New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1103358 =342 (0.760)96 (0.210) 21/196 28.1 0.30 intergenic (‑358/+60) ugpB/regA2 sn‑glycerol‑3‑phosphate‑binding periplasmic protein ugpB/photosynthetic apparatus regulatory protein RegA
?NC_014034 1253897 = 102 (0.220)intergenic (+55/+36) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
Rejected: Position hash score below cutoff.

GCGGGCGAAGACCTGGGCGGCATGATCGATTTCGAGGACTGATCCCCGGCCCCCGTTTTTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGC.GGAGCCCCCG.....................................................................................................  <  NC_014034/1103459‑1103358
.....................................................................................................CG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCGGG  >  NC_014034/1253897‑1253996
                                                                                                                                                                                                            
                                                                   ctAAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGAT                                    >  1:8570345/3‑101 (MQ=32)
                                                                   ctAAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGAT                                    >  2:2702161/3‑101 (MQ=32)
                                                                     AAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGA                                  >  1:3327355/1‑101 (MQ=32)
                                                                     AAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGA                                  >  2:3332117/1‑101 (MQ=32)
                                                                     AAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGA                                  >  2:5520436/1‑101 (MQ=32)
                                                                     AAATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGA                                  >  2:6339656/1‑101 (MQ=32)
                                                                      AATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGAT                                 >  2:1481405/1‑101 (MQ=32)
                                                                      AATACCTCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGAT                                 >  2:2065810/1‑101 (MQ=32)
                                                                       atacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATC                                >  1:1931978/7‑101 (MQ=32)
                                                                       atacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATC                                >  2:6667438/7‑101 (MQ=32)
                                                                        tacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCCGTTCAGGAAATTCGAGATGATCC                               >  2:6553968/6‑101 (MQ=17)
                                                                        tacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCC                               >  1:112592/6‑101 (MQ=32)
                                                                        tacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCC                               >  2:8258512/6‑101 (MQ=32)
                                                                        tacctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCC                               >  2:4411969/6‑101 (MQ=32)
                                                                         acctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCG                              >  1:3083312/5‑101 (MQ=32)
                                                                         acctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCG                              >  2:2238237/5‑101 (MQ=32)
                                                                         acctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCG                              >  1:9036079/5‑101 (MQ=32)
                                                                           ctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCA                            >  2:7387165/3‑101 (MQ=33)
                                                                           ctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCA                            >  1:2269673/3‑101 (MQ=33)
                                                                           ctCGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGAGGATCCGCA                            >  2:2437554/3‑101 (MQ=18)
                                                                           ctCGGAGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCA                            >  1:6031374/3‑101 (MQ=18)
                                                                             cggggggggGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGC                          <  2:2447419/92‑1 (MQ=12)
                                                                             CGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGC                          >  2:9083840/1‑101 (MQ=32)
                                                                             CGGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGC                          >  1:454361/1‑101 (MQ=32)
                                                                              ggggggggGGGGGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCC                         <  1:8468964/93‑1 (MQ=9)
                                                                              GGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCC                         >  1:6102354/1‑101 (MQ=32)
                                                                              GGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCC                         >  1:8775277/1‑101 (MQ=32)
                                                                              GGGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCC                         >  2:1461199/1‑101 (MQ=32)
                                                                              GGGGGGGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCC                         <  2:5244745/101‑1 (MQ=17)
                                                                               gggggggGGGGGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCC                        <  1:6503981/94‑1 (MQ=2)
                                                                               GGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCC                        >  2:3092275/1‑101 (MQ=32)
                                                                               GGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCC                        >  1:8592566/1‑101 (MQ=32)
                                                                               GGGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCC                        >  2:3206749/1‑101 (MQ=32)
                                                                               GGGGTGCGGGGGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCC                        <  1:1540521/101‑1 (MQ=17)
                                                                                ggggggGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCG                       <  2:8754487/95‑1 (MQ=0)
                                                                                GGGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCG                       >  1:5883511/1‑101 (MQ=32)
                                                                                 GGTGCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGG                      >  1:779195/1‑101 (MQ=32)
                                                                                  gtggGGGGGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGT                     <  2:1418089/97‑1 (MQ=2)
                                                                                  gtgCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGg                     >  2:400752/4‑100 (MQ=17)
                                                                                  gtgCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGT                     >  1:3938966/4‑101 (MQ=32)
                                                                                   tccgatctC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTG                    <  2:5968435/93‑1 (MQ=0)
                                                                                   gggGGGGGC.GGCCCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTG                    <  1:1088963/98‑1 (MQ=2)
                                                                                    ggGGGGGG.GGACCCCCGG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGC                   <  1:1471743/99‑1 (MQ=0)
                                                                                    ggGGGGGG.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGC                   <  2:7699191/99‑1 (MQ=0)
                                                                                    ggGGGGGC.GGCCCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGC                   <  2:1815223/99‑1 (MQ=2)
                                                                                    gCGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGC                   >  1:6582211/2‑101 (MQ=11)
                                                                                    gCGGGGGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGC                   <  2:3658425/100‑1 (MQ=11)
                                                                                     CGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCG                  >  1:8556298/1‑101 (MQ=1)
                                                                                     CGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCG                  >  2:2499002/1‑101 (MQ=1)
                                                                                     CGGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCG                  >  1:3149522/1‑101 (MQ=1)
                                                                                      GGGGGCGGGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCG                  <  2:8283417/101‑1 (MQ=0)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  2:5925086/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  2:3660782/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  2:8165954/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  1:2750882/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  1:8249661/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  1:6122192/1‑101 (MQ=1)
                                                                                      GGGGGC.GGAGCCCCCG.CCGGGACGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGC                 >  1:9189978/1‑101 (MQ=1)
                                                                                       GGGGC.GGCCCCCCCC.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCT                <  2:7607535/101‑1 (MQ=0)
                                                                                       GGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCT                <  2:7626893/101‑1 (MQ=1)
                                                                                       GGGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCT                >  2:5197046/1‑101 (MQ=1)
                                                                                        GGGG.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTG               <  1:5956682/101‑1 (MQ=0)
                                                                                        GGGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTG               >  1:2103702/1‑101 (MQ=1)
                                                                                         GGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGC              >  2:1070970/1‑101 (MQ=1)
                                                                                         GGC.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGC              >  2:5675098/1‑101 (MQ=1)
                                                                                         GGC.GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGC              <  2:8736253/101‑1 (MQ=1)
                                                                                           cgcgccCCCCGG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCG             <  2:3327251/95‑1 (MQ=0)
                                                                                           C.GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGagatcgga            >  1:5968670/1‑93 (MQ=0)
                                                                                             ggccCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           <  1:9083315/97‑1 (MQ=1)
                                                                                             gcccCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           <  2:137421/97‑1 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           >  1:6252050/1‑101 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           >  2:8340626/1‑101 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           >  2:555277/1‑101 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           >  2:4784073/1‑101 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           >  1:2593928/1‑101 (MQ=1)
                                                                                             GGAGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCACTGCGAT           >  1:7077297/1‑101 (MQ=1)
                                                                                             GGACCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAT           <  2:3454441/101‑1 (MQ=1)
                                                                                              ggcCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATT          <  1:8770299/98‑1 (MQ=1)
                                                                                              gcGCCCCAG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATT          <  2:1235628/99‑1 (MQ=1)
                                                                                              cccCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATT          <  2:6031137/98‑1 (MQ=1)
                                                                                               gcCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         <  2:6545792/99‑1 (MQ=1)
                                                                                               gGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         <  2:4986313/100‑1 (MQ=1)
                                                                                               ccCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         <  2:475652/99‑1 (MQ=1)
                                                                                               ccCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         <  1:2702243/99‑1 (MQ=1)
                                                                                               catgCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         >  2:4331217/5‑101 (MQ=1)
                                                                                               AGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         <  2:4816373/101‑1 (MQ=1)
                                                                                               AGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         >  2:7903739/1‑101 (MQ=1)
                                                                                               AGCCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTT         >  2:7017969/1‑101 (MQ=1)
                                                                                                cCCCCGG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTC        <  2:280372/100‑1 (MQ=1)
                                                                                                 CCCCCGCCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTC        <  1:1877496/101‑1 (MQ=11)
                                                                                                 CCCCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCT       <  2:6121955/101‑1 (MQ=1)
                                                                                                  CCCCG.CCGGGTCGCCGCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTC      <  2:8341546/101‑1 (MQ=1)
                                                                                                   CCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCC     <  1:142184/101‑1 (MQ=1)
                                                                                                   CCCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCC     >  2:5707086/1‑101 (MQ=1)
                                                                                                    CCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCG    <  2:3856785/101‑1 (MQ=1)
                                                                                                    CCG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCG    <  1:6296051/101‑1 (MQ=1)
                                                                                                                                                                                                            
GCGGGCGAAGACCTGGGCGGCATGATCGATTTCGAGGACTGATCCCCGGCCCCCGTTTTTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGC.GGAGCCCCCG.....................................................................................................  <  NC_014034/1103459‑1103358
.....................................................................................................CG.CCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCGGG  >  NC_014034/1253897‑1253996

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG