BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 744683	106 (0.500)	58 (0.270)	29/174	12.6	0.44	intergenic (+68/+144)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
*	?	NC_014034	= 2330277	42 (0.170)	58 (0.270)	29/174	12.6	0.44	intergenic (+252/+60)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 110 total aligned reads displayed.


GGCCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....G....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.CAGGGATCCGAAGGT  >  NC_014034/2330177‑2330372


gcccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg                                                                                                              >  2:4928537/3‑101 (MQ=255)


gcccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg                                                                                                              <  2:4792911/99‑1 (MQ=255)


 cccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGa                                                                                                             <  1:751538/100‑1 (MQ=255)


   cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtc                                                                                                           <  1:3103278/101‑1 (MQ=255)


    ccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcc                                                                                                          <  1:4691920/101‑1 (MQ=255)


    ccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcc                                                                                                          <  1:1833491/101‑1 (MQ=255)


     cGCGCCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc                                                                                                         <  1:886004/101‑1 (MQ=255)


         cccccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGTCCAAAGAtcccgggg                                                                                                     >  1:4189450/1‑101 (MQ=255)


           cccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggt                                                                                                   <  1:3726598/101‑1 (MQ=255)


            ccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtc                                                                                                  <  1:5010985/101‑1 (MQ=255)


            ccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtc                                                                                                  >  2:3310597/1‑101 (MQ=255)


             cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                 >  2:4643064/1‑101 (MQ=255)


             cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                 >  2:1856426/1‑101 (MQ=255)


             cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                 >  1:3071985/1‑101 (MQ=255)


             cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                 <  2:2848962/101‑1 (MQ=255)


             cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                 >  1:4060723/1‑101 (MQ=255)


              ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                                <  1:494801/101‑2 (MQ=255)


              ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                                >  2:4465280/1‑100 (MQ=255)


              ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                                <  1:3463993/101‑2 (MQ=255)


               gCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgg                                                                                               >  2:680686/1‑99 (MQ=255)


               gCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCCGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgg                                                                                               >  2:3883660/1‑99 (MQ=255)


                cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggg                                                                                              >  1:2095716/1‑101 (MQ=255)


                cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGACCGGGCGGCTTTCACCTGGGGCCAAAGagcccggggg.cccggg                                                                                             >  1:1243605/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                             <  2:1355668/101‑1 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                             >  2:1617953/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                             >  1:3558229/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                             >  1:1083392/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGATTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                             >  1:420121/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCAGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGGTTTAACCTGGGGCCAAAAAtcccaggggccgcggg                                                                                             >  2:2899791/1‑101 (MQ=255)


                  tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGGTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..g                                                                                          >  2:4806721/1‑101 (MQ=255)


                  tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCCAAGAtcccgggggtccgggg..g                                                                                          <  1:2877999/101‑1 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc                                                                                         >  1:3796001/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc                                                                                         >  1:398041/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc                                                                                         >  1:3216029/1‑100 (MQ=255)


                    tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcg                                                                                        >  1:2833928/1‑99 (MQ=255)


                     ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGTGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgg                                                                                       <  2:1885281/101‑4 (MQ=255)


                     ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgg                                                                                       <  1:1953920/101‑4 (MQ=255)


                     ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgg                                                                                       <  1:3131388/101‑4 (MQ=255)


                      tGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgga                                                                                      >  1:617605/1‑97 (MQ=255)


                       gcgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggag                                                                                     >  1:979781/1‑96 (MQ=255)


                        cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagc                                                                                    >  1:4920644/1‑95 (MQ=255)


                        cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagc                                                                                    <  1:355764/101‑7 (MQ=255)


                         gcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcc                                                                                   >  2:4969887/1‑94 (MQ=255)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGTCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc                                                                                  <  2:2713917/101‑9 (MQ=38)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc                                                                                  <  2:1804799/101‑9 (MQ=255)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc                                                                                  <  2:1180522/101‑9 (MQ=255)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc                                                                                  >  2:3844619/1‑93 (MQ=255)


                           cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcccc                                                                                 >  1:5008006/1‑92 (MQ=38)


                           cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcccc                                                                                 >  2:3532475/1‑92 (MQ=38)


                            aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc                                                                                <  1:4873656/101‑11 (MQ=38)


                            aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc                                                                                >  1:1325208/1‑91 (MQ=38)


                             aGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....G....cggagcccccg                                                                      <  1:3618665/101‑11 (MQ=38)


                             aGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....G....cggagcccccg                                                                      <  2:4839135/101‑11 (MQ=38)


                                    gCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTc                                                                    <  2:3977837/101‑1 (MQ=25)


                                    gCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTc                                                                    <  2:4527515/101‑1 (MQ=25)


                                       ggggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAGCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGcc                                                                 >  1:3519875/1‑101 (MQ=25)


                                        gggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCg                                                                >  1:3734938/1‑101 (MQ=25)


                                            gcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.c                                                           <  1:4047848/101‑1 (MQ=25)


                                              gcATGCGGGGCCCCGGATCCCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CAt                                                         <  2:2842084/101‑1 (MQ=21)


                                              gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGccccgggga                                                          >  2:4490551/1‑94 (MQ=18)


                                              gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGCgggcc                                                          >  1:1916078/1‑98 (MQ=21)


                                               cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGCCGGGG.Cagc                                                        >  2:2963620/1‑99 (MQ=21)


                                                   gggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCt                                                    <  2:1949216/100‑1 (MQ=21)


                                                   cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCt                                                    <  2:4871098/101‑1 (MQ=25)


                                                    ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTc                                                   <  2:3760319/101‑1 (MQ=25)


                                                        ccccGGATCCCCGGCGGCCCGGGCGTCTCTCCCGGGGGGCAAAAGCCCCGGGGGGTCGGGGGGCG....GCC..CCCCCGGCGGGTCTCCGAGG.CATCGCCTCGGCg                                               <  2:4648946/101‑1 (MQ=255)


                                                          ccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGaa                                             <  2:2423393/101‑1 (MQ=25)


                                                           cGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCCGGG.CCTCGCCCCCGCGgaa                                            >  1:208004/1‑101 (MQ=12)


                                                              aTCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCCGGG.GAGCGCCCCGGGGaaaaac                                         >  1:2965108/1‑98 (MQ=9)


                                                               tCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGAGTCGCCGAGG.CATCGCCTCGGCGAAATccc                                        <  1:4493882/101‑1 (MQ=25)


                                                               tCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGCCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATccc                                        <  2:3129602/101‑1 (MQ=21)


                                                               ccccgggcggcCGGGGCGGCTTTCCCCGGGGCCAAAAGACCCGGGGGGCCGGGGG..G....GGGGCCCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATccc                                        <  1:2606103/96‑1 (MQ=12)


                                                                 gcgggcggcCCGGGCGTGTTTCCCCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCtt                                      <  2:175083/98‑1 (MQ=18)


                                                                 cccGGCGGCCGGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCtt                                      <  2:4152876/100‑1 (MQ=21)


                                                                 aCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGACCCCGGGGGGCCGGGG..GCGGAG....CCACCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCtt                                      <  1:3310859/101‑1 (MQ=255)


                                                                   cggcggCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAg                                    <  2:564892/101‑1 (MQ=25)


                                                                    ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGCCGCCGCGGCCACCCCCCGGGCGAAACCCCttgt                                    >  2:3903631/1‑99 (MQ=9)


                                                                      cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTaa                                 <  2:740959/101‑1 (MQ=25)


                                                                        gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAg                               <  1:4739205/101‑1 (MQ=21)


                                                                        gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGGGG.CAGCGCCCCGGCGGAATCCCCTAGTaaaa                               >  2:466379/1‑100 (MQ=12)


                                                                         ccggggCGGCTTTCACCGGGGCCCAAAGACCCCGGGGGTCGGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.a                             <  2:3215778/98‑1 (MQ=18)


                                                                           cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.Acc                           <  1:4636947/101‑1 (MQ=25)


                                                                            gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGCCGAGG.CGTCGCCTCGGCGGAAACCCCTAGTAAAA.Accc                          >  1:2168820/1‑100 (MQ=12)


                                                                               cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.Accgccc                       <  2:446753/101‑1 (MQ=25)


                                                                               cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGGGG.CATCGCCTCCGCCAAAAACCCTAGTaaaaaaccccc                        >  1:3392046/1‑93 (MQ=9)


                                                                                 gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGCGG.CAACGCCCCCGCGGAAACCCCTAGTAAAA.Accgcccgc                     >  1:3910916/1‑101 (MQ=9)


                                                                                   tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGCCGGGG.GCGCGCTTCGGCGGAATTCCCTAGTAACG.aacctccgccg                   >  2:4889942/1‑91 (MQ=2)


                                                                                   tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGGGG.CCACGCCCCCGCGAAAACCCTTATTAAAA.Acaaaccccgg                   >  2:4216937/1‑92 (MQ=2)


                                                                                     tCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGCCGAGG.CGTCGCCTCGGCGGAAACCCCTAGTAAAGAACCCCCcgcgac                  >  2:1178479/1‑99 (MQ=9)


                                                                                     cgaCCTGGGCCGAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.c                <  2:1501919/99‑1 (MQ=18)


                                                                                      cACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCCGGG.GATCGCCCCCGCGGAAACCCCTTGTAAAA.Aacgcccgccggca                >  2:3665165/1‑96 (MQ=2)


                                                                                         cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.CAggg            <  2:2198929/101‑1 (MQ=21)


                                                                                         cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGCGG.GATCGCCTCCGCCGAAACCCCTCGTAAAA.Aacgccccccgggcagg             >  1:1913742/1‑91 (MQ=0)


                                                                                           ggggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGCCGGGG.CCTCGCCCCGGCGAAAACCCCTAGTAAAA.ACCGACCCCGGG.CACGGaa          >  2:420162/1‑100 (MQ=2)


                                                                                            gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGGGGCCGGG.CATCGCCCCGGGGGAAACCCTTCGTTAAG.AACGCCCCCGGG.CAGGGGTc         >  1:2476392/1‑101 (MQ=2)


                                                                                             ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.CAGGGATcc        <  2:4305162/101‑1 (MQ=21)


                                                                                              gCCAAAGACCCCGGGGGTCGGGGG..GCGGAG....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.CAGGGATCCg       <  1:1618085/101‑1 (MQ=21)


                                                                                                cAAAGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGGGG.GATCGCCTCGGCGGAAACCCTTTTTTAAA.ACCGCCCCCGGG.CAGGGAGCCGaa     >  1:4519947/1‑101 (MQ=2)


                                                                                                  aaGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGCGG.CATCGCCTCCGCGAAATCCCTTAGTAAAA.AACGCCCCCGGACCAGGGA.CCGAAgg   >  2:2982340/1‑101 (MQ=9)


                                                                                                   aGATCCCGGGGGTCCGGGG..GCGGAG....CCCCCGGCGGGGCGCCGAGG.CATCGCCCCGGCGGAAACCCTTAGTAAAA.ACCGCCCGCGGG.CAAGGGTCCGAAggc  >  2:397724/1‑100 (MQ=12)


GGCCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....G....CCCCCGGCGGGTCGCCGAGG.CATCGCCTCGGCGAAATCCCTTAGTAAAG.ACCGCCCGCGGA.CAGGGATCCGAAGGT  >  NC_014034/2330177‑2330372

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG