BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253890	34 (0.150)	50 (0.230)	4/178	26.1	0.39	intergenic (+48/+43)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2590190 =	121 (0.490)	50 (0.230)	4/178	26.1	0.39	intergenic (‑89/‑167)	glnE/RCAP_rcc02415	glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 144 total aligned reads displayed.


TGCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.C.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTG  >  NC_014034/2590090‑2590289


 gCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCggg                                                                                                              >  1:3677817/1‑101 (MQ=255)


 gCAAGGCTCAGGGCGCCGGCCTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCggg                                                                                                              <  1:3564688/101‑1 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggg                                                                                                             >  2:768828/1‑101 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggg                                                                                                             <  1:266667/101‑1 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggg                                                                                                             <  2:380935/101‑1 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggg                                                                                                             >  2:3197180/1‑101 (MQ=255)


    gggccctgggCCCCAGACTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggggg                                                                                                           <  1:1194282/93‑1 (MQ=255)


    aGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCgggggg                                                                                                           <  2:4200464/101‑1 (MQ=255)


     ggCTCAGGGCCCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGc                                                                                                          <  1:2880564/101‑1 (MQ=255)


      gCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.a                                                                                                        >  1:117723/1‑101 (MQ=255)


      gCTCAGGGCCCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.a                                                                                                        <  1:4614222/101‑1 (MQ=255)


       cTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag                                                                                                       >  2:19884/1‑101 (MQ=255)


       cTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag                                                                                                       >  2:1003532/1‑101 (MQ=255)


        tCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag..c                                                                                                    >  2:2241289/1‑101 (MQ=255)


        tCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag..c                                                                                                    >  2:1608232/1‑101 (MQ=255)


        ccATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag..c                                                                                                    <  2:74756/100‑1 (MQ=255)


         cagggCGCAAGACTACCCCCCGAAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.Ag..cg                                                                                                   <  2:2341758/98‑1 (MQ=255)


         cATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGCGCGGGGGGC.Ag..cg                                                                                                   >  2:4686842/1‑101 (MQ=255)


           tGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.c                                                                                               >  2:2732490/1‑101 (MQ=255)


            ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cc                                                                                              >  1:1629274/1‑101 (MQ=255)


            ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTAATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cc                                                                                              <  1:3304977/101‑1 (MQ=255)


              cgcCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cccc                                                                                            >  2:925146/1‑101 (MQ=255)


              ccccAGCCTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cccc                                                                                            <  1:3534181/99‑1 (MQ=255)


              ccccAGACTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cccc                                                                                            <  1:1026981/99‑1 (MQ=255)


               cccAGCCTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.ccccc                                                                                           <  1:1845602/100‑2 (MQ=255)


                   gACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.c.cccccgccg                                                                                       >  1:973285/1‑96 (MQ=255)


                       aGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTc                                                                                >  2:1529267/1‑101 (MQ=255)


                        gccgccGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCg                                                                               >  2:3730493/1‑101 (MQ=255)


                            ccgcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTc                                                                           >  1:4828540/1‑101 (MQ=255)


                            ccgcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTc                                                                           >  1:3207939/1‑101 (MQ=255)


                              gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCgg                                                                         >  1:247255/1‑101 (MQ=255)


                              gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCgg                                                                         >  1:1288888/1‑101 (MQ=255)


                              gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGAC.CCCC..GCC..GGGTCGCCTCgg                                                                         >  2:2503474/1‑101 (MQ=255)


                                 aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGgcgc                                                                      >  2:1368642/1‑101 (MQ=255)


                                  gCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCa                                                                     >  1:2407299/1‑101 (MQ=255)


                                       gggTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCg                                                                >  2:3254210/1‑101 (MQ=255)


                                       gggTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGGGCGGGGGGC.AG..CG.CACCCC..GCC..GGGTCGCCTCGGAGCAAGCCg                                                                >  1:3128673/1‑101 (MQ=255)


                                         gTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAg                                                              >  1:4624890/1‑101 (MQ=255)


                                         gTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGAC.AG..CGCC.CCCC..GCC..GGGGCGCCTCGGCGCAAGCCGAg                                                              >  2:4824380/1‑101 (MQ=255)


                                          tCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAgg                                                             >  1:3949552/1‑101 (MQ=255)


                                           cAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCCAGCCGAGGc                                                            >  1:2707510/1‑101 (MQ=255)


                                           cAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGATGc                                                            >  1:90576/1‑101 (MQ=255)


                                            aaGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCg                                                           >  2:2960840/1‑101 (MQ=255)


                                             aGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGa                                                          >  1:3100103/1‑101 (MQ=255)


                                                cgcgcAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAAt                                                       >  1:2898532/1‑101 (MQ=255)


                                                    cAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGACAtctcc                                                   >  2:1370321/1‑100 (MQ=255)


                                                     aaaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc.tc                                                 >  2:2232771/1‑101 (MQ=255)


                                                     aaaTGCCCAGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc.tc                                                 >  2:4531907/1‑101 (MQ=255)


                                                      aaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGCAATCTC.Tcc                                                >  2:2411250/1‑101 (MQ=255)


                                                      aaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc.ttc                                                >  2:4773428/1‑99 (MQ=255)


                                                       aTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAGTCTC.Tccc                                               >  2:1910133/1‑101 (MQ=255)


                                                       aTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.Tccc                                               >  2:3488906/1‑101 (MQ=255)


                                                         gccccgccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCg                                             >  2:3109324/1‑101 (MQ=255)


                                                             cgccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGCAATCTC.TCCCCGAccc                                         >  1:165252/1‑101 (MQ=255)


                                                                cccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCtt                                      >  2:4387995/1‑101 (MQ=255)


                                                                    gTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCACGCNGANGCGACATNTN.NCCCNCCCNCCTTgcgg                                  >  1:1631393/1‑101 (MQ=25)


                                                                     tCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCAGAGGCGAAATCTC.TCCCCGACCCCTTgcggc                                 >  1:4892564/1‑101 (MQ=255)


                                                                      cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTgcggcg                                >  1:1961414/1‑101 (MQ=255)


                                                                       aTCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGgcgc                               >  1:3205894/1‑101 (MQ=255)


                                                                           tGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATg                           >  1:2183994/1‑101 (MQ=255)


                                                                           tGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATg                           >  2:4590897/1‑101 (MQ=255)


                                                                            ggCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..AGCC.CCCC..GCC..GGGCCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTtcggctctacgt                          >  2:742333/1‑94 (MQ=25)


                                                                                cgAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGCaaaa                      >  1:2338319/1‑101 (MQ=255)


                                                                                 gaaagacccGGGGGGGGGGGGGGGC.CGCCCC.C.CCCC..CCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTaaaa                      <  1:2509139/95‑1 (MQ=25)


                                                                                 gAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCACTGTaacaa                     >  1:3641595/1‑101 (MQ=37)


                                                                                 gAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCACAGTaaaaa                     >  2:901109/1‑101 (MQ=37)


                                                                                 gAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTaaaaa                     >  2:2029384/1‑101 (MQ=255)


                                                                                 gAATATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTaaaaa                     >  1:210544/1‑101 (MQ=255)


                                                                                 gAATATCCCGGGGGGTGCGGGGAGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTaaaaa                     >  1:2458141/1‑101 (MQ=255)


                                                                                  aaTATCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAAt                    >  1:5024806/1‑101 (MQ=255)


                                                                                    tatCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCt                  >  1:3650223/1‑101 (MQ=255)


                                                                                     cgcccGGGGGGGGGGGGGGGCGCG..CC.C.CCCC..CCCCGGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATc                   <  1:4770148/99‑1 (MQ=255)


                                                                                     atCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                 >  2:4068320/1‑101 (MQ=255)


                                                                                     atCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                 >  1:4470631/1‑101 (MQ=255)


                                                                                     atCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                 >  1:3889192/1‑101 (MQ=255)


                                                                                     atCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.CCCCCGACCCCTTGCGGCGCGATGTAAAAATCtt                 >  1:4341458/1‑101 (MQ=37)


                                                                                      tCCCGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt                >  1:2997522/1‑101 (MQ=255)


                                                                                        ggggggggGGGGGGGGGC.GG..CC.C.CCCCCGGCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc               <  1:4710205/99‑1 (MQ=37)


                                                                                         gggggggGGGGGGGGGC.CC..CC.C.CCCCG.GCC..GGGCCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             <  1:1529397/100‑1 (MQ=255)


                                                                                         cGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             >  2:4863733/1‑101 (MQ=255)


                                                                                         cGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             >  1:1113848/1‑101 (MQ=255)


                                                                                         cGGGGGGTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             >  2:3653902/1‑101 (MQ=255)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGGCTCGGGGCCAGCCGCGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  1:1433391/1‑101 (MQ=37)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGGGAAATCTC.TCCCCCACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  2:2525098/1‑101 (MQ=38)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  2:3946552/1‑101 (MQ=255)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  1:3768865/1‑101 (MQ=255)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  1:4997357/1‑101 (MQ=255)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCCCCGCGCCAACCGAGGCGGAAACTCTTCCCCACCCCCTTCCGCCGCAA.GTAAAAAACttttcac            >  2:1754095/1‑97 (MQ=12)


                                                                                          ggggggTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGGCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATATTTcaca            >  2:1476489/1‑101 (MQ=38)


                                                                                             gggggggggggcC.CG..CC.C.CCGC..CCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATccc        <  2:393886/95‑1 (MQ=37)


                                                                                               gTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATcccc       >  1:1593934/1‑101 (MQ=255)


                                                                                               gTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATcccc       >  2:318473/1‑101 (MQ=255)


                                                                                               gTGCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATcccc       >  1:4769500/1‑101 (MQ=255)


                                                                                                 gCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctc     >  1:1639060/1‑101 (MQ=255)


                                                                                                 gCGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCAAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctc     >  2:2579281/1‑101 (MQ=255)


                                                                                                  cGGGGGGC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGACATCTC.TCCCCGACCCCTTGCCGCGCCATGTAAAAATCTTTCAAATCCCctct    >  2:2792897/1‑101 (MQ=38)


                                                                                                  cGGGGGCC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct    <  2:1638928/101‑1 (MQ=255)


                                                                                                   ggggggC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTCAACATCTTTCACATCCCCTAtt   >  2:799484/1‑101 (MQ=38)


                                                                                                   ggggggC.AG..CGCC.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt   >  2:4237077/1‑101 (MQ=255)


                                                                                                   ggggggC.AG..CGCC.CCCC..GCC..GGGTCGCCCCGGCGCACGCCCCGGGGAGAACTC.TCCCCCCCCCCCCTCGGCGCCCAGTCAAAAACTTTTACATCCCCTCtt   >  2:1888199/1‑101 (MQ=255)


TGCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGC.AG..CG.C.CCCC..GCC..GGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTC.TCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTG  >  NC_014034/2590090‑2590289

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG