BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	235596 =	153 (0.620)	24 (0.100)	5/200	26.8	0.18	intergenic (+25/+186)	RCAP_rcc00200/RCAP_rcc00201	MarR family transcriptional regulator/adenine‑specific DNA‑methyltransferase
*	?	NC_014034	900797 =	65 (0.270)	24 (0.100)	5/200	26.8	0.18	intergenic (‑126/‑161)	ldh/ftsW	L‑lactate dehydrogenase/cell division protein FtsW
Rejected: Position hash score below cutoff.

Only 100 of 171 total aligned reads displayed.


ACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTCACA  >  NC_014034/235498‑235696


aCATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCATGGTGCGCGAATTGCGGCGGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc                                                                                                     <  2:1997117/101‑1 (MQ=255)


   tCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..cccccc                                                                                                  <  1:4401200/101‑3 (MQ=255)


   tCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..cccccc                                                                                                  <  2:4318655/101‑3 (MQ=255)


     ggCGCCCACAAGGTCCGCGCTGCCTTTCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGGGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccccccgc                                                                                                <  2:626581/101‑5 (MQ=255)


       cgcGGACAACGTCCGCGCCACGTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccccccgcac                                                                                              <  2:3855455/101‑7 (MQ=255)


           gACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCAccccc                                                                                            <  2:3318089/101‑1 (MQ=255)


            aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCAcccccc                                                                                           <  1:4195839/101‑1 (MQ=255)


            aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCAcccccc                                                                                           <  2:4063137/101‑1 (MQ=255)


             cAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCg                                                                                          <  1:3627504/101‑1 (MQ=255)


             cAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCg                                                                                          <  2:221867/101‑1 (MQ=255)


                ggTCCGCGCCGCCTTGCCCGTGCTGCGGGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGc                                                                                       <  1:1712304/101‑1 (MQ=255)


                ggTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGc                                                                                       <  1:1241484/101‑1 (MQ=255)


                ggTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGc                                                                                       <  1:2508636/101‑1 (MQ=255)


                  tCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGt                                                                                     <  1:4650455/101‑1 (MQ=255)


                  tCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGt                                                                                     <  2:4533428/101‑1 (MQ=255)


                   ccGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTa                                                                                    <  1:3959792/101‑1 (MQ=255)


                    cgcgCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTAt                                                                                   <  2:4634493/101‑1 (MQ=255)


                    cgcgCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTAt                                                                                   <  1:4846778/101‑1 (MQ=255)


                     ccgccgcCTTTCCCGGTCTGCGCGGATTGCGGCTTCCGCTCGAGGAAAGCTTAAGCCGCCGAACGGGGGTCTTTCCGCCCCCCGCACCCCCCGGGCGTAtt                                                                                  <  2:2131473/100‑1 (MQ=19)


                      cgccgcCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTAttt                                                                                 <  1:1019479/101‑1 (MQ=255)


                      cgccgcCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTAttt                                                                                 <  2:4944016/101‑1 (MQ=255)


                      cgccgcCTTGCCCGTGCGGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTAttt                                                                                 <  2:2506506/101‑1 (MQ=38)


                       gccgccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTg                                                                                <  1:2959415/101‑1 (MQ=255)


                         cgccTTGCCCGTGCTGCGCGAGTTGCGGGTGCGGGTCGAGGAAAGCGGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCa                                                                              <  2:2642155/101‑1 (MQ=37)


                         cgccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCa                                                                              <  1:526303/101‑1 (MQ=255)


                             ttGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCaa                                                                          <  1:2134307/101‑1 (MQ=255)


                              tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAg                                                                         <  1:1636947/101‑1 (MQ=255)


                              tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAg                                                                         <  1:4770240/101‑1 (MQ=255)


                              tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAg                                                                         <  2:68092/101‑1 (MQ=255)


                               gCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGa                                                                        <  1:4425674/101‑1 (MQ=255)


                               gCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGa                                                                        <  2:1167860/101‑1 (MQ=255)


                               gCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGa                                                                        <  1:2599195/101‑1 (MQ=255)


                                cccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaa                                                                       <  2:2213573/101‑1 (MQ=255)


                                  cGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaaaa                                                                     <  2:1653434/101‑1 (MQ=255)


                                    tgctgcGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAg                                                                   <  1:315600/101‑1 (MQ=255)


                                       tgcGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.a                                                               <  1:2483863/101‑1 (MQ=255)


                                         cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AAc                                                             <  1:879549/101‑1 (MQ=255)


                                         cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AAc                                                             <  2:3187925/101‑1 (MQ=255)


                                         cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AAc                                                             <  1:2176038/101‑1 (MQ=255)


                                              aTTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGtt                                                        <  2:1933480/101‑1 (MQ=255)


                                              aTTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGtt                                                        <  2:2027125/101‑1 (MQ=255)


                                               ttGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGttt                                                       <  1:423462/101‑1 (MQ=255)


                                               ttGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGttt                                                       <  1:1894099/101‑1 (MQ=255)


                                                tgcggctgcggcTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTttc                                                      <  2:4108897/101‑1 (MQ=255)


                                                tgcggctgcggcTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTttc                                                      <  2:1569218/101‑1 (MQ=255)


                                                tgcggctgcggcTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTttc                                                      <  1:236605/101‑1 (MQ=255)


                                                tgcggctgcggcTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTttc                                                      <  1:2908222/101‑1 (MQ=255)


                                                  cggctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTttctt                                                    <  2:1734911/101‑1 (MQ=255)


                                                    gctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTtcttct                                                  <  2:2407607/101‑1 (MQ=255)


                                                    gctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTtcttct                                                  <  1:4944792/101‑1 (MQ=255)


                                                     ctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTcttctt                                                 <  2:449903/101‑1 (MQ=255)


                                                     ctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTcttctt                                                 <  1:3458369/101‑1 (MQ=255)


                                                     ctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTcttctt                                                 <  2:1615220/101‑1 (MQ=255)


                                                        cggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTggg                                              <  1:4417687/101‑1 (MQ=255)


                                                         ggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGa                                             <  1:606386/101‑1 (MQ=255)


                                                         ggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGa                                             <  1:2044905/101‑1 (MQ=255)


                                                         ggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGa                                             <  1:3814509/101‑1 (MQ=255)


                                                         ggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTATTGGGa                                             <  1:3167829/101‑1 (MQ=38)


                                                           ctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGaaa                                           <  2:807202/101‑1 (MQ=255)


                                                              gAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAAt                                        <  2:4902905/101‑1 (MQ=255)


                                                               aGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGGCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATa                                       <  1:1471364/101‑1 (MQ=255)


                                                               aGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATa                                       <  2:1101987/101‑1 (MQ=255)


                                                                  aaaGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGc                                    <  2:1627068/101‑1 (MQ=255)


                                                                     gCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGcccc                                 <  2:1834215/101‑1 (MQ=255)


                                                                      cggAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCt                                <  1:669784/99‑1 (MQ=38)


                                                                       tGAAGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCtt                               <  1:3419238/101‑1 (MQ=255)


                                                                         aaGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCtttt                             <  1:3283857/101‑1 (MQ=255)


                                                                         aaGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCtttt                             <  1:3706521/101‑1 (MQ=255)


                                                                          aGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCttttt                            <  2:3729606/101‑1 (MQ=255)


                                                                          aGCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCttttt                            <  2:3148593/101‑1 (MQ=255)


                                                                           gCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTc                           <  2:1231432/101‑1 (MQ=255)


                                                                           gCCGCGGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTc                           <  2:5018668/101‑1 (MQ=255)


                                                                              gcgGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTg                        <  2:1032197/101‑1 (MQ=255)


                                                                               cgGAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTgg                       <  2:58859/101‑1 (MQ=255)


                                                                                ggAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGc                      <  2:183525/101‑1 (MQ=255)


                                                                                 gAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCt                     <  2:3553176/101‑1 (MQ=255)


                                                                                 gAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCt                     <  2:3364912/101‑1 (MQ=255)


                                                                                 gAACGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCt                     <  1:3796037/101‑1 (MQ=255)


                                                                                   aCGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCa                   <  1:3319419/101‑1 (MQ=255)


                                                                                    cGGGGGGCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCaa                  <  2:1973878/101‑1 (MQ=255)


                                                                                      gggggCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAAt                <  1:2894759/101‑1 (MQ=255)


                                                                                       ggggCTTTCCGCCCCCCGCACCCCCCGGGCGGATTTGCACCAAGAAAAAACG.AACGGGGTTCTTCTTGGGGAAAATAAGCCCCTTTTTCTTGGCTCAAATa               >  1:2696453/1‑101 (MQ=37)


                                                                                        gggCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTTCCCCAAAAAAAAGCG.AACGGGTTTCTTCTTGGGGAAAAAACCCCCCTTTTTTTTGGCTCacaaaa              >  2:1901973/1‑96 (MQ=21)


                                                                                        gggCTTTCCGCCCCCCGCACCCCCCGGGCGGATTTTCACCCAAAAAAAACGAAAGGGGTTTTTTTTTGGGAAAAA.ACGCCCCTTTTTTTTTGCTCcaaaaa              >  2:3469329/1‑98 (MQ=12)


                                                                                         ggCTTTCCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACg             <  1:1504851/101‑1 (MQ=255)


                                                                                           ctttccgccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCa           >  2:3207251/10‑101 (MQ=255)


                                                                                            tttccgccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAg          >  2:4682582/9‑101 (MQ=255)


                                                                                             ttccgccccccGCACCCCCCGGGCGGATTTTCCCCAAAAAAAAACG.AAAGGGGTTCTTTTTTGGGAAAAAACACCCCCTTTTCTTTGGTCAAATACGCaac         >  2:2547932/8‑99 (MQ=12)


                                                                                               ccgccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCt       <  1:1569754/96‑1 (MQ=255)


                                                                                               ccgccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGGTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCt       >  2:2810022/6‑101 (MQ=255)


                                                                                                cgccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCtt      <  1:1060797/97‑1 (MQ=255)


                                                                                                 gccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  2:4449021/98‑1 (MQ=255)


                                                                                                 gccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  2:428939/98‑1 (MQ=255)


                                                                                                 gccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  2:2867197/98‑1 (MQ=255)


                                                                                                 gccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  1:4453575/98‑1 (MQ=255)


                                                                                                  ccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  2:2590909/99‑1 (MQ=255)


                                                                                                  ccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  2:1889720/99‑1 (MQ=255)


                                                                                                  ccccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  1:925262/99‑1 (MQ=255)


                                                                                                   cccccGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcac   <  2:1690681/100‑1 (MQ=255)


                                                                                                    ccccGCGCCCCCCGGGCCTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcaca  <  2:3644432/101‑1 (MQ=255)


ACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCG.AACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTCACA  >  NC_014034/235498‑235696

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG