BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2330175	41 (0.170)	53 (0.220)	7/200	25.2	0.39	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	= 3276388	125 (0.510)	53 (0.220)	7/200	25.2	0.39	intergenic (‑140/+109)	RCAP_rcc03082/RCAP_rcc03083	lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 127 total aligned reads displayed.


CACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGG  >  NC_014034/3276288‑3276486


cACGGCGGGGGCAGGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGccccc                                                                                                           <  2:4003609/101‑1 (MQ=255)


 acgacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCc..g                                                                                                        >  2:920942/1‑101 (MQ=255)


   gacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCc..ggc                                                                                                      >  1:4419044/1‑101 (MQ=255)


     cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCc..ggcgg                                                                                                    >  2:4477788/1‑101 (MQ=255)


     cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCc..ggcgg                                                                                                    >  1:2790017/1‑101 (MQ=255)


      gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggg                                                                                                   >  1:1202710/1‑101 (MQ=255)


      gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggg                                                                                                   >  2:912480/1‑101 (MQ=255)


      gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggg                                                                                                   >  1:3749382/1‑101 (MQ=255)


      gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggg                                                                                                   >  2:3650777/1‑101 (MQ=255)


        gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggggg                                                                                                 >  1:3891948/1‑99 (MQ=255)


         ggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGcg                                                                                                >  1:5023402/1‑101 (MQ=255)


          gcacggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggggggg                                                                                               >  1:3735076/1‑97 (MQ=255)


          gcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCggggggg                                                                                               >  1:2533510/1‑97 (MQ=255)


           caaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCgggggggc                                                                                              >  2:1783351/1‑96 (MQ=255)


            aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGggccg                                                                                             >  2:5019614/1‑101 (MQ=255)


               gggcaaGGGGGC.CAAGGCCCCCCCGGCCACC.CGCCCCCCTTTTTTTTTGGCCCAAAATCCGCG.GGGGGCCGGGGGGG.GGACCCCCC..GGCGGGTCgccgcgc                                                                                          <  2:4138601/101‑1 (MQ=255)


                ggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCgggggggggccgg                                                                                         >  2:901222/1‑91 (MQ=255)


                 gcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCCTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCgccgcgccg                                                                                        >  2:4802606/1‑99 (MQ=255)


                  caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGgccccgcggc                                                                                       >  2:4636576/1‑101 (MQ=255)


                  caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCgccccgcggc                                                                                       >  1:709919/1‑101 (MQ=255)


                      ggcgccccaGGCCCCCCCGGCCACCGGGCCCCCTTTGCTTCTTGGCCC.AAAGACGCG.GGGGGTCGGGGGGG.GGACCCCCC..GGCGGGTCgccgcgcggccgc                                                                                    <  1:2480729/93‑1 (MQ=9)


                       cggcgCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGgccgcgcggccgcgc                                                                                  >  2:1060476/1‑101 (MQ=255)


                       cggcgCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCggcgggcggggggcc                                                                                  >  1:3048599/1‑95 (MQ=18)


                           gcAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCggcgcgcgggcgcgccggg                                                                              >  1:2981420/1‑97 (MQ=18)


                            cAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCGTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCgc.cgc.gg                                                                           >  1:4479152/1‑100 (MQ=255)


                             cccgCCCCCCGGACCCCC.GCCCCCCTTTTCTCGTGGGCCA.AAAGCCGGG.GGGGGGCGGGGGGC.GGCCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.Gaa                                                                          <  2:1320675/98‑1 (MQ=2)


                             aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGccgcgcggccgcgc.ggggga                                                                           >  2:2301041/1‑97 (MQ=255)


                             aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGGGCCGGCGCcc.gcc.gga                                                                          >  2:3970114/1‑99 (MQ=17)


                              aGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGccgcgcggccgcgc.gggggaa                                                                          >  1:602480/1‑96 (MQ=255)


                                gCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGGCCCcc.ggc.gggaca                                                                       >  1:4210183/1‑96 (MQ=17)


                                ccccccgGGGCCCCC.CGCCCCCTTTTTCTTTGGGCCC.AAACGCGGG.GGGGGGGGGGGGGG.GGGCCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAAc                                                                        <  1:4745071/100‑1 (MQ=2)


                                   ccccGGGCCCGC.CGCCCCCGTTTTTTC.GGGCCC.AAAAGCGCG.GGGGGGGCGGGGGG.GGGCCCCCCCGGGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACaaa                                                                     <  1:359346/101‑1 (MQ=2)


                                    cccGGCCACCC.GCCCCCGGTTTCTCCTGGCCCC.AAACCGGCG.GGGGGGCGGGGGGG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAgg                                                                   <  1:2082856/101‑1 (MQ=9)


                                       gggCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCCCGCGGCCGCGC.GGC.GCGAAAAAAgacc                                                                >  1:3248423/1‑101 (MQ=14)


                                          cAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAgacccac                                                             >  2:4668684/1‑101 (MQ=17)


                                           aaCC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGGGGCCGCGC.GGC.GGAACCAAAgaaccacc                                                            >  2:203974/1‑101 (MQ=14)


                                                ggCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGG.GGGACAAAAGACCGGCC.c.ggg                                                      >  1:2763320/1‑100 (MQ=14)


                                                 gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCCACC.G.GGcg                                                     >  1:2054420/1‑100 (MQ=17)


                                                 gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGAGCCACACGGCGCCGC.GGG.CCAAAAAACGAACGCCC.g.ggac                                                     >  1:3500198/1‑99 (MQ=2)


                                                  cccccGTTTTCTTTTGGCCC.AAAGTCGGC.GGGGGGTCGGGGGCGGGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCa                                                     <  2:4788516/101‑1 (MQ=17)


                                                     ccctttCTTTCTGGCCC.CAAGGCGGCGGGGGGTCGGGGGGC.GGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGcc                                                  <  2:2065538/98‑1 (MQ=16)


                                                     ccGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAGCCACC.G.GGCGGccc                                                 >  1:1126329/1‑101 (MQ=17)


                                                      cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACC.C.GGCAGcccc                                                >  2:577538/1‑101 (MQ=18)


                                                      cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAAAAAAAGAACGACC.G.GGCAGcccc                                                >  2:477515/1‑101 (MQ=17)


                                                       gTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGAAC.G.GGCAGgcccc                                               >  2:4420898/1‑101 (MQ=17)


                                                       gTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGGGGGCGCGC.GGG.GGGACAAAAGAACCACC.g.ggggggcccc                                               >  1:3565225/1‑93 (MQ=14)


                                                        tttCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCGCCCGGCCGCGC.GGC.GGAACAAAAGACCGAAC.G.GGCCGgccccc                                              >  2:2336150/1‑101 (MQ=17)


                                                        tttCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGGCGCGC.GGG.GGAACAAAACAGCCACC.G.CGGCGcccccc                                              >  1:4470947/1‑101 (MQ=14)


                                                        tttCTTCTTGGCCC.AAACACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGcccccc                                              <  2:3225190/101‑1 (MQ=255)


                                                         ttcttcTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCg                                             <  2:2401713/101‑1 (MQ=255)


                                                         ttcttcTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCGACC.G.GGGAGccccccc                                             >  1:1438317/1‑100 (MQ=18)


                                                          tcttctTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGTGCCCCGCCGGCGCGC.GGC.GGAAAAAAAGACCCACC.GCGGGGGCCCCCCg                                             >  1:1677843/1‑101 (MQ=9)


                                                          tcttctTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GCGAAAAAAGACCGACC.G.GGGGGcccccccc                                            >  1:159329/1‑99 (MQ=14)


                                                           cttcttGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGGCGCCCGGGCGCGG.GGG.GGAACAAAAGACCCCCC.C.GGCCGccccccccc                                           >  1:3003230/1‑98 (MQ=9)


                                                            ttcttGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGAACGACC.C.GGCAGcccccccgcc                                          >  1:2513781/1‑97 (MQ=17)


                                                             tcttGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAGGAACGACC.G.GGGGGcccccccgccc                                         >  1:3029863/1‑96 (MQ=17)


                                                             tcttGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCCCGCGGGCGCGC.GGCGGAAAAAAAGAACGAACC.G.GGCGACCCCCCggcg                                          >  2:4588113/1‑99 (MQ=9)


                                                                 ggCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGCCGCGC.GGG.GGAACAAAAGAACGACC.G.GGGCGCCCCCCCGCCGGccc                                     >  1:4837154/1‑100 (MQ=17)


                                                                  gcccaaaggccGCG.GGGGGCCGGGGGGC.GGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCa                                     <  1:2130475/91‑1 (MQ=21)


                                                                  gcccaaaaTGCGCG.GGGGGACGGGGGGC.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCa                                     <  2:3734798/96‑1 (MQ=21)


                                                                   ccc.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGAACGACC.C.GGCAGCCCCCCCGGCGGcccgg                                   >  1:3756214/1‑98 (MQ=17)


                                                                    ccaaagggcGCG.GGGGGCCGGGGGGC.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGt                                   <  2:3749104/93‑1 (MQ=25)


                                                                     caaaacgcggc.GGGGGGCCGGGGGG.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTg                                  <  2:3063098/91‑1 (MQ=25)


                                                                     c.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGCCCGCGCGGCC.CGCGGGC.GAAACAAAAGAACCAAC.A.GGGGGGCCCCCGGCCGGccccggc                                 >  2:4027009/1‑96 (MQ=9)


                                                                     c.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGAACGACC.C.GGCAGCCCCCCGGGCGGCCAGTGa                                 >  2:1366203/1‑101 (MQ=18)


                                                                       aaaTACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGGGCCCCGCCGCCGCGC.GGC.GGAACAAAAGACCGACC.C.GGCCGCCCCCCCGGCgggccgggaa                                >  2:2232435/1‑93 (MQ=12)


                                                                        aagccGCG.GGGGGCCGGGGGGC.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAAc                               <  2:5050005/97‑1 (MQ=25)


                                                                        aaTACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAACGACCGG.GGCGGCCCCCCGG.CGGGCAGGGAAc                               >  2:3670262/1‑101 (MQ=17)


                                                                        aaTACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAAGACCCACC.G.GGCCGCCCCCCCGGCGGcccggggac                               >  1:3503394/1‑94 (MQ=17)


                                                                          accggc.GGGGGGCCGGGGGG.GGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAAcc                              <  1:594058/96‑1 (MQ=25)


                                                                           aCGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGGGCGGCCGCGC.CGC.GGCACAAACGCGAGACC.C.CGGAGCCCCCCCCTCGGCCAGAGAAccca                            >  1:5047173/1‑100 (MQ=9)


                                                                           aCGCC.GGGGGTCCAGGGGC.GGAGCCCCC..GGCGGGGGGCCCGGCGGCCGCGCGGGG.GAAAAAAAGACCCAACC.G.GGAAGCCCCCCGGGGGGCCAG.GAACCCg                            >  2:2881707/1‑101 (MQ=12)


                                                                              cc.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGGCCGACC.G.GGCCGCCCCCCCGCCGGCCCGGGAAcccccaa                         >  1:4544294/1‑97 (MQ=18)


                                                                                 gggggTCCGGGGGC.GGAGCCCCC..GGCGGGGCGGCGCGCGGGCGCGC.GGG.GGAACAAAAGACCGCCC.C.GGGAGGCCCCCCGCCGGCCCGGGAAccccacaac                       >  2:65735/1‑95 (MQ=12)


                                                                                 gggggTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCGACC.G.GGGAGCCCCCCGCGCGGGCCGGGAACCCGCAAcg                       >  2:2736422/1‑101 (MQ=18)


                                                                                 gggggTCCGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GGAACAAAAGAACGACC.G.GGCAGCCCCCCCGCCGGCCCGGGAAACCCaaaac                       >  1:4698820/1‑99 (MQ=18)


                                                                                  ggggTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACC.G.GGCAGCCCCCCCGCCGGCCCGGGGACCCGCAAccc                      >  1:2237811/1‑99 (MQ=18)


                                                                                    gggcggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga                   <  2:4976707/96‑1 (MQ=38)


                                                                                    ggccggggggC.GGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.Ga                   <  2:319579/96‑1 (MQ=255)


                                                                                      tCCGGGGGC.GGGCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAg                 <  2:1144984/101‑1 (MQ=255)


                                                                                       ccGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGACCGACC.C.GGCCGCCCCCCCGGCGGCCCGGGAACCCCAAACGC.GAAgg                >  1:1237373/1‑101 (MQ=21)


                                                                                        ggggggG.GGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAggg               <  1:1783484/100‑1 (MQ=38)


                                                                                        cGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACC.G.GGCCGCCCCCCGGGCGGCCCGGGGACCCGAAACGC.GAAggg               >  1:298551/1‑101 (MQ=25)


                                                                                        cGGGGGC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACC.G.GGCAGCCCCCCCGGCGGCCCGTGAACCCGCAACGC.GAAggg               >  1:1616311/1‑101 (MQ=25)


                                                                                         gggggC.GGAGCCCCC..GGCGGGTCGCCCCCCGGGCGCGC.GGC.GGAAAAAAAGACCCACC.C.GGGAGGCCCCCCGCCGGCCACTGAACCCCAAAcgccgcggga               >  2:44585/1‑94 (MQ=12)


                                                                                          ggggG.GGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAc             <  1:5048783/101‑1 (MQ=255)


                                                                                           gggC.GGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACC.C.GGCAGCCCCCCGGGCGGCCCGTGAACCCCAAACGCGGAAgggcg             >  2:4844744/1‑99 (MQ=25)


                                                                                            ggcgccccccccg..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAACCGC.GAAGGGAcg            <  1:2736623/93‑1 (MQ=38)


                                                                                             gcgcgtcccccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAcgc           <  2:143295/94‑1 (MQ=255)


                                                                                              c.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACC.G.GGCAGGCCCCCGGCCGGCCAGTGAACCCGAAACGC.GAAGGGACGCgg         >  2:3239977/1‑101 (MQ=38)


                                                                                                ggAGCCCCC..GGCGGGTCCCCGCGCGGCCGCGC.GGG.GAAACAAAAGAGCGACC.G.GGGAGGCCCCCGGGCGGCCCAGGAAACCCAAACGA.CAAGGGACGCggg        >  2:4513327/1‑101 (MQ=16)


                                                                                                ggAGCCCCC..GGCGGGGCGCCGCGCCGCCCCGC.GGC.GAAAAAAAGGACGGAAC.G.GGCAGCCCCCCCGCCCGGCCGGGGACCCCAAACGC.GAAggggagccgg        >  2:3313133/1‑94 (MQ=255)


                                                                                                gcccccccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCggg        <  1:2855588/97‑1 (MQ=255)


                                                                                                 gAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACC.G.GGGAGCCCCCCGGTCGGCCAGTGCACCCCAAACGC.GAAGGGCAGCgggg       >  2:652187/1‑100 (MQ=37)


                                                                                                  aGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACC.G.GGCAGCCCCCCGGGCGGCCAGGGAACCCGAAAAGC.GAAGGGACGCggggg      >  1:3120296/1‑99 (MQ=38)


                                                                                                  aGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACC.G.GGCAGCCCCCCCGGCGGCCCGGGAACCCGAAACGC.GAAGGGACCCGGGac      >  2:670209/1‑100 (MQ=37)


                                                                                                   gCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATc     <  2:2054272/101‑1 (MQ=255)


                                                                                                   cccccg..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATc     <  2:146526/100‑1 (MQ=255)


                                                                                                    tcccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCg    <  1:978148/100‑1 (MQ=255)


                                                                                                      ccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCggg  <  1:809635/101‑1 (MQ=255)


CACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGC.GGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACC.G.GGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGG  >  NC_014034/3276288‑3276486

Base quality scores:


ATCG

< 3 ≤


ATCG

< 22 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG