BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1395466	216 (1.300)	58 (0.350)	17/136	14.0	0.22	intergenic (+278/‑653)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	1396165 =	184 (0.750)	58 (0.350)	17/136	14.0	0.22	coding (47/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 284 total aligned reads displayed.


GGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA  >  NC_014034/1396065‑1396265


   gcATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGt                                                                                                    <  2:4414796/101‑1 (MQ=255)


   gcATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGt                                                                                                    <  1:1689852/101‑1 (MQ=255)


    cATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTc                                                                                                   >  2:605772/1‑101 (MQ=255)


       cTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCt                                                                                                >  2:4791846/1‑101 (MQ=255)


         gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcc                                                                                              <  1:3830874/101‑1 (MQ=255)


         gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcc                                                                                              >  2:2992327/1‑101 (MQ=255)


          aTGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCAAGCTGCGTCGCTccc                                                                                             <  1:1715770/101‑1 (MQ=255)


            gTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTccccc                                                                                           <  1:3399894/101‑1 (MQ=255)


            gTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTccccc                                                                                           >  1:1079077/1‑101 (MQ=255)


            gTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTccccc                                                                                           >  2:801945/1‑101 (MQ=255)


             tataTGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcccccc                                                                                          <  2:116247/101‑1 (MQ=255)


             tataTGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcccccc                                                                                          <  2:3664271/101‑1 (MQ=255)


             tataTGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcccccc                                                                                          <  2:3866397/101‑1 (MQ=255)


             tataTGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCCCTcccccc                                                                                          >  2:4148678/1‑101 (MQ=255)


             tataTGCACGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcccccc                                                                                          <  1:4266241/101‑1 (MQ=255)


              atatGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTccccccc                                                                                         >  1:3770631/1‑100 (MQ=255)


                atGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCcgcg                                                                                       >  2:4881231/1‑101 (MQ=255)


                atGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACCCTGCGCCGCTCCCCCcgcg                                                                                       >  1:1373032/1‑101 (MQ=255)


                   cccGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCgggg                                                                                    <  2:2479700/101‑1 (MQ=255)


                   cccGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGATGCGTCGCTCCCCCCCCgggg                                                                                    >  2:543067/1‑101 (MQ=255)


                     cGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCCCGGGGGc                                                                                  >  1:3133702/1‑101 (MQ=255)


                     cGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGGGTCGCACCCCCCCCGGGGGc                                                                                  >  1:651189/1‑101 (MQ=38)


                       gTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGt                                                                                <  1:3712601/101‑1 (MQ=255)


                        tgtctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTg                                                                               <  2:4218159/91‑1 (MQ=9)


                        tgtctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTg                                                                               <  2:10630/91‑1 (MQ=9)


                         ttctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  2:4080269/92‑1 (MQ=2)


                         gtctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  2:3446395/92‑1 (MQ=2)


                         gtctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                              >  1:1172676/10‑101 (MQ=2)


                         gagaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCTCCCCCCCCGGGGGCGGgg                                                                              >  1:4461839/1‑101 (MQ=255)


                         gagaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTgg                                                                              >  1:2216982/1‑101 (MQ=255)


                          agaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCCCGGGGGCGTggg                                                                             >  1:3178220/1‑100 (MQ=255)


                          agaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCCCGGGGGCGTGGa                                                                             >  1:3883656/1‑101 (MQ=255)


                           gaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            <  2:4857267/101‑1 (MQ=255)


                           gaCGGCTGACGCTCTCCCCGCGGGGGCGTGGATGGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            <  1:4363601/101‑1 (MQ=255)


                             cGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          >  2:5046488/1‑101 (MQ=255)


                              ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGGGGATCGa                                                                         >  2:4552622/1‑101 (MQ=255)


                                cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       >  1:2924918/1‑101 (MQ=255)


                                 tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCCCGGGGGCGTGGGTCGAAAc                                                                      >  1:962758/1‑101 (MQ=255)


                                 tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCCCGGGGGCGTGGGTCGAAAc                                                                      >  1:1018626/1‑101 (MQ=255)


                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGCGGGCGCGGAACGAAAcc                                                                     >  2:2469481/1‑101 (MQ=255)


                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                                                    <  2:232097/101‑1 (MQ=255)


                                       tCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCg                                                                <  1:581780/101‑1 (MQ=255)


                                         cccccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaa                                                              >  2:3217798/1‑101 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaaaa                                                            <  2:2431218/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaaaa                                                            <  2:3518471/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaaaa                                                            <  2:911137/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaaaa                                                            <  1:2345822/101‑1 (MQ=255)


                                            ccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGaaaaa                                                           <  1:3650592/101‑1 (MQ=255)


                                              gcgGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACg                                                         <  2:4976597/101‑1 (MQ=255)


                                                  gggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCa                                                     <  1:4423984/101‑1 (MQ=255)


                                                  gggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCa                                                     >  2:4308628/1‑101 (MQ=255)


                                                  gggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCa                                                     >  2:3021905/1‑101 (MQ=255)


                                                    gCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATg                                                   <  1:3292960/101‑1 (MQ=255)


                                                    gCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATg                                                   <  1:4155837/101‑1 (MQ=255)


                                                     cGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGc                                                  <  2:2932260/101‑1 (MQ=255)


                                                     cGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGc                                                  >  2:2592344/1‑101 (MQ=255)


                                                      gTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGcc                                                 >  1:2767650/1‑101 (MQ=255)


                                                      gTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGcc                                                 <  2:188795/101‑1 (MQ=255)


                                                      gTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCAACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGcc                                                 >  2:2093416/1‑101 (MQ=255)


                                                       tGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCt                                                >  1:4096346/1‑101 (MQ=255)


                                                       tGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAACCGGCGAAAAACGGCCATGccc                                                >  2:1784672/1‑100 (MQ=255)


                                                        ggATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCCTGCCTc                                               >  1:2748803/1‑101 (MQ=255)


                                                         gATCGAAACTTTTCTTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTcc                                              <  2:3730829/101‑1 (MQ=255)


                                                           tCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCgg                                            <  1:4016205/101‑1 (MQ=255)


                                                           tCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCgg                                            <  1:754927/101‑1 (MQ=255)


                                                             gAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCgggg                                          >  2:2053838/1‑100 (MQ=255)


                                                              aaaCTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGgtg                                         >  1:340984/1‑101 (MQ=255)


                                                                aCTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTc                                       >  2:2559239/1‑101 (MQ=255)


                                                                 cTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.t                                     >  1:2674950/1‑101 (MQ=255)


                                                                   tttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.Tgg                                   <  1:2623050/101‑1 (MQ=255)


                                                                   tttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.Tgg                                   >  1:3029040/1‑101 (MQ=255)


                                                                    ttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGc                                  <  2:277114/101‑1 (MQ=255)


                                                                      cGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTg                                <  1:4659510/101‑1 (MQ=255)


                                                                       gTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGt                               <  2:734053/101‑1 (MQ=255)


                                                                        tC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTc                              <  2:1927243/101‑1 (MQ=255)


                                                                           aTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGc                            >  1:4678377/1‑101 (MQ=255)


                                                                           aTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGc                            >  2:4650676/1‑101 (MQ=255)


                                                                             cTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTc                          <  2:3710130/101‑1 (MQ=255)


                                                                               gg.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTccc                        <  1:4949597/101‑1 (MQ=255)


                                                                                g.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTcccc                       <  2:859912/101‑1 (MQ=255)


                                                                                  cAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTccccc                      <  1:3683922/101‑1 (MQ=255)


                                                                                  cAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTccccc                      <  2:2723375/101‑1 (MQ=255)


                                                                                   aGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTcccccc                     <  1:1126323/101‑1 (MQ=255)


                                                                                   aGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGGGTC.TGGCTGTCGCTcccccc                     >  2:1665496/1‑101 (MQ=255)


                                                                                    ggCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCcg                    >  1:1839494/1‑101 (MQ=255)


                                                                                     gCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCcgc                   >  1:4768231/1‑101 (MQ=255)


                                                                                     gCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCcgc                   <  1:888463/101‑1 (MQ=255)


                                                                                     gCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCcgc                   >  2:3317709/1‑101 (MQ=255)


                                                                                     gCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCcgc                   >  2:2200038/1‑101 (MQ=255)


                                                                                       tcccgccgcGCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCgg                 <  1:2104315/98‑1 (MQ=255)


                                                                                          cgccgcCACGCTGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCggggg              <  1:5046818/101‑1 (MQ=255)


                                                                                           gccgccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGc             >  1:1323975/1‑101 (MQ=255)


                                                                                           gccgccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAACCGGCGAAAAACGGCCATGCCTCCCGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGc             <  1:4518753/101‑1 (MQ=255)


                                                                                               ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTgg         >  2:3078610/1‑101 (MQ=255)


                                                                                                 ccGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt       <  2:3183427/100‑1 (MQ=255)


                                                                                                 aCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt       <  2:4487606/101‑1 (MQ=255)


                                                                                                 aCGCTGCGTCGCACCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAGCGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGCGGCGTGGAt       <  1:838723/101‑1 (MQ=255)


                                                                                                 aCGCTGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt       <  2:1606980/101‑1 (MQ=255)


                                                                                                  cGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCAGACCTCCCGGTGGC.TGGCTGTCGTTGCCCCCGCGGGGGCGTGGATc      >  2:1279161/1‑101 (MQ=37)


                                                                                                   gcggCGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACGCTGCTGACACCGCCAACAAATATGGG.GTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATCg     <  1:4165079/98‑1 (MQ=2)


GGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTC.TGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA  >  NC_014034/1396065‑1396265

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG