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCCGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCCCTTcc > 1:589965/1‑101 (MQ=21)
cTCCGGCGGGGGTATTTGGGGCAAGATGAAACCCATCCCTTTTATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCCCCCCTTCCGccc > 2:1497780/1‑100 (MQ=18)
tCCGGCGGGGATATTTTGGGCAAGATGAAACCCCTCCCTTTTATCTTGCCCCCAATATCCCGGGGGGCCCGG..G....GGGGAG.....CG...CCCCCCCCCACTTCCCcccc > 2:3979492/1‑99 (MQ=16)
cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGc > 2:1095931/1‑101 (MQ=25)
ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCa > 2:2004887/1‑101 (MQ=25)
gggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAg > 1:3207545/1‑101 (MQ=21)
ggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc > 2:34875/1‑101 (MQ=25)
ggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgc > 1:1455477/1‑101 (MQ=25)
gATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcg > 1:1918658/1‑101 (MQ=25)
atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAgcgc > 2:879019/1‑101 (MQ=21)
atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTCCCCCCCCGGGCCAgcgc > 1:3144411/1‑101 (MQ=18)
atTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGccc > 1:3844587/1‑101 (MQ=25)
ttggggaCAAGATAACCCCCATCCTTTTCTTCTCGCCCAAAATACCCGGGGGCGCCGGG..GGGGCG....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc < 2:3395228/98‑1 (MQ=255)
ttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg > 2:562803/1‑101 (MQ=21)
ttGGGGCAAGATAAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg > 1:2743243/1‑101 (MQ=21)
tGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg > 2:1029225/1‑101 (MQ=25)
tGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg > 2:3809955/1‑101 (MQ=25)
ggggCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc > 2:1244857/1‑101 (MQ=25)
ggggCAAGATAAACCCCATCCCTTTCCTCTCCCCCAAAATCTCCGGGGGGGCCGGG..G....G....GGC...CGCC.CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc < 2:651835/101‑1 (MQ=255)
gaaaaaaaaaCCCCTCCCTTTCCTCTTGCCCCAAAAGCGCGGGGGGGCCCGG..G....G....GGCCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt < 1:1392614/94‑1 (MQ=255)
cAAGATGACCCCCCCCCTTTCCATTTTCCCCAAAATACCCGGGGGGGCCGGG..G....G....GGCAC.CC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt < 2:2438211/101‑1 (MQ=255)
cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 2:328209/1‑101 (MQ=25)
cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 1:754348/1‑101 (MQ=21)
cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 1:3071358/1‑101 (MQ=25)
cAAGATGAAACCCATCCATTTCATCTTGCCCCAAATATACCGGGGGGCCCGGTAG....GAA..G.....CG...CCCTCCGCCACTTCCGCCACACGGCAGCGCCCCGGccccg > 2:1867362/1‑98 (MQ=19)
aaGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 1:2719933/1‑101 (MQ=25)
aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCTCCACGGGGCAGCGCCCCGGCCGTTgc > 2:3086703/1‑100 (MQ=21)
aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa > 2:1940625/1‑101 (MQ=25)
aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa > 2:3506602/1‑101 (MQ=25)
aTGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg > 2:2295140/1‑101 (MQ=21)
aTGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg > 2:1933205/1‑101 (MQ=25)
tGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 2:3314490/1‑101 (MQ=25)
gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACgca > 2:3780852/1‑99 (MQ=21)
gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 1:2726290/1‑101 (MQ=25)
gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 1:1556058/1‑101 (MQ=25)
gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 2:3328186/1‑101 (MQ=25)
gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 1:4830120/1‑101 (MQ=25)
aaaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg > 2:3742600/1‑101 (MQ=25)
aaaCCAATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGACACGGGGCAGCGCCCCGGCCGTTGACGAAg > 1:324899/1‑101 (MQ=21)
aaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 2:3342295/1‑101 (MQ=25)
aaCCCATCCCTTTCATATTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 2:2803272/1‑101 (MQ=25)
accccccccTTTTCTCTTTCCCCAAAATTCCCGGGGGGGCGGG..G....G....GGC...CGGCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg < 2:240497/95‑1 (MQ=255)
ccccccTTTCATCTCG.CCCAAAAGCCCCGGGGGGCCCGG..G....G....GGGCCCCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc < 1:1580261/98‑1 (MQ=255)
cATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc > 2:4534235/1‑101 (MQ=25)
cATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc > 2:4295738/1‑101 (MQ=25)
tCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg > 2:526029/1‑101 (MQ=25)
tCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg > 2:824212/1‑101 (MQ=25)
cccTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc > 2:3767347/1‑101 (MQ=25)
cccTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc > 1:3600341/1‑101 (MQ=25)
cccTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGCTGACGAAGGAGACcgc > 2:27481/1‑101 (MQ=21)
ccTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg > 1:262078/1‑101 (MQ=25)
tttCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt > 1:2304764/1‑101 (MQ=25)
ttCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 2:4817480/1‑101 (MQ=25)
ttCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 1:4605961/1‑101 (MQ=25)
ttCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 1:5050196/1‑101 (MQ=25)
tCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt > 2:1231406/1‑101 (MQ=25)
tCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt > 1:4055126/1‑101 (MQ=25)
cATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt > 1:2158369/1‑101 (MQ=25)
aTCTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt > 1:4745977/1‑101 (MQ=25)
cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGCCCGCGATGTTTCa > 1:3713336/1‑101 (MQ=25)
cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa > 1:1392896/1‑101 (MQ=25)
cTTGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa > 1:3373030/1‑101 (MQ=25)
ttGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 1:395581/1‑101 (MQ=25)
ttGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 1:34394/1‑101 (MQ=25)
ttGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 2:2202895/1‑101 (MQ=25)
ttGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 2:2609102/1‑101 (MQ=25)
ttGCCACAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 2:268856/1‑101 (MQ=25)
tGCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa > 1:90874/1‑101 (MQ=25)
gCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa > 1:2966012/1‑101 (MQ=25)
gCCCCAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa > 2:1133990/1‑101 (MQ=25)
ccccAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCCCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg > 1:921750/1‑101 (MQ=25)
ccAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCCCCACTTCCGCCACGGGGAAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGAt > 1:639245/1‑101 (MQ=25)
cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGCTGTTTCAAAAGCTc > 2:1458157/1‑101 (MQ=25)
cAAATATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc > 1:4346828/1‑101 (MQ=25)
aaaTATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATct > 1:494676/1‑100 (MQ=25)
aaaTATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc > 1:37101/1‑101 (MQ=25)
aaTATCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt > 1:1001191/1‑101 (MQ=25)
atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg > 1:1327630/1‑101 (MQ=37)
atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg > 1:2696537/1‑101 (MQ=37)
atatCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGAAGACCGCGATGTTTCAAAAGATCCTg > 2:4831687/1‑101 (MQ=25)
tCCCGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc > 1:1326618/1‑101 (MQ=37)
ccGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTCGGCGAAGGAGGCCGGGATCTTTCAAAAGATCCTCAtatc > 1:1222201/1‑98 (MQ=16)
cGGGGGGCCCGG..G....GGGCAG.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc > 2:677817/1‑101 (MQ=37)
cggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc > 1:209572/10‑101 (MQ=255)
ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 2:4598665/9‑101 (MQ=255)
ggggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 1:4039338/9‑101 (MQ=255)
gggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga > 1:2757361/8‑101 (MQ=255)
ggggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag > 1:4723963/7‑101 (MQ=255)
gggcag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga > 1:1274237/6‑101 (MQ=255)
ag.....cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc > 1:2351030/2‑101 (MQ=255)
cg...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt > 1:748447/1‑101 (MQ=255)
cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 1:3769696/96‑1 (MQ=255)
ccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc < 1:1940762/97‑1 (MQ=255)
ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt > 1:3563025/1‑101 (MQ=255)
cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc > 1:2088875/1‑101 (MQ=255)
cccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg < 2:4745654/101‑1 (MQ=255)
ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg > 1:3316566/1‑101 (MQ=255)
cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATTCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg > 1:4352779/1‑101 (MQ=255)
cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg > 2:4457204/1‑101 (MQ=255)
cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg < 2:2002612/101‑1 (MQ=255)
|
ATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGG..G....G....G.....CG...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGG > NC_014034/1639927‑1640112
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|