BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3199644 =	246 (1.130)	3 (0.010)	2/178	28.2	0.01	coding (262/468 nt)	RCAP_rcc03008	hypothetical protein
*	?	NC_014034	3632094 =	246 (1.000)	3 (0.010)	2/178	28.2	0.01	intergenic (+40/‑10)	RCAP_rcc03429/livM3	hypothetical protein/branched‑chain amino acid ABC transporter permease LivM
Rejected: Position hash score below cutoff.

Only 100 of 273 total aligned reads displayed.


TCTCGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCAGAGG  >  NC_014034/3199545‑3199744


tctcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCTGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCCCGCCGACCGAGGcc                                                                                                     <  2:5026544/101‑1 (MQ=255)


tctcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGcc                                                                                                     >  2:3084044/1‑101 (MQ=255)


tctcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGCGATCGTCAGCTCAAGCCCCGCGCCGCCCGAGGcc                                                                                                     >  1:84305/1‑101 (MQ=255)


 ctcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGccc                                                                                                    >  1:4831327/1‑101 (MQ=255)


 ctcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGccc                                                                                                    >  1:3500751/1‑101 (MQ=255)


  tcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGcccc                                                                                                   <  1:1590360/101‑1 (MQ=255)


  tcGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGcccc                                                                                                   <  2:2972751/101‑1 (MQ=255)


   cGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCg                                                                                                  >  2:1277243/1‑101 (MQ=255)


    gACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCgg                                                                                                 >  2:3631844/1‑101 (MQ=255)


       cGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGa                                                                                              >  1:1786764/1‑101 (MQ=255)


        gAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGAt                                                                                             >  1:566476/1‑101 (MQ=255)


        gAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGAt                                                                                             >  1:2685881/1‑101 (MQ=255)


        gAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGAt                                                                                             <  2:4596648/101‑1 (MQ=255)


        gAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAACTCACGCCCCGCGCCGACCGAGGCCCCGGTGAt                                                                                             >  1:4341485/1‑101 (MQ=255)


          aCTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGc                                                                                           <  2:121322/101‑1 (MQ=255)


          aCTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGc                                                                                           >  2:4425717/1‑101 (MQ=255)


            tGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCa                                                                                         >  1:3118996/1‑101 (MQ=255)


            tGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCa                                                                                         >  2:1585468/1‑101 (MQ=255)


             gTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCAt                                                                                        >  1:1029835/1‑101 (MQ=255)


              tCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATc                                                                                       >  2:2170922/1‑101 (MQ=255)


               cGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCg                                                                                      <  1:4967600/101‑1 (MQ=255)


               cGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCg                                                                                      >  1:2986218/1‑101 (MQ=255)


                  cATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGAcc                                                                                   <  1:3654332/101‑1 (MQ=255)


                   aTGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCt                                                                                  <  2:4067472/101‑1 (MQ=255)


                     gCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTgc                                                                                >  1:965929/1‑101 (MQ=255)


                      cAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTgcg                                                                               <  1:1989973/101‑1 (MQ=255)


                      cAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTgcg                                                                               >  1:1681405/1‑101 (MQ=255)


                       aGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTgcgc                                                                              >  2:1451739/1‑101 (MQ=255)


                       aGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTgcgc                                                                              >  2:1364820/1‑101 (MQ=255)


                           cATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTa                                                                          <  2:1480311/101‑1 (MQ=255)


                            aTAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTAt                                                                         >  2:1844677/1‑101 (MQ=255)


                            aTAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTAt                                                                         >  2:1735427/1‑101 (MQ=255)


                             tAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTAtt                                                                        >  2:1746745/1‑101 (MQ=255)


                             tAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTAtt                                                                        <  1:1290791/101‑1 (MQ=255)


                              aGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTg                                                                       >  2:176333/1‑101 (MQ=255)


                              aGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTg                                                                       <  1:4081772/101‑1 (MQ=255)


                               gCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTgc                                                                      >  1:5032992/1‑101 (MQ=255)


                                  cTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTgccgc                                                                   <  2:1189764/101‑1 (MQ=255)


                                   tGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTgccgcc                                                                  >  2:4750753/1‑101 (MQ=255)


                                   tGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTgccgcc                                                                  >  2:724758/1‑101 (MQ=255)


                                    gATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGccgccg                                                                 <  1:1249924/101‑1 (MQ=255)


                                    gATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGACCCGGTGATGCCATCGACCTGCGCGGTATTCccgccg                                                                 >  2:2813402/1‑101 (MQ=255)


                                      tCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGt                                                               >  2:3970757/1‑101 (MQ=255)


                                      tCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGt                                                               <  2:51263/101‑1 (MQ=255)


                                          aCAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTcgcc                                                           <  2:3330008/101‑1 (MQ=255)


                                             gCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCa                                                        >  2:4511737/1‑101 (MQ=255)


                                              cGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCAt                                                       >  1:332433/1‑101 (MQ=255)


                                               gTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATa                                                      >  1:139398/1‑101 (MQ=255)


                                               gTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATa                                                      <  1:661607/101‑1 (MQ=255)


                                               gTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATa                                                      <  2:4831000/101‑1 (MQ=255)


                                                tATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATAc                                                     >  1:3618110/1‑101 (MQ=255)


                                                 aTCGGCCAGATCGTGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATAcc                                                    <  1:1700919/101‑1 (MQ=255)


                                                 aTCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATAcc                                                    >  2:2682549/1‑101 (MQ=255)


                                                 aTCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATAcc                                                    >  2:2697482/1‑101 (MQ=255)


                                                 aTCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATAcc                                                    <  2:4358650/101‑1 (MQ=255)


                                                  tCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCa                                                   <  1:1184167/101‑1 (MQ=255)


                                                   cGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCac                                                  >  2:951845/1‑100 (MQ=255)


                                                   cGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAg                                                  >  1:2355439/1‑101 (MQ=255)


                                                    ggCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAgc                                                 <  2:566397/101‑1 (MQ=255)


                                                    ggCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAgc                                                 <  1:2591932/101‑1 (MQ=255)


                                                     gCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAgcc                                                <  2:4241805/101‑1 (MQ=255)


                                                            cGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAgg                                         >  2:4290738/1‑101 (MQ=255)


                                                             gAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAggg                                        >  2:3745892/1‑100 (MQ=255)


                                                             gAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGt                                        >  1:219741/1‑101 (MQ=255)


                                                             gAGGGTGATCGTCAGCTCACGCCCCGCGCCCACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGt                                        <  1:443448/101‑1 (MQ=255)


                                                              aGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTg                                       <  1:2214134/101‑1 (MQ=255)


                                                              aGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACAAGCCGCCGAGGTg                                       >  1:2399125/1‑101 (MQ=255)


                                                                ggTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGc                                     >  1:1806011/1‑101 (MQ=255)


                                                                ggTGACCGTCAGCTCCCGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGc                                     <  2:2269593/101‑1 (MQ=255)


                                                                   taTCTTCCGCTCCCGCCCCGCCCCGCCCGAGCTCCCGGTGATGCCATCGACCTGCGAGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGt                                  <  2:3192131/100‑1 (MQ=255)


                                                                      cGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAat                               <  2:2355275/101‑1 (MQ=255)


                                                                        tCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAatat                             <  2:1981696/101‑1 (MQ=255)


                                                                         cAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATAtt                            >  2:2928864/1‑101 (MQ=255)


                                                                          aGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATAttt                           <  2:4947137/101‑1 (MQ=255)


                                                                          aGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATAttt                           <  2:750564/101‑1 (MQ=255)


                                                                           gCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTc                          <  1:3929850/101‑1 (MQ=255)


                                                                              cACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGcc                       >  1:1151484/1‑101 (MQ=255)


                                                                               aCGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCt                      >  2:3210091/1‑101 (MQ=255)


                                                                                cGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCCCCtt                     >  2:687514/1‑101 (MQ=255)


                                                                                 gCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTg                    <  1:486692/101‑1 (MQ=255)


                                                                                   cccGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTgcc                  <  1:2845980/101‑1 (MQ=255)


                                                                                       cgcCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGccgccc              <  1:2533478/101‑1 (MQ=255)


                                                                                          cgaccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCcgcccgcc           <  1:4567705/101‑1 (MQ=255)


                                                                                          cgaccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCcgcccgcc           <  2:3911232/101‑1 (MQ=255)


                                                                                          cgaccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCcgcccgcc           <  1:8945/101‑1 (MQ=255)


                                                                                           gaccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCa          >  1:104718/1‑101 (MQ=255)


                                                                                           gaccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCa          <  1:4291055/101‑1 (MQ=255)


                                                                                            accgaGGCCCCGGTGATGCCATCGCCCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCAt         <  1:3971049/101‑1 (MQ=255)


                                                                                             ccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATc        <  2:3386336/101‑1 (MQ=255)


                                                                                             ccgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATc        <  1:3746170/101‑1 (MQ=255)


                                                                                              cgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATcc       <  1:4529232/101‑1 (MQ=255)


                                                                                              cgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATcc       <  1:1746875/101‑1 (MQ=255)


                                                                                              cgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATcc       <  2:1426770/101‑1 (MQ=255)


                                                                                              cgaGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCAGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATcc       >  2:2575635/1‑101 (MQ=255)


                                                                                                aGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCag     >  1:4152967/1‑101 (MQ=255)


                                                                                                 ggCCCCGGTGATGCCATCGCCCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCaga    <  1:2944266/101‑1 (MQ=255)


                                                                                                 ggCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCaga    <  1:405526/101‑1 (MQ=255)


                                                                                                  gCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCagag   <  1:3272607/101‑1 (MQ=255)


                                                                                                  gCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCagag   <  1:4717268/101‑1 (MQ=255)


                                                                                                   ccccGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCAGAgg  >  2:3438653/1‑101 (MQ=255)


TCTCGACCGAACTGTCGACATGCAGGACATAGCCCTGATCGAACAGCGTATCGGCCAGATCGAGGGTGATCGTCAGCTCACGCCCCGCGCCGACCGAGGCCCCGGTGATGCCATCGACCTGCGCGGTATTGCCGCCGGTCGCCGCATACCAGCCGCCGAGGTGGCTGTAATATTTCGCCTTGCCGCCCGCCATCCAGAGG  >  NC_014034/3199545‑3199744

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG