New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1193628	17 (0.090)	12 (0.070)	6/172	26.3	0.39	intergenic (+93/‑158)	metK/trmB	methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase
	?	NC_014034	3333491 =	20 (0.090)					intergenic (+37/‑129)	ccmH/paaG	cytochrome c‑type biogenesis protein CcmH/enoyl‑CoA hydratase
Rejected: Position hash score below cutoff.

GAAGAAAGCGGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC............................................................................................  >  NC_014034/1193520‑1193628 ...................................................................................................GGCGACCCGCGGGCGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGGC  >  NC_014034/3333491‑3333582                                                                                                                                                                                                                         gacgCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCGCGGGCAAGCCCGAGGCGACCCGCGGGGGG                                                                                        <  1:1363793/97‑1 (MQ=12)                AGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTGGGGCAAGCCCGAGGCGACCCGCGGGGGGC                                                                                       <  1:3256380/101‑1 (MQ=17)                AGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGC                                                                                       <  1:4139923/101‑1 (MQ=32)                   CGGTTTCAAAAGATCCGGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCC                                                                                    <  1:193569/101‑1 (MQ=2)                    GGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGCGGCGACCCGCGGGGGGgggcc                                                                                   >  1:2044746/1‑96 (MQ=12)                        TCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCC                                                                               <  1:2681289/101‑1 (MQ=17)                          AAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCC                                                                             <  2:1277393/101‑1 (MQ=17)                          AAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCC                                                                             <  2:3199317/101‑1 (MQ=17)                           AAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCG                                                                            <  1:3238841/101‑1 (MQ=17)                            AAGATCGCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGC                                                                           <  1:1195336/101‑1 (MQ=12)                                 cgCGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAATCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCC                                                                      <  2:3070762/99‑1 (MQ=255)                                     GGGAGGGGGGCTTCGGCCCCCTTTTTCAGGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGG                                                                  <  1:210040/101‑1 (MQ=255)                                                                                                                                                                                                           GAAGAAAGCGGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC............................................................................................  >  NC_014034/1193520‑1193628 ...................................................................................................GGCGACCCGCGGGCGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGGC  >  NC_014034/3333491‑3333582 Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 14 ≤  ATCG  < 22 ≤  ATCG  < 35 ≤  ATCG