BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 390845	112 (0.270)	27 (0.070)	14/178	30.3	0.21	intergenic (‑161/+128)	mipZ/rpmE	chromosome partitioning protein MipZ/50S ribosomal protein L31
*	?	NC_014034	= 1732856	86 (0.190)	27 (0.070)	14/178	30.3	0.21	intergenic (‑280/‑123)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
Rejected: Position hash score below cutoff.

Only 100 of 146 total aligned reads displayed.


CCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC  >  NC_014034/1732756‑1732948


ccAGCCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGt                                                                                                              <  2:338694/101‑1 (MQ=255)


 cAGGCCCCCCTGCGGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTg                                                                                                             <  2:675286/101‑1 (MQ=255)


  cggCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGa                                                                                                            <  2:5535836/100‑1 (MQ=255)


  aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGa                                                                                                            <  1:1877050/101‑1 (MQ=255)


   ggCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGaa                                                                                                           <  2:3778180/101‑1 (MQ=255)


    gCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAg                                                                                                          <  1:1763985/101‑1 (MQ=255)


      cccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAATGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cc                                                                                                     <  1:9006183/101‑1 (MQ=255)


      cccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...cc                                                                                                     >  1:5251893/1‑101 (MQ=255)


       cggcTGCAGCCGGATGCCGCGCGGGTGAGCCGGCAAGGGCCCCGCTTTTCCTAGGTAAAATGCGCCCTTCTTTCTTATC.GGGGGGGGGGG.GGGTGAGG...ccc                                                                                                    <  2:9024881/98‑1 (MQ=255)


       ccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...ccc                                                                                                    <  1:6826622/101‑1 (MQ=255)


       ccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...ccc                                                                                                    <  1:8596676/101‑1 (MQ=255)


       ccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...ccc                                                                                                    >  1:3051790/1‑101 (MQ=255)


        cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccc                                                                                                   >  2:2347479/1‑101 (MQ=255)


        cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccc                                                                                                   <  2:5308468/101‑1 (MQ=255)


        cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccc                                                                                                   <  1:7396425/101‑1 (MQ=255)


        cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...gccc                                                                                                   >  2:5364835/1‑101 (MQ=255)


         ccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...ccccc                                                                                                  <  1:6927588/101‑1 (MQ=255)


          cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccccc                                                                                                 <  1:2406561/101‑1 (MQ=255)


          cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccccc                                                                                                 <  2:3895712/101‑1 (MQ=255)


          cTGCAGCCACATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...cccccc                                                                                                 <  2:7595793/101‑1 (MQ=255)


           tGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGCGGGGGAGG...cccccc                                                                                                 >  2:5402430/1‑101 (MQ=255)


            gCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...cccccccc                                                                                               >  2:2483603/1‑99 (MQ=255)


             cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...ccccccccc                                                                                              >  1:2617009/1‑98 (MQ=255)


              aGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgg                                                                                         >  2:3766251/1‑98 (MQ=255)


                 cGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtc                                                                                      <  1:5551296/101‑7 (MQ=255)


                  gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...gccccccccgggtg                                                                                         >  2:8799210/1‑93 (MQ=255)


                  gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...gccccccccgggcg                                                                                         >  1:244060/1‑93 (MQ=255)


                  gCATCCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtcg                                                                                     <  1:1064219/101‑8 (MQ=255)


                   cATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...gcccccccggggcgc                                                                                        >  1:3805046/1‑92 (MQ=255)


                    aTGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAG...ccccccccggggggcc                                                                                       >  1:5534488/1‑91 (MQ=255)


                    aTGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGAAG...gccccccccgggcgcc                                                                                       >  2:5961451/1‑91 (MQ=255)


                     tGCCGCCCGCGTCAACAGGCAAGGTCCCCGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtcgcct                                                                                  <  2:4000740/101‑11 (MQ=37)


                        cGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGAAG...CCCCCC....GC...C...GG.ccgcccccg                                                                        >  1:8193809/1‑94 (MQ=255)


                                gcAACAGGAGAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGccc                                                                   <  2:6776328/100‑1 (MQ=21)


                                   acgggCAGGGCCCCCGCTTTTCCTGGGCAAAATACGCCCTCCTTTCTTTTC.GGGGGGGCGGG.GGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAg                                                                <  2:571090/98‑1 (MQ=12)


                                      ggCAGGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTTTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g                                                            <  1:4492154/101‑1 (MQ=18)


                                      ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g                                                            <  2:8963130/101‑1 (MQ=21)


                                      ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g                                                            <  1:7822077/101‑1 (MQ=21)


                                      ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.g                                                            <  2:7740725/101‑1 (MQ=21)


                                      gccagggcccccGTTTTCCCTGGGCAAAATCCCCCCTTCTTTCTTTGG.GGGGGGGGGGG.GGGGAAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g                                                            <  2:4614877/93‑1 (MQ=2)


                                       gCAAGGGCCCCGCTTTTCCTAGGCAAACTACGCCCTTCTTTCTTTGC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga                                                           <  2:929356/101‑1 (MQ=18)


                                       gCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga                                                           <  1:921973/101‑1 (MQ=21)


                                          aGGGCCGCGCTGTCCCTAGTCAAACTTCGCCCTTCTTTCTTTGC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAg                                                        <  2:2887872/101‑1 (MQ=9)


                                           gggCCCGGTTTTTCCGGGGAAAAGTCCGCCCTTGTTTTTGTGG.GGGGGGGGGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGc                                                       <  1:6290766/101‑1 (MQ=2)


                                            gcccccGTTTTTCCTAGGCAAAATCCCCCCTTTTTTCTTTGG.GGGGGGGCGGG.GGGGGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCt                                                      <  1:67034/99‑1 (MQ=2)


                                              cacggCTTTTCCGGGCCAAAATGGGCTTTTGTTTCTTGCA.GGGGGGGGAGA.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.c                                                   <  1:1283412/97‑1 (MQ=2)


                                               cccGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTGTC.GGGGGGGGGGG.GGGTGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cc                                                  <  1:8173736/101‑1 (MQ=18)


                                                ccGCTTTCCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc                                                 <  2:8669873/101‑1 (MQ=18)


                                                 cGCTTTTCCTGGGCAAAATGCGCCCTTCTTTCTTTGC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccc                                                <  2:2508570/101‑1 (MQ=17)


                                                   cTTTCCCTAGGCAAAATCCCCCCTTTTTTCTTTTG.GGGGGGGCGGG.GGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccccc                                              <  1:5963820/101‑1 (MQ=9)


                                                    ttttCCTAGGCACAATTCGCCTTTCTTTCTTTGC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCg                                             <  2:4879547/101‑1 (MQ=17)


                                                      ttCCTAGGCAAAATGCGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg                                           <  2:4103966/101‑1 (MQ=18)


                                                      ttCCTAGGCAAAANCCGCCTNNNTTTNTTNNC.GGGGGGGCGGG.GGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg                                           <  1:3639305/101‑1 (MQ=17)


                                                      tcccTAGGCAAAATCCGCCCTTCTTTCTTTTG.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg                                           <  2:4534751/99‑1 (MQ=17)


                                                       tCCTAGGCAAAATCCGCCCTTTTTTCTTTTG.GGGGGGGGGGG.GGGTGAAC...CCCCCCGCG.GG...T...CG.CCTTGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa                                          <  1:4754998/101‑1 (MQ=12)


                                                       tCCTAGGAAAAATCCCCCTTTTTTTTTTTGG.GGGGGGGGGGG.GGGTGACC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa                                          <  1:3310579/101‑1 (MQ=2)


                                                           agtcAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc                                      <  2:9143811/98‑1 (MQ=18)


                                                           aGGCAAATTCCCCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc                                      <  1:1687178/101‑1 (MQ=17)


                                                            gacAAAAGTCGCCCTTCTTTCTTTGG.GGGGGGGCGGG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAcc                                     <  1:5693992/99‑1 (MQ=9)


                                                             gCAAGATGCCCCCTTCTTTTGTTAG.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt                                    <  2:7089179/101‑1 (MQ=9)


                                                             gCAAAAGACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt                                    <  1:7302494/101‑1 (MQ=18)


                                                             gCAAAAAGCCCCCTTTTTTTTTTTCGGGGGGGGGGGG.GGGTGACC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAcc                                     <  2:3051691/101‑1 (MQ=9)


                                                              cAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCtt                                   <  2:5169475/101‑1 (MQ=21)


                                                                 aatgcccccTTCTTTCTTTGC.GGGGGGGCGGG.GGGTGCAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc                                <  1:5402615/95‑1 (MQ=17)


                                                                 aaTCCGCCCTTCTTTCTTTGC.GGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc                                <  1:2629042/101‑1 (MQ=18)


                                                                    aCGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGGGGAGCCCCCCCCC....GG...G...CGCCCCCGGGCTTCCCCGGGGG.GAAGGCTT.CCCCCCGGGAAAACCtgccccc                              >  2:5253443/1‑95 (MQ=255)


                                                                      gtccTTCTTTCTTTTG.GGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgc                           <  2:8334277/99‑1 (MQ=18)


                                                                        ccTTCTTTCTTGGG.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgcgc                         <  1:9073136/101‑1 (MQ=17)


                                                                           tctttcttTTC.GGGGGGGCGGG.GGGGGAAG...CCCCCCCCGGGG...C...CG.CCCCGGGCTTGCCCCGGGG.GAAACCTT.CCCCCC.CGAAAAACCTGCCCgcgccccgc                      >  1:8914027/1‑96 (MQ=255)


                                                                           tctttcttTTC.GGGGGGGCGGG.GGGGGAAG...CCCCCCCCG.GG...G...GG.CCCCGGGGTTGCCCCCGGC.GGAAGCTTCCCCCCCGGGAAAACCTTGccgccccgccc                       >  2:907546/1‑92 (MQ=255)


                                                                            ctgtctttGC.GGGGGGGCGGG.GGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg                     <  2:4791002/98‑1 (MQ=18)


                                                                              ttctttTC.GGGGGGGCGGG.GGGGGGAGGCCCCCCCCG...GG...C...GG.CCCCGGGGTGGCCCCGGGG.GAACGCTC.CCCCCCCGGAAAACCTT.CCTTcgcgcggcccc                   >  1:6013366/1‑96 (MQ=255)


                                                                              ttctttTC.GGGGGGGCGGG.GGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCGTGCCCCCGGG.GGCAGGTT.CCCCCCCTGAAAAACCTGCCTGCGCGCGGCGcc                   >  1:4386855/1‑100 (MQ=255)


                                                                              ttccttgtggggggggGGGC.GGGTGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGc                    <  1:922659/92‑1 (MQ=18)


                                                                               tctttTC.GGGGGGGCGGG.GGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCGGGGGTGGCCCGGGGG.GCAAGCTT.CCCCCCCCGAAAACCTGCCCTGCGCGCGGCGCt                   >  1:1162582/1‑101 (MQ=255)


                                                                                tttttgggggggggGGGG.GGGTGAGC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCtt                  <  1:2135367/94‑1 (MQ=17)


                                                                                ctttTC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt                 <  1:5165026/101‑1 (MQ=21)


                                                                                ctttTC.GGGGGGGCGGG.GGGGGAAGGC.CCCCCCGG..GG...G...GG.CCCCGGGGTGGCCCGGGGG.GAAGGGTC.CCCCCCGCGAAAACCTTTCC.GCGCGCGCCggctt                 >  2:6227605/1‑97 (MQ=255)


                                                                                 ttttgggggggggGGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt                 <  1:383728/95‑1 (MQ=17)


                                                                                 tttcC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTc                <  2:3750071/101‑1 (MQ=18)


                                                                                  tttC.GGGGGGGCGGG.GGGCGAAG...CCCCCCGCG.GG...G...CG.CCTCCGGGTTGCCCGAGGC.GGAAGCTT.CCCCCCCCGAAAAACCTGCCTGCGCGCGGCCCCTTcc               >  2:6345974/1‑101 (MQ=2)


                                                                                   ttgggggggggGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc               <  1:4961944/97‑1 (MQ=18)


                                                                                   ttC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc              <  2:796891/101‑1 (MQ=21)


                                                                                   ttC.GGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc              <  2:3511610/101‑1 (MQ=21)


                                                                                     tggggggggGGGG.GGGGGAGG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCt             <  1:322251/99‑1 (MQ=18)


                                                                                     c.GGGGGGGCGTG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCtt            <  2:2246000/101‑1 (MQ=18)


                                                                                     c.GGGGGGGCGGG.GGGGGAAG...CCCCCCGCG.GG...G...CG.CCCCCGGCGTGCCCGCGGCGGAAACGTC.CCCCCCCCGAAAACC.TGCCCCCGCGCGGCGCTTTCCCtt            >  2:8016072/1‑101 (MQ=255)


                                                                                        ggggggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc          <  2:8516181/101‑1 (MQ=21)


                                                                                        ggggggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc          <  2:1136105/101‑1 (MQ=21)


                                                                                           gggGGGG.GGGTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc       <  1:6303815/101‑1 (MQ=21)


                                                                                           gggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc       <  1:5688135/101‑1 (MQ=21)


                                                                                             gCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccc     <  2:3950001/101‑1 (MQ=21)


                                                                                              cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg    >  2:267526/1‑101 (MQ=21)


                                                                                              cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg    >  1:3962372/1‑101 (MQ=21)


                                                                                              cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg    >  2:2430284/1‑101 (MQ=21)


                                                                                              cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg    <  2:1699815/101‑1 (MQ=21)


                                                                                               ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccccg   >  2:5569540/1‑99 (MQ=21)


                                                                                               ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCgc   >  1:7707072/1‑100 (MQ=21)


                                                                                               ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGCCGCTTTCCCTTTCGGCCCgg   >  2:705857/1‑101 (MQ=21)


                                                                                                gg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGgc  <  2:2717010/101‑1 (MQ=21)


CCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGG.GGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC  >  NC_014034/1732756‑1732948

Base quality scores:


ATCG

< 3 ≤


ATCG

< 12 ≤


ATCG

< 22 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG