New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 390805 =48 (0.260)36 (0.200) 23/150 12.8 0.39 intergenic (‑121/+168) mipZ/rpmE chromosome partitioning protein MipZ/50S ribosomal protein L31
?NC_014034 1732895 = 65 (0.270)intergenic (‑319/‑84) RCAP_rcc01601/tgt FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
Rejected: Position hash score below cutoff.

CCCTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAGGGGGGCGGAGCC  >  NC_014034/390705‑390896
                                                                                                     |                                                                                            
cccTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGgtgt                                                                                              <  1:796078/101‑1 (MQ=255)
 ccTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGGGtt                                                                                             >  1:2348901/1‑101 (MQ=255)
  cTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGttt                                                                                            >  2:2311572/1‑101 (MQ=255)
  cTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGttt                                                                                            <  1:2479304/101‑1 (MQ=255)
   tCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTc                                                                                           <  2:2079710/101‑1 (MQ=255)
   tCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTc                                                                                           <  1:2198891/101‑1 (MQ=255)
   tCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTc                                                                                           <  1:4947811/101‑1 (MQ=255)
   tCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTc                                                                                           <  1:4351900/101‑1 (MQ=255)
   ccAGGCGGGCCGGGGGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTc                                                                                           <  1:3328336/100‑1 (MQ=255)
    cAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCg                                                                                          <  1:4568435/101‑1 (MQ=255)
     aGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGc                                                                                         >  2:2557494/1‑101 (MQ=255)
     aGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGc                                                                                         <  1:1328589/101‑1 (MQ=255)
      gACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGcc                                                                                        <  1:4784642/101‑1 (MQ=255)
        cGGCCCGCTCGTTTATAGGACGCTGCTGCTACCGAAGGAAGCGCGGCGGGGCAA.GGGGGGAGGCGCAAAGGTTTTGAACGGTCGCGGGGGTGTTTCGCCtg                                                                                      <  1:2112927/101‑2 (MQ=255)
         ggCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCg                                                                                     <  1:5028474/101‑1 (MQ=255)
          gCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCgg                                                                                    >  1:4959601/1‑101 (MQ=255)
          gCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCgg                                                                                    >  2:1685540/1‑101 (MQ=255)
          gCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCgg                                                                                    >  1:1284810/1‑101 (MQ=255)
           gccGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCggg                                                                                   <  2:915687/100‑1 (MQ=255)
           cccGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCggg                                                                                   <  2:3089796/101‑1 (MQ=255)
            ccGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGc                                                                                  <  2:4632045/101‑1 (MQ=255)
            ccGCGCGTTTATAGGACGCTCCGGCTACCGAAGAAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGc                                                                                  <  1:4303177/101‑1 (MQ=255)
             cgcgcgTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.a                                                                                <  2:4959271/101‑1 (MQ=255)
             cgcgcgTTTAGAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.a                                                                                <  2:3930915/101‑1 (MQ=255)
              gcgcgTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.aa                                                                               <  2:4084665/101‑1 (MQ=255)
                gcgTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGc                                                                             <  2:1030821/101‑1 (MQ=255)
                gcgTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGc                                                                             <  1:3842170/101‑1 (MQ=255)
                 cgTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAggc                                                                            >  2:5011711/1‑99 (MQ=255)
                  gTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGccc                                                                           <  2:3416208/101‑1 (MQ=255)
                  gTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGccc                                                                           <  1:59000/101‑1 (MQ=255)
                  gTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGAGGGGGTGTTTCGCCTCCGGA.AAGacc                                                                           >  1:1832241/1‑101 (MQ=255)
                   tttATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCg                                                                          <  1:3196073/101‑1 (MQ=255)
                   tttATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCg                                                                          <  1:29351/101‑1 (MQ=255)
                   tttATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCg                                                                          <  2:289530/101‑1 (MQ=255)
                     tataGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAg                                                                        <  1:425948/101‑1 (MQ=255)
                      ataGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.TGGGGGAGGTGCAAAGAGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAgg                                                                       <  1:5012041/101‑1 (MQ=255)
                        aGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCg                                                                     <  2:7077/101‑1 (MQ=255)
                        aGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCg                                                                     <  2:2297152/101‑1 (MQ=255)
                         ggACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGa                                                                    <  1:4733056/101‑1 (MQ=255)
                          gACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGAc                                                                   >  1:2152849/1‑101 (MQ=255)
                             gccccGGCTCCCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCcg                                                                <  2:2743577/98‑1 (MQ=255)
                             gCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCcg                                                                <  2:2340921/101‑1 (MQ=255)
                              cccgggCTACCGAAGGAAGCGCGCGGGTGCAG.GCGGGGAGGCGCAAAGGGTTTAAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCcgc                                                               <  1:4297872/97‑1 (MQ=38)
                                ccGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGG.AAGCCCCGGGCGGccccccg                                                             >  1:1927880/1‑97 (MQ=255)
                                   gCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCcggcggct                                                          >  1:2725720/1‑95 (MQ=255)
                                    cTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGGGGGGGTGTTTCGCCTGGGGC.AAGCCCGAGGCGACCCGCgggggg                                                         <  2:2348737/101‑1 (MQ=255)
                                     tACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGc                                                        >  1:1345858/1‑101 (MQ=255)
                                      aCCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCt                                                       <  1:2900395/101‑1 (MQ=255)
                                       ccGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCtt                                                      <  1:853661/101‑1 (MQ=255)
                                        cGAAGGAAGCGCGCCGGTGCAG.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCCCGGGC.AACCCCGAGGCGACCCGCGGGGGGCTTc                                                     <  1:1569462/101‑1 (MQ=255)
                                        cGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTc                                                     <  2:1345737/101‑1 (MQ=255)
                                        cGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTc                                                     <  2:1833523/101‑1 (MQ=255)
                                        cGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTc                                                     <  2:3644326/101‑1 (MQ=255)
                                              ggagcgcccGGTGGAATGGGGGGACGCTTATGGGGTGTGAAGGATCGGGTTGCTGTTCCGCTTTGGGC.AAGCCCGGGGCGACCCGCGGGGGGCTTCGcccc                                                <  2:74875/94‑1 (MQ=2)
                                               agggcgcCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGACCGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:3913130/98‑1 (MQ=255)
                                               agCGGGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGCACGCGCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  2:5018821/101‑1 (MQ=37)
                                               agCGCGCGGGTGCAG.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGGGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:2695896/101‑1 (MQ=255)
                                               agCGCGCGGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:1187846/101‑1 (MQ=255)
                                               agCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:2759669/101‑1 (MQ=255)
                                               agCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  2:2323883/101‑1 (MQ=255)
                                               agCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:3856354/101‑1 (MQ=255)
                                               agCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  2:4600574/101‑1 (MQ=255)
                                               agCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCCCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGcccccc                                              <  1:1685669/101‑1 (MQ=255)
                                                 cgcgcCGGTGCAG.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGc                                            <  2:2381367/101‑1 (MQ=255)
                                                   ggcCGGGGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCAc                                          <  2:1881227/100‑1 (MQ=255)
                                                   cgcGGGTGCAG.GGGGGGGGGCGCAAACGGTTTGAACGGTCGCGGGGGTTTTTCGCCTGGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCAc                                          <  1:4240287/101‑1 (MQ=25)
                                                    gcgggTGGAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCAcc                                         <  1:1640572/98‑1 (MQ=255)
                                                     ccGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGCCCCGCGGGGGGCTTCGCCCCCCGCAccc                                        <  2:383922/101‑1 (MQ=255)
                                                       ggTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCAccccc                                      <  1:1211458/101‑1 (MQ=255)
                                                             agggggggAGGGGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCCCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGc                                 <  1:2311736/99‑1 (MQ=255)
                                                              gggggggAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCg                                <  1:3987487/100‑1 (MQ=255)
                                                               ggggggAGGCGCAAAGGGTTTGACCGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGt                               <  2:392060/101‑1 (MQ=255)
                                                                 ggggAGGCGCAAAGGGTTTGAAGGGTCGCGGGGGTGTTTCGCCTGGGCC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTAt                             <  1:333721/101‑1 (MQ=255)
                                                                  gggAGGCGCAAAGGGTTTGAGCGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTAtt                            <  1:2557675/101‑1 (MQ=255)
                                                                  gggAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTAtt                            <  1:582256/101‑1 (MQ=255)
                                                                   gcaGGCGCAAAGGGTTTGAAGGGTCGGGGGGGTGTTTCGCCTCGGGC.AACCCCGAGGGGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTAttt                           <  2:2725519/99‑1 (MQ=25)
                                                                    gAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTAtttt                          <  2:4523733/101‑1 (MQ=255)
                                                                          cAAAGGGTGTGAACGGTGGCGGGGGTGTTCCGCCTCGGGC.AGGCCGGAGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAg                    <  1:2178339/101‑1 (MQ=18)
                                                                             aGGGTTTGAACGGTCGCGGGGGTGTTCCGCCTGGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGaa                 <  2:2355014/101‑1 (MQ=255)
                                                                             aGGGTTTGAACGGTCGAGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGaa                 <  1:245150/101‑1 (MQ=255)
                                                                              gggTTTGACCGGTCGCGGGGGTGTTTCCCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGaaa                <  1:215619/101‑1 (MQ=255)
                                                                                   gtcggtggcgctGGGGTGTTTCGCCTCGGGCTTTGCCCGAGGCGACCCGCCGGGGG.GGCCCCCCCCCCCCCCCCCGGGGATTTTTGGCCAGGGGAAAgggg           >  1:4760003/9‑101 (MQ=2)
                                                                                    gagggggcgggggggTGTTCCCCCGCGGGA.ACGCCCGGGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAggggg          <  2:3491736/91‑1 (MQ=17)
                                                                                      agcgcggcgGGGGTGTTTCGCCTGGGAC.AAGCCGGCGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAGGGGGGc        <  2:1395632/95‑1 (MQ=18)
                                                                                           cgggggggTGGTTCCCCGCGGGC.AACCCCGGGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAGGGGGGCGGAGc   <  2:1511502/98‑1 (MQ=21)
                                                                                            gggggggTGTTCCGCCTCGGGC.AAGCCCGAGGCGCCCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAGGGGGGCGGAGcc  <  2:3691727/99‑1 (MQ=255)
                                                                                                     |                                                                                            
CCCTCAGACGGCCCGCGCGTTTATAGGACGCTCCGGCTACCGAAGGAAGCGCGCCGGTGCAA.GGGGGGAGGCGCAAAGGGTTTGAACGGTCGCGGGGGTGTTTCGCCTCGGGC.AAGCCCGAGGCGACCCGCGGGGGGCTTCGCCCCCCGCACCCCCCCAGCGTATTTTGCCAAGGAAAAGGGGGGCGGAGCC  >  NC_014034/390705‑390896

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG