New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1692142	188 (0.980)	3 (0.020)	3/182	30.1	0.02	coding (47/201 nt)	RCAP_rcc01560	hypothetical protein
	?	NC_014034	= 3598287	185 (0.870)					coding (1130/1167 nt)	RCAP_rcc03393	lytic murein transglycosylase
Rejected: Position hash score below cutoff.

GTGTTCATCAGCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCG....................................................................................................  >  NC_014034/1692034‑1692142 ....................................................................................................TGCCCGCCGATGCCTGGCCGACGCCTGCGCTGCTGGACCGGCTCTGATCAATCCTCGCGGAAGGCGCGGGTGAAATAATCGGTGAAGGGCTTGGTCAGATAGGCCAGCG  <  NC_014034/3598287‑3598188                                                                                                                                                                                                                                                  TGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGATGCCTGGCCGACGCCTGCGCTG                                                                               >  2:2757599/1‑101 (MQ=255)                                                                   CCGCCGGTCAGAACCCCGGCGACCAGCAGGACGATGCCCGCCGATGCCTGGCCGACGCCTGCGCTGCTGGACCGGCTCTGATCAATCCTCGCGGAAGGCGC                                            <  1:2757818/101‑1 (MQ=255)                                                                                               gggccATGCCCGCCGATGCCTGGCCGACGCCCGCGCTGCTGGACCGGCTCTGATCAATCCTCGCGGAAGCCGCGGGTGAAATAATCGGTGAAGGGCTTGGT                <  2:563229/96‑1 (MQ=255)                                                                                                                                                                                                                   GTGTTCATCAGCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCG....................................................................................................  >  NC_014034/1692034‑1692142 ....................................................................................................TGCCCGCCGATGCCTGGCCGACGCCTGCGCTGCTGGACCGGCTCTGATCAATCCTCGCGGAAGGCGCGGGTGAAATAATCGGTGAAGGGCTTGGTCAGATAGGCCAGCG  <  NC_014034/3598287‑3598188 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG