| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 1193628 | 15 (0.050) | 30 (0.100) | 5/136 | 32.4 | 0.33 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
| ? | NC_014034 | = 2474931 | 109 (0.240) | intergenic (‑94/+32) | RCAP_rcc02301/engA | hypothetical protein/GTP‑binding protein EngA | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
ACCGATCTGGTCGAGGCGCTGAAGAAAGCGGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC.................................................................................................... > NC_014034/1193500‑1193628
....................................................................................................TCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTGCGCCCCCCCGCACCCCCCGCCTTGCGTATTTGGCCAAGGAAAAGCCGGGCCGTTCGGGTGGGGGGGGCCGCGGTTTCCTGTCACCTTGGGG < NC_014034/2474931‑2474832
GGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCG < 1:7084062/101‑1 (MQ=1)
TCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGG < 2:7911564/101‑1 (MQ=1)
gGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATTTTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGG < 2:6054162/100‑1 (MQ=1)
GAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGG < 1:1402744/101‑1 (MQ=1)
GAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGCCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGG < 2:8816646/101‑1 (MQ=1)
AGCCGGTTTCAAAAGATCGCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGC < 2:5203268/101‑1 (MQ=1)
GCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCT < 2:4897209/101‑1 (MQ=1)
GCCGGTTCCAAAAGATCACGGAGAAGGGGCCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCT < 2:5932513/101‑1 (MQ=0)
CGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTcc < 1:4749382/101‑3 (MQ=31)
CGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTcc < 1:5054237/101‑3 (MQ=31)
CGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTcc < 2:3935460/101‑3 (MQ=31)
GGTTTCAAAAGATCACGGGGCAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGacaccg < 1:8836301/101‑7 (MQ=0)
GGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG < 2:5836651/101‑1 (MQ=32)
GTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGGTCCGC > 1:4300170/1‑101 (MQ=17)
GTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGC < 1:7434844/101‑1 (MQ=32)
TTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCC < 1:4877857/101‑1 (MQ=32)
TTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCC < 2:1418558/101‑1 (MQ=32)
TTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCC < 2:2783940/101‑1 (MQ=32)
TTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCCCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCC < 1:5102858/101‑1 (MQ=17)
CAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGNCCGAGGCGACCCGCGAGGGGGTGAGCCCCC > 1:2152400/1‑101 (MQ=255)
CAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCC < 1:7450123/101‑1 (MQ=32)
CAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCC < 1:3028652/101‑1 (MQ=32)
AAAGATCAGGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCg < 1:5548842/101‑2 (MQ=17)
AAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCg < 1:8473186/101‑2 (MQ=32)
AAGATCAGGGGGAAGGGGCCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCgc < 1:826944/101‑3 (MQ=12)
AAGATCACGGGGAAGGGGGCTTCGCCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCgc < 1:2008456/101‑3 (MQ=17)
ATCGCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACC < 2:8163754/101‑1 (MQ=17)
ATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACC < 1:158411/101‑1 (MQ=32)
cgCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACCCC < 2:868819/99‑1 (MQ=17)
cCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACCCCC < 2:6444075/100‑1 (MQ=17)
cCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACCCCC < 2:6471612/100‑1 (MQ=17)
ACGGGGAGGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCG.CCCCCCGCACCCCC < 1:1825110/101‑1 (MQ=17)
ACCGATCTGGTCGAGGCGCTGAAGAAAGCGGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC.................................................................................................... > NC_014034/1193500‑1193628
....................................................................................................TCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTGCGCCCCCCCGCACCCCCCGCCTTGCGTATTTGGCCAAGGAAAAGCCGGGCCGTTCGGGTGGGGGGGGCCGCGGTTTCCTGTCACCTTGGGG < NC_014034/2474931‑2474832
Base quality scores:
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 37 ≤
ATCG
|