New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 222049 =1564 (4.860)0 (0.000) 2/180 38.4 0.00 coding (608/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222119 363 (1.010)coding (538/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

GTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGA............................  <  NC_014034/222148‑222049
..............................................................................................................CCGACCGATCCCACGGAT  <  NC_014034/222119‑222102
                                                                                                    ||||||||||                  
GTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGATCCGACCGACCCTCCGGACCCGACCGAC                             >  1:2539057/1‑101 (MQ=255)
     ACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGACCCCACGGACCCCACCGACCCCAC                        >  1:4019465/1‑101 (MQ=0)
        GATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCCACGGACCCCACGca                     >  1:1508018/1‑99 (MQ=12)
              ACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGACCCCACGGACCCGcc               >  1:7088935/1‑99 (MQ=1)
                  GCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGACCCCACGGACCCGACCcac           >  1:853303/1‑98 (MQ=0)
                           ACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGAGCCCACGGACCCGACCGAGCCCACGGcc  >  2:3128811/1‑99 (MQ=12)
                                                                                                    ||||||||||                  
GTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGA............................  <  NC_014034/222148‑222049
..............................................................................................................CCGACCGATCCCACGGAT  <  NC_014034/222119‑222102

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG