New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2330179 =144 (0.330)69 (0.160) 17/190 29.7 0.23 intergenic (+154/+158) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
?NC_014034 3276378 = 325 (0.710)intergenic (‑130/+119) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 343 total aligned reads displayed.

TAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGCG.AAGGGACGC  >  NC_014034/3276278‑3276477
                                                                                                      |                                                                                                       
tAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCggggg                                                                                                         >  2:24581/1‑101 (MQ=255)
 agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGc                                                                                                        >  1:6708493/1‑101 (MQ=255)
 agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGc                                                                                                        >  2:8756255/1‑101 (MQ=255)
 agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGc                                                                                                        <  1:7122283/101‑1 (MQ=255)
  gcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCg                                                                                                       <  1:4053621/101‑1 (MQ=255)
   cagcCTGCACGACGGGGGCACGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGCCgg                                                                                                      <  1:7220283/101‑1 (MQ=255)
   cagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCgg                                                                                                      <  2:8461213/101‑1 (MQ=255)
    agcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGa                                                                                                     <  1:1381439/101‑1 (MQ=255)
     gcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAg                                                                                                    <  1:8559778/101‑1 (MQ=255)
       cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGcc                                                                                                  >  1:7895184/1‑101 (MQ=255)
       cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGcc                                                                                                  >  2:7953138/1‑101 (MQ=255)
        tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGccc                                                                                                 <  2:1427175/101‑1 (MQ=255)
         gCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGcccc                                                                                                <  1:2389788/101‑1 (MQ=255)
         gCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGcccc                                                                                                >  1:624539/1‑101 (MQ=255)
          cACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGccccc                                                                                               <  2:8393441/101‑1 (MQ=255)
          cACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGccccc                                                                                               <  1:7427293/101‑1 (MQ=255)
               cgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCc.ggcgg                                                                                         >  1:3859426/1‑101 (MQ=255)
                gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCggg                                                                                        >  1:2259655/1‑101 (MQ=255)
                  gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATCCGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTc                                                                                      <  2:3641647/101‑1 (MQ=255)
                  gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGTCGGGGGTCCGGGGGCGGAGCCCCC.GGCggggg                                                                                      >  2:6774107/1‑99 (MQ=255)
                  gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTc                                                                                      <  2:7503588/101‑1 (MQ=255)
                    gcagggggcaaGGCGCCGC.AGGCCCCCCGGGCCACCCGGCCCCCG.TTTCTTCTGGGCCCAAATCCGCGGGGGGCCGGGGGGCGGACCCCCC.GGCGGGTcgc                                                                                    <  2:5244714/101‑1 (MQ=19)
                     caaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCgggggggc                                                                                   >  2:1458181/1‑96 (MQ=255)
                      aaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCggggggggc                                                                                  >  1:1242764/1‑95 (MQ=255)
                      aaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGcgccg                                                                                  >  2:9123246/1‑101 (MQ=255)
                        ggggcaaAGCGGGAAACGGCCTCCGGGG.AAACCGAGCCCCG.TTTCGTCTCGGCCCAAATGCGCGGCGGGTCCGGGGGCGGAGCCCCC.GGCGGCTCgccgcg                                                                                <  2:7122100/101‑1 (MQ=9)
                         gggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGggcgcgc                                                                               >  1:1500638/1‑101 (MQ=255)
                         gggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCgccgcgc                                                                               >  2:3334918/1‑101 (MQ=255)
                           gaaaTGCGGCGCAAGGCCCCCGGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCgccgcgcgg                                                                             <  2:3768733/99‑1 (MQ=255)
                            caaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCGCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGggccggcgggc                                                                            >  1:4777071/1‑95 (MQ=21)
                            caaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCgccccgccgg                                                                            >  2:1985332/1‑98 (MQ=255)
                             aaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCgccgcgcggcc                                                                           <  2:2153334/101‑1 (MQ=255)
                             aaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGggcgcgcgggc                                                                           >  1:6096199/1‑99 (MQ=255)
                                 cgggccagggCCCCCCGGG.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCgccgcgcggccgcgc                                                                       <  2:3620414/93‑1 (MQ=255)
                                 cggcgCAGGGCCCCCGGGG.CAACCGGCCCCCT.TTTCTTCTTGGCCCAAATCCGCCGGGGCTCGGGGGGCGGAGCCCCC.GGCGGGTCgccgcgcggccgcgc                                                                       <  2:5395234/101‑1 (MQ=17)
                                     gcAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGCCGCGCGGCGCCgccgcg                                                                   >  2:3721215/1‑101 (MQ=18)
                                      cAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGgcgcgcggccgcgcggggc                                                                  >  2:2521766/1‑98 (MQ=18)
                                       aaGCCCCCCGGGG.CACCCGCCCCCCG.TTTCTTCTTGGCCAAAAGCCGCCGGGGGGCGGGGGGGGGACCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGaa                                                                 <  1:3448535/101‑1 (MQ=14)
                                        aGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGGCCCGCCGGCGCgccgcgggc                                                                >  2:3271982/1‑98 (MQ=17)
                                          gCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGACCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.a                                                             <  2:6483851/101‑1 (MQ=255)
                                          gCCCCCCGGC.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.a                                                             <  2:4752247/101‑1 (MQ=255)
                                           ccccccGGG.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.aa                                                            <  1:5344208/101‑1 (MQ=255)
                                             ccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCCGCGGGAC.aaaa                                                          >  2:6389142/1‑100 (MQ=17)
                                               ccGGC.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATCCGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGga                                                        <  2:2657934/101‑1 (MQ=255)
                                                cGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGCCGCGGCGCCCGGCGGCGGAAC.acaaggc                                                       >  2:2791782/1‑95 (MQ=17)
                                                 ggg.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.c                                                     <  1:5549597/101‑1 (MQ=255)
                                                 ggg.CACCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.c                                                     <  1:3636285/101‑1 (MQ=255)
                                                  gg.CACCCGG.CCCCG.TTTTCTCCTGGCCCAAAATCGGCGGGGGGCCGGGGGGGGGCCCCCCGGGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.cg                                                    <  1:8008712/101‑1 (MQ=9)
                                                  gg.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGTTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.cg                                                    <  2:5969120/101‑1 (MQ=255)
                                                   g.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAgac.cga                                                   >  1:6864628/1‑101 (MQ=255)
                                                   g.CAACCGCCCCGCG.TTTTTTCTGGGCCCAAATACGCCGGGGGTCGGGGGGGGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.cga                                                   <  1:513826/101‑1 (MQ=14)
                                                      cccccccccccGTTTTTTTCTCGCCCCAAAGCCGCGGGGGGCCGGGGGGCGGACCCCCG.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGgac.cgac                                                  <  1:4579668/95‑1 (MQ=9)
                                                      acccGGCCCCCG.TTTCTTCTTGGCCCAAATCCGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGTCGCGCGGCCGCGCGGCGAAAC.AAAGgac.cgacc                                                 <  1:6462936/99‑1 (MQ=255)
                                                      aaCCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCCGCCCCGGGGCGGGAC.AAAGgac.cgcac                                                 >  2:1292665/1‑98 (MQ=17)
                                                       cccGGCCCGTG.TTTCTTCGTGCCAGAACGCCGCGGGGGGGGGGGGGGGGGGCCCCCG.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGac.cgaccg                                                <  2:3033379/100‑1 (MQ=12)
                                                          ggCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGCGCGCGGCGGAAC.AAAAGAA.CGACCGGGc                                             >  2:4893621/1‑101 (MQ=17)
                                                          cgCCCCCGTTTTCTTCTGGCCCCAAATCCGCGGGGGGCCGGGGGGCGGGGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCggg                                              <  1:737168/100‑1 (MQ=17)
                                                             ccccG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGc                                          <  2:5680618/101‑1 (MQ=255)
                                                                 g.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGCCGCGCGGCCGCGCGGGGGAAC.AAAAGACAGGACCgggggcgccc                                       >  2:1144418/1‑94 (MQ=14)
                                                                   tttCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGACCCCGGCGACAC.AAAAGAC.CCACCGGGCCGcccccc                                     >  1:429377/1‑101 (MQ=17)
                                                                   tttCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCCCGGCCGCGCGGCGGAAA.AAAAGAA.CGACCCGGGAGcccccc                                     >  1:7603806/1‑101 (MQ=17)
                                                                    ttcttcTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGGCGCGCGGGCGCGCGGCGGGACAAAAGCAA.CCACCGGGCGCcccccc                                     >  2:3449240/1‑101 (MQ=9)
                                                                    ttcttcTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGCCGCGCGGCCGCGCGGGGGAAC.AAAAGAC.CGACCCGGCAGccccccc                                    >  2:8172607/1‑100 (MQ=18)
                                                                    ttcttcTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCCGCGCCGGGCCGCGGGAC.AAAAGAA.CGAACCGGCAGACCCCCg                                    >  1:2457883/1‑101 (MQ=9)
                                                                      cttcttGGCCCAAATGCGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGt                                  <  2:7377684/101‑1 (MQ=255)
                                                                      cttcttGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGCGCGCGGCGGAAC.AAAGGAC.CGGCCGGGCAGcccccccgc                                  >  1:1018564/1‑98 (MQ=18)
                                                                       ttcttGGCCCAAATACGCCGGGGGTCGGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTc                                 <  1:1985392/101‑1 (MQ=255)
                                                                       ttcttGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGCGCGCGGCGGGACAAAAGAAC.CCACGGGGCGCCCCCCCggc                                  >  1:7759/1‑100 (MQ=11)
                                                                        tcttGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCg                                <  2:2259588/101‑1 (MQ=255)
                                                                        tcttGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAGAC.CGACCCGGCCGcccccccggcg                                >  2:6867021/1‑96 (MQ=17)
                                                                         cttGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAGGAC.CCACCCGGGCGcccccccgcccg                               >  1:3289369/1‑95 (MQ=17)
                                                                           tGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGGGGAAA.AAAAGAG.CGACCCGGCGGaccccccgcccggc                             >  2:1828126/1‑93 (MQ=14)
                                                                            ggCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCa                            <  2:6625171/101‑1 (MQ=255)
                                                                            gccccAAATCCGCGGGGGGCCGGGGGGCGGCCCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCa                            <  1:8756660/99‑1 (MQ=21)
                                                                              cccAAATCCGCGGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGt                          <  1:1603056/101‑1 (MQ=255)
                                                                               ccAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACTGGGCAGCCCCCCGGTCGGCCAGTg                         <  2:6095962/101‑1 (MQ=255)
                                                                                   aTACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGGGCCGGGCGGGCGCGCGGCGGAAA.AAAGGAA.CGACCGGGGCGACCCCCCGGCGGCCCGTGCAcc                     >  2:8147619/1‑101 (MQ=12)
                                                                                   aTACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGCGCGCGGCGGAAC.AAAAGAC.CGACCGGGCAGCCCCCCCCGCGGCCCGTGAAcc                     >  2:8951058/1‑101 (MQ=18)
                                                                                   aTACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGGGGAAC.AAAGGAC.CGAACGGGCGGCCCCCCCGGCGGcccaggagcc                     >  2:162624/1‑93 (MQ=18)
                                                                                   aTACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGCAAC.AAAAGAC.CGCCCGGGCAGCCCCCCGGGCCGcccgcgagac                     >  1:5831651/1‑93 (MQ=18)
                                                                                    tgcGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAAccc                    <  2:7840751/99‑1 (MQ=255)
                                                                                      cGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGa                  <  2:5927342/101‑1 (MQ=255)
                                                                                       gCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGGCGCGCGGCCGCGCGGCGGAAA.AAAAGAC.CGACCGGGGCGCCCCCCGGGCGGGCCGGGGACCCGaa                 >  1:5940523/1‑101 (MQ=17)
                                                                                        cggggggCCGGGGGGCGGGGCCCCG.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGaaa                <  1:8172956/99‑1 (MQ=37)
                                                                                         cGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAA.AAAAGAC.CGACCGGGGCGCCCCCCCGGCGGGCCGGGAAcccccaaa               >  2:392406/1‑96 (MQ=12)
                                                                                         cGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCCCGCGGCCGCGCGGCGGAAC.AAAAGAA.CCACCCGGGAGGCCCCCCGCCGGCCCCGGGACCCGAAAc               >  1:4894953/1‑101 (MQ=9)
                                                                                          gggggTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAAcg              <  2:5806144/101‑1 (MQ=255)
                                                                                          gggggTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCCCGGGCGCCCGGCGGAAC.AAAAGAC.CGACCCGGCGGGCCCCCGGGCGGCCCGGGAACCCGCAAcg              >  1:2525151/1‑101 (MQ=16)
                                                                                            gggTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAGAC.CGACCGGGGAGCCCCCCCGCCGGCCAGGGAACCCCAAAcgcg            >  1:2849152/1‑101 (MQ=21)
                                                                                            gggTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAGAC.CGACCGGGCAGCCCCCCCGGCGGCCCGTGAACCCCAAAcgcg            >  1:9116982/1‑101 (MQ=25)
                                                                                             ggTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGGCGCGCGGCGGAAC.AAAGGAA.CGACCGGGGCGCCCCCCCGGCCGCCAGGGAAACCGACAcccgc           >  1:2907266/1‑100 (MQ=16)
                                                                                              gTCCGGGGGCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAGAA.CGACCGGGCAGCCCCCCCGGCGGCCCGGGAACCCGcaaaacgga          >  2:4081779/1‑95 (MQ=18)
                                                                                               gcggggggCGGCGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGCG.AAg        <  1:5716938/98‑1 (MQ=255)
                                                                                               gccGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGGACCCGAAACGCG.AAg        <  1:8853766/100‑1 (MQ=255)
                                                                                                ccGGGGGCGGAGCCCCC.GGCGGGGGGCCGCGCGGGCGCGCGGCGGAAC.AAAAGAC.CGACCGGGGAGCCCCCCCGGCGGCCCGGGAACCCGAAACGCG.ACgg       >  2:4380178/1‑101 (MQ=21)
                                                                                                 cGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGGCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGGCCCCCGGGCGGCCCGGGAAACCGGAACGCC.AAagg      >  2:9035176/1‑101 (MQ=21)
                                                                                                  gggggCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAGGAC.CGACCGGGCAGCCCCCCCGGCCGCCAGTGGAACCGAAACGCG.GAGGGa     >  2:3162272/1‑101 (MQ=25)
                                                                                                  gggggCGGAGCCCCC.GGCGGGGCGCCCCGCGGCCGCGCGGCGGAAC.AAAGGAC.CGACCGGGCCGCCCCCCGGCCGGCCCGCGGACCCGAAACGCGCAAggg      >  2:2087450/1‑101 (MQ=25)
                                                                                                  gggggCGGAGCCCCC.GGCGGGGCGCCCCGCGGCCGCGCGGCGAAAC.AAAAGAC.CGACCGGGGAGCCCCCCCGGCGGCCCGGGGACCCCACACCCG.AAgggg     >  2:1543160/1‑100 (MQ=18)
                                                                                                   ggggCGGAGCCCCC.GGCGGGGCGCCGCGCGGCCGCGCGGCGGAAC.AAAAGAC.CGACCGGGGAGGCCCCCCGGCGGCCCGCGCACCCGCAACCCG.GAGGGag    >  1:44481/1‑100 (MQ=16)
                                                                                                      |                                                                                                       
TAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.GGCGGGTCGCCGCGCGGCCGCGCGGCGAAAC.AAAGGAC.CGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAACGCG.AAGGGACGC  >  NC_014034/3276278‑3276477

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG