New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1608051 =0 (0.000)78 (0.350) 29/184 13.4 1.00 intergenic (+321/‑26) RCAP_rcc01484/murD hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
?NC_014034 = 3053277 NA (NA)intergenic (+133/‑102) acsA3/RCAP_rcc02860 acetate‑‑CoA ligase/hypothetical protein
Rejected: Position hash score below cutoff.

TTTTTCCTGGCGCAACTACGCCACGGGGGTGCGGGGGTGTGAAACCCCCGCCGCTACGGGCGGGTCAAGAGCAACGGCCGGGGCAACACGGCCAAACCGCG  >  NC_014034/3053235‑3053335
                                          |                                                          
tgtttCATGGGGCAACTACGCCACGGGGGGGCGGGGGTGGGAAACCCCCGCCGCTACGGTCCGGTCCAGAGCAACGGCCGGGGTCAGGCCGCCAAAcagcg  >  2:2729435/3‑101 (MQ=0)
                                          |                                                          
TTTTTCCTGGCGCAACTACGCCACGGGGGTGCGGGGGTGTGAAACCCCCGCCGCTACGGGCGGGTCAAGAGCAACGGCCGGGGCAACACGGCCAAACCGCG  >  NC_014034/3053235‑3053335

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 8 ≤  ATCG  < 15 ≤  ATCG  < 34 ≤  ATCG