New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1193628	17 (0.090)	12 (0.070)	6/172	26.3	0.39	intergenic (+93/‑158)	metK/trmB	methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase
	?	NC_014034	3333491 =	20 (0.090)					intergenic (+37/‑129)	ccmH/paaG	cytochrome c‑type biogenesis protein CcmH/enoyl‑CoA hydratase
Rejected: Position hash score below cutoff.

AGCCGGTGCCGGTGCTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGCGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGGCGCCCGCGCG  >  NC_014034/3333393‑3333591                                                                                                   |                                                                                                     agCCGGTGCCGGTGCTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCgcggg                                                                                                    <  1:4202019/101‑1 (MQ=255)    gggggccggtgcTCTCGGCGGAGGAAGAGGCGCGGGTGAAAGACCTGCTGAGGGACTAGGGATTTCGCCGGGGGCTTGCGCCCCGGGCGACCCgcgggggg                                                                                                 <  1:32878/97‑1 (MQ=255)     ggtgccggtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGgggggc                                                                                                <  2:1332814/101‑1 (MQ=255)      gtgccggtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCt                                                                                               <  2:2429658/101‑1 (MQ=255)      gtgccggtgcGCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCt                                                                                               <  2:1788937/101‑1 (MQ=255)        gccggtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTcc                                                                                             <  1:2382721/101‑1 (MQ=255)        gccggtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATGTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTcc                                                                                             <  2:3963127/101‑1 (MQ=255)            gtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGccc                                                                                         <  1:1926742/101‑1 (MQ=255)            gtgcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGccc                                                                                         <  1:2117600/101‑1 (MQ=255)              gcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGccccc                                                                                       <  1:3221431/101‑1 (MQ=255)              gcTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGccccc                                                                                       <  2:3144300/101‑1 (MQ=255)                 ctcGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGc                                                                                    <  1:2688702/101‑1 (MQ=255)                     gCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCAccc                                                                                <  1:313837/101‑1 (MQ=255)                      gcGAGGAAGAGGCGCGGCGGAAAGACCTGATGAAGGACTAGGGATTCCGCCCGGGGCTTGGGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcccc                                                                               <  1:3951362/100‑1 (MQ=37)                      ccGAGGAAGAGGCGGGGCTGAAAGGCCTGCGGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGGCCCGCGGGGGGCTCCGCCCCCCGCAcccc                                                                               <  2:2603542/101‑1 (MQ=38)                       cGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCAccccc                                                                              <  1:3189050/101‑1 (MQ=255)                        gAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcccccc                                                                             <  1:1336692/101‑1 (MQ=255)                            aaGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGc                                                                         <  1:503018/101‑1 (MQ=255)                            aaGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGc                                                                         <  1:3240671/101‑1 (MQ=255)                                  cgcgGCGGAAAGACCTGCTGAAGGCGTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTAttt                                                                   <  1:830792/101‑1 (MQ=37)                                       cTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCa                                                              <  1:525094/101‑1 (MQ=255)                                             gACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGaaa                                                        <  2:2917219/101‑1 (MQ=255)                                                   ctgAAGGACTAGGGTTTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCggg                                                  <  2:1558655/101‑1 (MQ=255)                                                            tAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTc                                         <  1:3437445/101‑1 (MQ=255)                                                                 aTTTCGCCGGGGGCTGGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGAc                                    <  1:1171364/101‑1 (MQ=255)                                                                 aTTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGAc                                    <  2:1340171/101‑1 (MQ=255)                                                                              cTTGCGCCGCGGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCt                       <  2:635721/101‑1 (MQ=255)                                                                                         ggCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCgg            <  2:447848/101‑1 (MQ=255)                                                                                          gCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGgc           <  2:1651418/101‑1 (MQ=255)                                                                                               cgggggggggCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGGCGCCcg      <  2:1503268/97‑1 (MQ=255)                                                                                                   ggggggCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTTGCTTTGCCTTTCGGCGCCcgcgcg  >  1:598387/1‑101 (MQ=255)                                                                                                   |                                                                                                     AGCCGGTGCCGGTGCTCTCGGCCGAGGAAGAGGCGCGGCTGAAAGACCTGCTGAAGGACTAGGGATTTCGCCCGGGGCTTGCGCCCCGGGCGACCCGCGGGCGGCTCCGCCCCCCGCACCCCCCGGGCGTATTTTGCCAAGGAAAAGCGGGGGTCTGGTCGTGACGTTTGGTTTCGCTTTGCCTTTCGGCGCCCGCGCG  >  NC_014034/3333393‑3333591 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 21 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG