New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2880583 =14 (0.070)66 (0.310) 23/174 14.8 0.50 coding (1002/1053 nt) pdxA 4‑hydroxythreonine‑4‑phosphate dehydrogenase
?NC_014034 = 3276393 118 (0.480)intergenic (‑145/+104) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 139 total aligned reads displayed.

CGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATCCCT  >  NC_014034/3276293‑3276493
                                                                                                         |                                                                                                         
cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCc..ggcgg                                                                                                           >  1:2790017/1‑101 (MQ=255)
cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCc..ggcgg                                                                                                           >  2:4477788/1‑101 (MQ=255)
 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggg                                                                                                          >  1:1202710/1‑101 (MQ=255)
 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggg                                                                                                          >  1:3749382/1‑101 (MQ=255)
 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggg                                                                                                          >  2:3650777/1‑101 (MQ=255)
 gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggg                                                                                                          >  1:2401887/1‑101 (MQ=255)
    ggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGcg                                                                                                       >  1:5023402/1‑101 (MQ=255)
     gcacggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggggggg                                                                                                      >  1:3735076/1‑97 (MQ=255)
      caaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCgggggggc                                                                                                     >  2:1783351/1‑96 (MQ=255)
       aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGggccg                                                                                                    >  2:5019614/1‑101 (MQ=255)
         ggggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCggggggcgccc                                                                                                  >  1:1842478/1‑93 (MQ=255)
          gggcaaGGGGGC.CAAGGCCCCCCCGGCCACC.CGCCCCCCTTTTTTTTTGGCCCAAAATCCGCG.GGGGGCCGGGGGGGGGACCCCCC..GGCGGGTCgccgcgc                                                                                                 <  2:4138601/101‑1 (MQ=255)
           ggcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCgggggggggccgg                                                                                                >  2:901222/1‑91 (MQ=255)
            gcaaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCCTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCgccgcgccg                                                                                               >  2:4802606/1‑99 (MQ=255)
             caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGgccccgcggc                                                                                              >  2:4636576/1‑101 (MQ=255)
             caaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCgccccgcggc                                                                                              >  1:709919/1‑101 (MQ=255)
              aaTGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGggcgcccggcc                                                                                             >  1:4101993/1‑101 (MQ=21)
                tGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGggcgcgcggcccc                                                                                           >  1:4756449/1‑99 (MQ=255)
                 ggcgccccaGGCCCCCCCGGCCACCGGGCCCCCTTTGCTTCTTGGCCC.AAAGACGCG.GGGGGTCGGGGGGGGGACCCCCC..GGCGGGTCgccgcgcggccgc                                                                                           <  1:2480729/93‑1 (MQ=9)
                  cggcgCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGgccgcgcggccgcgc                                                                                         >  2:1060476/1‑101 (MQ=255)
                  cggcgCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCggcgggcggggggcc                                                                                         >  1:3048599/1‑95 (MQ=18)
                       cAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCGTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCgc.cgc.gg                                                                                  >  1:4479152/1‑100 (MQ=255)
                        cccgCCCCCCGGACCCCC.GCCCCCCTTTTCTCGTGGGCCA.AAAGCCGGG.GGGGGGCGGGGGGCGGCCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.Gaa                                                                                 <  2:1320675/98‑1 (MQ=2)
                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGccgcgcgggcgcgc.ggggga                                                                                  >  2:3370271/1‑97 (MQ=255)
                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGccgcgcggccgcgc.ggggga                                                                                  >  2:2301041/1‑97 (MQ=255)
                        aaGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGCCGGCGCcc.gcc.gga                                                                                 >  2:3970114/1‑99 (MQ=17)
                         gggCCCCCGGGCCACCC.GGCCCCGGTTTCTGCTGGGCGA.AAACCCGCG.GGGGGTCGGGGGGGGGGGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.Gaaa                                                                                <  1:3262919/100‑1 (MQ=9)
                           ccccccgGGGCCCCC.CGCCCCCTTTTTCTTTGGGCCC.AAACGCGGG.GGGGGGGGGGGGGGGGGCCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAAc                                                                               <  1:4745071/100‑1 (MQ=2)
                            ccccccGGGCCCCC.GGCCCCCGTTTTTTCTTGGCCC.AAAGCCGGC.GGGGGGCCGGGGGGGGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACa                                                                              <  1:1558632/101‑1 (MQ=11)
                            ccccccGGGCAACC.GGCCCCCGTTTCTTCTGGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCGCGGCGGCCGCGC.CGG.GGAACaa                                                                             >  1:4492340/1‑101 (MQ=17)
                              cccgGGCCACCC.GCCCCCCTTTTCTTCTGGCCCA.AAACCCGCG.GGGGGCCGGGGGGCGGACCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAg                                                                           <  2:4773814/101‑1 (MQ=9)
                              ccccGGGCCCGC.CGCCCCCGTTTTTTC.GGGCCC.AAAAGCGCG.GGGGGGGCGGGGGGGGGCCCCCCCGGGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACaaa                                                                            <  1:359346/101‑1 (MQ=2)
                               cccGGCCACCC.GCCCCCGGTTTCTCCTGGCCCC.AAACCGGCG.GGGGGGCGGGGGGGGGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAgg                                                                          <  1:2082856/101‑1 (MQ=9)
                                 cGGGCCCCC.GCCCCCGGTTTCTTCTGGCCCA.AAATCCGCG.GGGGGCCGGGGGGCGGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGgac                                                                        <  1:564834/101‑1 (MQ=14)
                                      aaCC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGGGGCCGCGC.GGC.GGAACCAAAgaaccacc                                                                   >  2:203974/1‑101 (MQ=14)
                                            gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCCACCG.GGcg                                                             >  1:2054420/1‑100 (MQ=17)
                                            gCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGAGCCACACGGCGCCGC.GGG.CCAAAAAACGAACGCCCg.ggac                                                             >  1:3500198/1‑99 (MQ=2)
                                              ccccGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCGCGGGCGCCG.GGG.GGGACAAAAGACCCACCc.gggcgc                                                           >  1:2624912/1‑97 (MQ=11)
                                                ccctttCTTTCTGGCCC.CAAGGCGGCGGGGGGTCGGGGGGCGGGCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.Gcc                                                         <  2:2065538/98‑1 (MQ=16)
                                                ccGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGAGCCACCG.GGCG.Gccc                                                        >  1:1126329/1‑101 (MQ=17)
                                                 cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACCC.GGCA.Gcccc                                                       >  2:577538/1‑101 (MQ=18)
                                                 cGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAAAAAAAGAACGACCG.GGCA.Gcccc                                                       >  2:477515/1‑101 (MQ=17)
                                                  gTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGAACG.GGCA.Ggcccc                                                      >  2:4420898/1‑101 (MQ=17)
                                                  gTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGGGGGCGCGC.GGG.GGGACAAAAGAACCACCg.ggggggcccc                                                       >  1:3565225/1‑93 (MQ=14)
                                                   tttCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCCCGGCCGCGC.GGC.GGAACAAAAGACCGAACG.GGCC.Ggccccc                                                     >  2:2336150/1‑101 (MQ=17)
                                                   tttCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCCCGGGCGCGC.GGG.GGAACAAAACAGCCACCG.CGGC.Gcccccc                                                     >  1:4470947/1‑101 (MQ=14)
                                                   tttCTTCTTGGCCC.AAACACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.Gcccccc                                                     <  2:3225190/101‑1 (MQ=255)
                                                    ttcttcTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCGACCG.GGGA.Gccccccc                                                    >  1:1438317/1‑100 (MQ=18)
                                                     tcttctTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGTGCCCCGCCGGCGCGC.GGC.GGAAAAAAAGACCCACCGCGGGG.GCCCCCCg                                                    >  1:1677843/1‑101 (MQ=9)
                                                      cttcttGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGGCGCCCGGGCGCGG.GGG.GGAACAAAAGACCCCCCC.GGCC.Gccccccccc                                                  >  1:3003230/1‑98 (MQ=9)
                                                       ttcttGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCGCGGCCCCGC.GGC.GGAACAAAAGAACGACCC.GGCA.Gcccccccgcc                                                 >  1:2513781/1‑97 (MQ=17)
                                                        tcttGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCGCGCGGCCGCGC.GGC.GGAACAAAGGAACGACCG.GGGG.Gcccccccgccc                                                >  1:3029863/1‑96 (MQ=17)
                                                        tcttGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGGCCCCGCGGGCGCGC.GGCGGAAAAAAAGAACGAACCG.GGCG.ACCCCCCggcg                                                 >  2:4588113/1‑99 (MQ=9)
                                                            ggCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGGCGCGCGGCCGCGC.GGG.GGAACAAAAGAACGACCG.GGGC.GCCCCCCCGCCGGccc                                            >  1:4837154/1‑100 (MQ=17)
                                                             gcccaaaaTGCGCG.GGGGGACGGGGGGCGGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCa                                            <  2:3734798/96‑1 (MQ=21)
                                                              ccc.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAGGAACGACCC.GGCA.GCCCCCCCGGCGGcccgg                                          >  1:3756214/1‑98 (MQ=17)
                                                               ccaaagggcGCG.GGGGGCCGGGGGGCGGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGt                                          <  2:3749104/93‑1 (MQ=25)
                                                                caaaacgcggc.GGGGGGCCGGGGGGGGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTg                                         <  2:3063098/91‑1 (MQ=25)
                                                                c.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGGCCCGCGCGGCC.CGCGGGC.GAAACAAAAGAACCAACA.GGGG.GGCCCCCGGCCGGccccggc                                        >  2:4027009/1‑96 (MQ=9)
                                                                   aagccGCG.GGGGGCCGGGGGGCGGCCCCCCG..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAAc                                      <  2:5050005/97‑1 (MQ=25)
                                                                   aaTACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAAAAAAAGACCCACCG.GGCC.GCCCCCCCGGCGGcccggggac                                      >  1:3503394/1‑94 (MQ=17)
                                                                   aaTACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCCCGCGGGCCCGC.GGC.GCAACAAAAGACCGACCG.GGCACGCCCCCCGG.CGGCCAGAGAAc                                      >  2:3193679/1‑101 (MQ=18)
                                                                     accggc.GGGGGGCCGGGGGGGGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAAcc                                     <  1:594058/96‑1 (MQ=25)
                                                                      aCGCC.GGGGGTCCAGGGGCGGAGCCCCC..GGCGGGGGGCCCGGCGGCCGCGCGGGG.GAAAAAAAGACCCAACCG.GGAA.GCCCCCCGGGGGGCCAG.GAACCCg                                   >  2:2881707/1‑101 (MQ=12)
                                                                        gCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GAAAAAAAAGACCCACCC.GGCA.GCCCCCCGGGCGGGCCGTGGAACCgca                                 >  2:2108827/1‑99 (MQ=17)
                                                                          c.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGGCCGCGCGGGGGCGCGC.GGC.GGAACAAAAGACCGACCG.GGCA.GGCCCCCCGGCGGCCCGGGAAACCGaaaa                               >  2:2394065/1‑100 (MQ=16)
                                                                            gggggTCCGGGGGCGGAGCCCCC..GGCGGGGCGGCGCGCGGGCGCGC.GGG.GGAACAAAAGACCGCCCC.GGGA.GGCCCCCCGCCGGCCCGGGAAccccacaac                              >  2:65735/1‑95 (MQ=12)
                                                                            gggggTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGGCGCGC.GGC.GGAACAAAAGACCGACCG.GGGA.GCCCCCCGCGCGGGCCGGGAACCCGCAAcg                              >  2:2736422/1‑101 (MQ=18)
                                                                            gggggTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCCCGGCCGCGC.GGC.GGAACAAAAGAACGACCG.GGCA.GCCCCCCCGCCGGCCCGGGAAACCCaaaac                              >  1:4698820/1‑99 (MQ=18)
                                                                             ggggTCCGGGGGCGGAGCCCCC..GGCGGGTCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACCG.GGCA.GCCCCCCCGCCGGCCCGGGGACCCGCAAccc                             >  1:2237811/1‑99 (MQ=18)
                                                                              gggTCCGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACCG.GGCA.GCCCCCCGGGCGGCCAGCGAACCCGCAAcgc.g                           >  2:4818504/1‑101 (MQ=25)
                                                                                 tCCGGGGGCGGGCCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAg                        <  2:1144984/101‑1 (MQ=255)
                                                                                   cGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGG.GGAACAAAAGACCGACCG.GGCA.GCCCCCCCGCCGGCCCGGGGACCCCCAACGC.GAAggg                      >  1:2876115/1‑101 (MQ=21)
                                                                                   cGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACCG.GGCC.GCCCCCCGGGCGGCCCGGGGACCCGAAACGC.GAAggg                      >  1:298551/1‑101 (MQ=25)
                                                                                   cGGGGGCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCCCGC.GGC.GGAACAAAAGACCGACCG.GGCA.GCCCCCCCGGCGGCCCGTGAACCCGCAACGC.GAAggg                      >  1:1616311/1‑101 (MQ=25)
                                                                                    gggggCGGAGCCCCC..GGCGGGTCGCCCCCCGGGCGCGC.GGC.GGAAAAAAAGACCCACCC.GGGA.GGCCCCCCGCCGGCCACTGAACCCCAAAcgccgcggga                      >  2:44585/1‑94 (MQ=12)
                                                                                     ggggGGGACCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAc                    <  1:5048783/101‑1 (MQ=255)
                                                                                      gggCGGCGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAcg                   <  2:1303914/101‑1 (MQ=255)
                                                                                      gggCGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACCC.GGCA.GCCCCCCGGGCGGCCCGTGAACCCCAAACGCGGAAgggcg                    >  2:4844744/1‑99 (MQ=25)
                                                                                      ggcgccccccccg..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAACCGC.GAAGGGAcg                   <  1:2736623/93‑1 (MQ=38)
                                                                                       gcgcgtcccccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGAcgc                  <  2:143295/94‑1 (MQ=255)
                                                                                         cGGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACCG.GGCA.GGCCCCCGGCCGGCCAGTGAACCCGAAACGC.GAAGGGACGCgg                >  2:3239977/1‑101 (MQ=38)
                                                                                         cGGAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAGGACCGACCG.GGCA.GCCCCCCGGGCGGCCCGGGAACCCGGAAAGC.GAAAGGACGCgg                >  2:708113/1‑101 (MQ=37)
                                                                                          ggAGCCCCC..GGCGGGTCCCCGCGCGGCCGCGC.GGG.GAAACAAAAGAGCGACCG.GGGA.GGCCCCCGGGCGGCCCAGGAAACCCAAACGA.CAAGGGACGCggg               >  2:4513327/1‑101 (MQ=16)
                                                                                          gcccccccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCggg               <  1:2855588/97‑1 (MQ=255)
                                                                                           gAGCCCCC..GGCGGGGCGCCGCGCGGCCGCGC.GGC.GGAACAAAAGACCGACCG.GGGA.GCCCCCCGGTCGGCCAGTGCACCCCAAACGC.GAAGGGCAGCgggg              >  2:652187/1‑100 (MQ=37)
                                                                                            ggcgcggggggcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCggg               <  1:2525069/92‑1 (MQ=255)
                                                                                            aGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAAGACCGACCG.GGCA.GCCCCCCGGGCGGCCAGGGAACCCGAAAAGC.GAAGGGACGCggggg             >  1:3120296/1‑99 (MQ=38)
                                                                                             gccccgcgggcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGa              <  2:4418737/93‑1 (MQ=255)
                                                                                             cccccg..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATc            <  2:146526/100‑1 (MQ=255)
                                                                                              tcccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCg           <  1:978148/100‑1 (MQ=255)
                                                                                                ccc..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCggg         <  1:809635/101‑1 (MQ=255)
                                                                                                   cgggcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCgggc        <  1:4076526/99‑2 (MQ=255)
                                                                                                    gggcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGa       <  1:1366329/100‑1 (MQ=255)
                                                                                                     ggcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGAt      <  2:3564955/101‑1 (MQ=255)
                                                                                                      gcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATc     <  2:2789815/101‑1 (MQ=255)
                                                                                                      gcggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATc     <  1:11893/101‑1 (MQ=255)
                                                                                                       cggGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATcc    <  2:1438190/101‑1 (MQ=255)
                                                                                                        gggTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATccc   >  2:2158555/1‑101 (MQ=255)
                                                                                                         ggTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCCGTGAACCCGAAACGC.GAAGGGACGCGGGAGCGGGGATCCCt  >  2:4082993/1‑101 (MQ=255)
                                                                                                         |                                                                                                         
CGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACC.GGCCCCCGTTTCTTCTTGGCCC.AAATACGCC.GGGGGTCCGGGGGCGGAGCCCCC..GGCGGGTCGCCGCGCGGCCGCGC.GGC.GAAACAAAGGACCGACCG.GGCA.GCCCCCCGGTCGGCCAGTGAACCCGAAACGC.GAAGGGACGCGGGATCGGGGATCCCT  >  NC_014034/3276293‑3276493

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG