BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1699960	91 (0.220)	38 (0.090)	10/182	33.4	0.28	intergenic (+33/+10)	RCAP_rcc01568/purF	RES domain family protein/amidophosphoribosyltransferase
*	?	NC_014034	1965264 =	107 (0.230)	38 (0.090)	10/182	33.4	0.28	intergenic (+32/+60)	bdhA/RCAP_rcc01818	3‑hydroxybutyrate dehydrogenase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 144 total aligned reads displayed.


TGTGCCGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTGCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GCGGG.CT.CC.G.CCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGC  >  NC_014034/1965164‑1965363


tcgtccGAGGAGGCCGCTCAGTGCACCCGCACGTCGATTTCTCTGTGTGGCGGCTGCACGGCACTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Ac                                                                                                            <  2:8922581/97‑1 (MQ=255)


 gttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Acc                                                                                                           <  2:1210549/98‑1 (MQ=255)


 gttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Acc                                                                                                           >  2:5611102/4‑101 (MQ=255)


  ttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Accc                                                                                                          >  2:2153834/3‑101 (MQ=255)


  ttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Accc                                                                                                          >  1:9054725/3‑101 (MQ=255)


  ttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Accc                                                                                                          >  1:7853286/3‑101 (MQ=255)


  ttccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.Accc                                                                                                          >  1:3947118/3‑101 (MQ=255)


   tccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGCCGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACccg                                                                                                         >  1:7447776/2‑101 (MQ=255)


   tccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCTCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACccg                                                                                                         <  2:4299394/100‑1 (MQ=255)


    ccGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACccg.c                                                                                                       <  1:3681794/101‑1 (MQ=255)


     cGAGGCGGCGGCGCAGATCACCGGCACTACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGCGATTTCTCCCC.GGGCCAACCCC.GAGC.CG.ACccg.cc                                                                                                      >  2:2265359/1‑101 (MQ=255)


      gAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACccg.cc..g                                                                                                   >  2:8485564/1‑101 (MQ=255)


      gAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.CGGGGAAGCCC.GAGG.CG.ACtcg.tc..g                                                                                                   >  2:823105/1‑101 (MQ=255)


       aGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GCGG.CG.ACccg.cc..gg                                                                                                  >  2:2145851/1‑100 (MQ=255)


           ggcggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACccg.cccggggg                                                                                                >  2:6017450/1‑95 (MQ=255)


           ggcggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGgggg                                                                                              >  1:5496589/1‑100 (MQ=255)


           ggcggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.c                                                                                             >  2:1120463/1‑101 (MQ=255)


             cggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GGGG.CG.ACCCG.CC..CGGGG.CT.c                                                                                          >  2:1114634/1‑101 (MQ=39)


              ggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGgggggcc                                                                                           >  1:8620595/1‑97 (MQ=255)


              ggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGgggggcc                                                                                           >  2:1965779/1‑97 (MQ=255)


                cgcAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CG.CC.G.c                                                                                     >  1:7583846/1‑101 (MQ=255)


                  cAGGTCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CG.CC.C.ccc                                                                                   >  1:7229250/1‑101 (MQ=38)


                  cAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG..C..GCggggggccgccc                                                                                      >  2:2114038/1‑92 (MQ=37)


                   aGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.G.cccc                                                                                  >  2:3442388/1‑101 (MQ=255)


                    gATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGggggggccccccc                                                                                     >  1:3620908/1‑91 (MQ=38)


                    gATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.G.ccccc                                                                                 >  2:7459174/1‑100 (MQ=255)


                       cACCGGCACGACGATGTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GC.CC.G.ccccccgc                                                                              >  1:7239045/1‑97 (MQ=25)


                         ccGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GC.CC.G.ccccccggcc                                                                            >  1:8240335/1‑95 (MQ=37)


                          cGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGAccc                                                                            >  2:5941075/1‑101 (MQ=37)


                            gCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GG.CC.C.ccccccggccccc                                                                         >  2:6821550/1‑92 (MQ=25)


                             cACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GC.CC.G.ccccccccgcaccc                                                                        >  2:3264099/1‑91 (MQ=25)


                                gacgaTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..CGGGG.GT.CC.GCCCCCGGACCCCCGAgg                                                                      >  2:5963352/1‑101 (MQ=37)


                                    aTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCGCCC..GGGGG.CC.CC.C.CCCCCGGccccccgggggat                                                                  >  1:6586114/1‑93 (MQ=25)


                                    aTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..CGGGG.CT.CC.GCCCCCCGACCCCCGAGGGAtt                                                                  >  1:2802488/1‑101 (MQ=25)


                                       tCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCCGGCCCCCCAGGGATTTCa                                                               >  2:3288021/1‑101 (MQ=21)


                                         tgtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGCGGGATTTCAgg                                                             >  2:1662911/1‑101 (MQ=25)


                                         tgggggtGGCGGCGGGCCGGCGCTGGGAGACTTCCCCCCGG.GGGGCACGCCG.GGGC.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAgg                                                             <  1:2897386/95‑1 (MQ=2)


                                          gtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CCCGGGGGG.CC.CC.C.CCCCGGCCCCCCCAggacttctcgg                                                             >  1:5870839/1‑92 (MQ=21)


                                          gtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GTCCC.C.CCCCCGGCCCCCCAGGGGTTTCAGGc                                                            >  1:5802370/1‑101 (MQ=21)


                                          gtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CTCCC.C.CCCCCGACCCCCGCGGGATTTCCGGc                                                            >  1:2249429/1‑101 (MQ=21)


                                           tgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCGGACCCCCCGGGGATTTCAGGCa                                                           >  2:5636575/1‑101 (MQ=21)


                                             gggggcggcGGGCGGGCGTGGTGAGGGTTTCCGCCGG.GGGGCACCCCC.GGGC.CC.CCCCG.CC..GGGGG.CT.CT.GCCCCCGGACCCCCGAGGTATTTCAGGCAAg                                                         <  1:6107488/98‑1 (MQ=2)


                                             gATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCGGGCCCCCGAGGGATTTCAGGCAAg                                                         >  2:7276820/1‑101 (MQ=25)


                                              gggggggcGGGGCGGGGCTGGGGGAGCTTCCGCCGG.GGGGCACGCCG.GGGG.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGa                                                        <  2:5642761/96‑1 (MQ=9)


                                              ggggcggcGGGGCGGCGCTGTGAAAGTTTCCCCCGC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGa                                                        <  1:473817/99‑1 (MQ=18)


                                              aTGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGGCCCCCCGGGGATTTCCgggcagg                                                        >  2:5237564/1‑96 (MQ=18)


                                               tGGCGGCTGGACGGCGCTGTGAGAGATATCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CCGG.CCCCCGCCCCCCGCGGGAtttgcagccagaa                                                       >  2:2112683/1‑91 (MQ=16)


                                               gggcgggGGGCCGGCGCGGGGAGAG.TTGCCCCCG.GGGGCCAGCCC.GGGGCCC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGAt                                                       <  1:2577204/100‑1 (MQ=2)


                                                ggcggcTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGGCAGATg                                                      >  2:6675437/1‑101 (MQ=25)


                                                ggcggcGGGGGGGCGGGGTGAGAGTTCCCGCCGG.GGGCCAGCCCC.GAGG.CG.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATg                                                      <  2:7690983/101‑1 (MQ=2)


                                                  gggggggggggCGGTGTGAGAGCTTCGGCCGG.GGGGCAGGCCG.GGGG.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGaa                                                    <  2:2964024/92‑1 (MQ=9)


                                                   ggcTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGaaa                                                   >  1:1299692/1‑101 (MQ=21)


                                                    gggggcgggCGGTGGGAGAGTTTCCGCCGG.GGGCCAACCCG.GGGC.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAag                                                  <  2:4718566/94‑1 (MQ=2)


                                                    gcgggccGGCGCTGTGAGAGATCCCGCCTC.GGGGCACGCCC.GGGC.CC.CCCCG.CC..GGGTG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAag                                                  <  2:3196919/95‑1 (MQ=16)


                                                    gcTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGGCCC.CC.C.CCCCCGGCCCCCCCGGGATTTTCGGCAAGATGaaaa                                                  >  1:621864/1‑100 (MQ=12)


                                                      tGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAagag                                                >  2:5093515/1‑101 (MQ=21)


                                                        gggggCGGTGTGAGAG.TTCCCCCGCGGGGGCACCCCC.GAGC.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAggg                                              <  2:3614019/98‑1 (MQ=9)


                                                            gatcTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GTCCC.C.CCCCCGACCCCCGAGGGATTTCAGGCCAGATTGAAGAGGGgggc                                          >  1:8543887/4‑101 (MQ=16)


                                                              gcTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGGGCTc                                        >  2:4152718/1‑101 (MQ=21)


                                                                tgtgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCGCCC..GGGGG.CC.CC.C.CCCCCGGCCCCCCCGGGGTTTTAAGGGAGAAGGAAGAGGGGGGCTCAg                                      >  1:5986250/1‑101 (MQ=9)


                                                                 gtgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCGGGCCCCCCAGGGATTTTAGGCAAGATGAAAGAggggggggcagg                                     >  2:7787975/1‑93 (MQ=18)


                                                                 gtgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAgg                                     >  2:8829520/1‑101 (MQ=21)


                                                                  tgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGCGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAggg                                    >  2:8295888/1‑100 (MQ=21)


                                                                  tgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCCggg                                    >  2:5277745/1‑100 (MQ=21)


                                                                   gagagaTTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCGGGCCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCCGAggcg                                   >  2:3666811/1‑101 (MQ=21)


                                                                    agagaTTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GG.CC.GCCCCCCGCCCCCCGAGGAATTTCAGGCAAGATGAAAGAGGGGCGGGCAggggg                                  >  2:115514/1‑101 (MQ=18)


                                                                       gaTTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GTCCC.C.CCCCGGGCCCCCCCGGGATTTCTGGCAAGATGGAAGAGGGGGGCGCAGGGGGCct                               >  1:8755106/1‑101 (MQ=12)


                                                                        aTTTCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCCGGCCCCCCAGGGCTTTCGGGCAAGATGAAAAAGGGGGGCTCAGGCGGcccc                              >  1:8385315/1‑99 (MQ=16)


                                                                         tctccgcgc.GGGGCAACCCCGGCGG.CC.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCctt                              <  2:8669000/93‑1 (MQ=18)


                                                                           tcgcgcggggggCCGGCCC.GGGG.CGCCCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCcttc                             <  2:5476407/93‑1 (MQ=18)


                                                                           tcgcCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCCGACCCCCCAGGCATTTCCGGCAAGATGAAAAAGGGGCGCGCAGGCGGCcttctt                           >  1:4035364/2‑101 (MQ=21)


                                                                             gcCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGACGGATTTCCGGCAAGAAGAAAGAGGGGCGCTCAGGCGGGCTTCTTcg                         >  1:8972582/1‑101 (MQ=21)


                                                                              gccc.GGGGCACCCCCGGACG.CC.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTcg                         <  1:5419641/98‑1 (MQ=18)


                                                                              ccgc.GGGGCCACCCCGGAGC.CG.CCCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTcg                         <  2:8094216/98‑1 (MQ=18)


                                                                                 c.GGGGCAAGCCC.GAGG.CG.ACCCG.CCG.GGGGG.CC.CC.C.CCCCCGGCCCCCCCGGGATTTTAGGGCAGAAGAAAAAAGGGGGCGCCGGGGGGCCTCCTcgcccc                     >  2:558092/1‑99 (MQ=2)


                                                                                 c.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.GT.CC.GCCCCCCGACCCCCCAGGGATTTCCGGCAAGATGGAAGAGGGGGGCTCAGGCGGCCTTTCTcgccgc                     >  2:8142677/1‑101 (MQ=21)


                                                                                 c.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGGGCTCAGGCGGCCTTCTTcgccgc                     >  2:9003112/1‑101 (MQ=21)


                                                                                 c.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCCGGCCCCCCCGGGATTTCAGGCCAGATGAAAGAGGGGCGCTCAGGCGGCCCTCTTcgccgc                     >  1:1493935/1‑101 (MQ=21)


                                                                                   ggggCAAGCCC.GAGG.CG.ACCCG.CCG.GGGGG.GC.CC.C.CCCCCGACCCCCCCGGGATTTCAGGCAAAAAGAAAAAAGGGCGCTTCGGCGGCCTTCTTCgccccc                    >  2:2724938/1‑101 (MQ=12)


                                                                                    gggCAAGCCC.GAGG.CG.ACCCG.CC..GGGGG.CTCCC.C.CCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCgccgccc                   >  2:8235987/1‑100 (MQ=25)


                                                                                        aaGCCC.GAGG.CG.ACCCG.CC..GGGGG.CTCCC.C.CCCCCGGCCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCCGGCGGCCTTCTTCGCCGCCCTGcc               >  2:8364642/1‑101 (MQ=21)


                                                                                        aaGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCCTCTTCGCCGCCTTGcc               >  2:1371645/1‑101 (MQ=21)


                                                                                        aaGCCC.GAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCCGAGCCCCCCGGTATTTCAGGCAAGATGAAAGAGGGGCGGGCGGGCGGGCTTCCTCcccccccgtcc               >  2:2834626/1‑96 (MQ=9)


                                                                                           ccc.GAGG.CG.ACCCG.CC..GGGGG.CTCCC.C.CCCCCGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCCTGccccg            >  2:7044733/1‑99 (MQ=21)


                                                                                              ccggggcccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCgg            <  1:2298031/91‑1 (MQ=25)


                                                                                               gAGG.CG.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgtgt         >  2:7238006/1‑101 (MQ=25)


                                                                                               cggggcccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgt           <  2:1627820/92‑1 (MQ=25)


                                                                                               ccggccccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgt           <  1:1943294/92‑1 (MQ=25)


                                                                                                  gggccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtc        <  2:4123805/95‑1 (MQ=25)


                                                                                                   gccgccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtct       <  2:8972161/96‑1 (MQ=25)


                                                                                                   ccccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtct       <  2:1995825/96‑1 (MQ=25)


                                                                                                    cccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc      <  1:131192/97‑1 (MQ=25)


                                                                                                    cccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc      <  1:7277124/97‑1 (MQ=25)


                                                                                                    cccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc      <  1:5277929/97‑1 (MQ=25)


                                                                                                    cccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc      <  1:5406111/97‑1 (MQ=25)


                                                                                                     g.ACCCG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGGGCTCAGGCGGCCTTCTTTCCCGCCTTGCCCGGGGTCTCgg    >  2:5398435/1‑101 (MQ=21)


                                                                                                     ccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCg     <  2:8221958/98‑1 (MQ=37)


                                                                                                     ccccccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCg     <  2:7107790/98‑1 (MQ=37)


                                                                                                      cccccG.CC..GGGGG.CT.TC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCgg    <  1:8000229/99‑1 (MQ=37)


                                                                                                        cccG.CC..GGGGG.CT.CC.GCCCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGc  <  1:1662958/101‑1 (MQ=255)


TGTGCCGAGGCGGCGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTGCGCCTC.GGGGCAAGCCC.GAGG.CG.ACCCG.CC..GCGGG.CT.CC.G.CCCCGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGC  >  NC_014034/1965164‑1965363

Base quality scores:


ATCG

< 3 ≤


ATCG

< 14 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG