New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1692142188 (0.980)3 (0.020) 3/182 30.1 0.02 coding (47/201 nt) RCAP_rcc01560 hypothetical protein
?NC_014034 = 3598287 185 (0.870)coding (1130/1167 nt) RCAP_rcc03393 lytic murein transglycosylase
Rejected: Position hash score below cutoff.

Only 100 of 208 total aligned reads displayed.

CAGCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCTTAG  >  NC_014034/1692042‑1692242
                                                                                                    |                                                                                                    
caGCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCccgccg                                                                                                      >  2:2280070/1‑101 (MQ=255)
 aGCCCGGTGGCCAGCGGCACGATGCCTATCAGGAAAATCCAGTTGTAGCCCGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCcgccgc                                                                                                     <  1:3554280/101‑1 (MQ=255)
  gCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCcgcg                                                                                                    >  1:455403/1‑101 (MQ=255)
  gCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCcgcg                                                                                                    >  1:333079/1‑101 (MQ=255)
    ccGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGAt                                                                                                  <  2:1064662/101‑1 (MQ=255)
    ccGGGGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGAt                                                                                                  <  2:2146880/101‑1 (MQ=255)
      ggTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATgc                                                                                                <  1:3644352/101‑1 (MQ=255)
      ggTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATgc                                                                                                >  1:3415838/1‑101 (MQ=255)
      ggTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATgc                                                                                                <  1:3182950/101‑1 (MQ=255)
        tGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATgcgc                                                                                              <  2:2977317/101‑1 (MQ=255)
             aGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGttt                                                                                         >  1:2262181/1‑101 (MQ=255)
              gCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTc                                                                                        <  2:1460719/101‑1 (MQ=255)
               cGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCt                                                                                       >  2:372463/1‑101 (MQ=255)
                  cACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGt                                                                                    >  1:3221015/1‑101 (MQ=255)
                   aCGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTc                                                                                   >  1:4023494/1‑101 (MQ=255)
                    cGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTcc                                                                                  >  2:3515240/1‑101 (MQ=255)
                    cGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTcc                                                                                  <  1:3501412/101‑1 (MQ=255)
                    cGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTcc                                                                                  >  2:3244092/1‑101 (MQ=255)
                     gATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCa                                                                                 >  1:184062/1‑101 (MQ=255)
                      aTGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCAt                                                                                <  2:778632/101‑1 (MQ=255)
                      aTGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCAt                                                                                >  1:1999658/1‑101 (MQ=255)
                         ccGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATgcc                                                                             <  2:3559930/101‑1 (MQ=255)
                            aTCAGGAAAATCCAGTTGTACCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATgccgcc                                                                          <  2:2259952/101‑1 (MQ=255)
                              cAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCca                                                                        <  2:1999532/101‑1 (MQ=255)
                               aGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCcac                                                                       <  1:2618309/101‑1 (MQ=255)
                               aGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCcac                                                                       <  1:3515493/101‑1 (MQ=255)
                                ggAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCcaca                                                                      <  1:930323/101‑1 (MQ=255)
                                  aaaaTCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACAtt                                                                    >  1:3613939/1‑101 (MQ=255)
                                    aaTCCAGTTGTAGCCCGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCGTGCCGCCCACATTgg                                                                  <  1:2385173/101‑1 (MQ=255)
                                    aaTCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAACCCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGTCGCCCACATTgg                                                                  <  1:2295546/101‑1 (MQ=255)
                                    aaTCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGCCCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCCTGTCCATGCCGCCCCCATTgg                                                                  >  1:3082121/1‑101 (MQ=255)
                                    aaTCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTgg                                                                  >  1:4126227/1‑101 (MQ=255)
                                      tCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTc                                                                >  2:3752621/1‑101 (MQ=255)
                                       ccAGTTGTAGCCCGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCt                                                               <  2:1663864/101‑1 (MQ=255)
                                       ccAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCt                                                               <  1:1469165/101‑1 (MQ=255)
                                       ccAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCt                                                               <  2:679386/101‑1 (MQ=255)
                                         aGTTGTAGCCCGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTg                                                             <  1:3244333/101‑1 (MQ=255)
                                         aGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTg                                                             >  1:2840034/1‑101 (MQ=255)
                                           ttGTAGCCCGCTTCTCCTCCGGTCATAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGaa                                                           <  1:1269478/101‑1 (MQ=255)
                                           ttGTAGCCCGCTTCGCCGCCGGTCAGAACCCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGaa                                                           <  2:3820063/101‑1 (MQ=255)
                                            tGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAAc                                                          >  2:3280821/1‑101 (MQ=255)
                                            tGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAAc                                                          >  1:1062181/1‑101 (MQ=255)
                                                gCCCGCTTCACCGCCGGTCAGAAGCCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACAtct                                                      <  2:4125966/101‑1 (MQ=255)
                                                 cccGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACAtctc                                                     <  1:3938256/101‑1 (MQ=255)
                                                  ccGCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATctct                                                    <  1:2978821/101‑1 (MQ=255)
                                                  ccGATTCACCGCCGGTCAGAACCCCGGCGACCAGCGGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATctct                                                    <  2:341699/101‑1 (MQ=255)
                                                    gCTTCCCCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTg                                                  <  2:2870057/101‑1 (MQ=255)
                                                    gCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTg                                                  <  1:1394766/101‑1 (MQ=255)
                                                     cTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGc                                                 >  1:522515/1‑101 (MQ=255)
                                                      ttCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCt                                                <  1:1654683/101‑1 (MQ=255)
                                                       tccccgccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTc                                               <  2:1966983/98‑1 (MQ=255)
                                                       tCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTc                                               >  2:3961396/1‑101 (MQ=255)
                                                        cACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTcc                                              >  2:4019250/1‑101 (MQ=255)
                                                           cgccgGTCAGAACCCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCtt                                           <  2:1756122/101‑1 (MQ=255)
                                                           cgccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCtt                                           <  2:2359041/101‑1 (MQ=255)
                                                           cgccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCtt                                           >  1:2550661/1‑101 (MQ=255)
                                                           cgccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCtt                                           >  2:1220759/1‑101 (MQ=255)
                                                            gccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTg                                          >  2:3573219/1‑101 (MQ=255)
                                                            gccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTg                                          <  2:1006299/101‑1 (MQ=255)
                                                             ccgGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTgg                                         <  1:372514/101‑1 (MQ=255)
                                                               ggTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGgtg                                       <  2:1212659/101‑1 (MQ=255)
                                                               ggTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGgtg                                       >  1:628829/1‑101 (MQ=255)
                                                               ggTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGgtg                                       >  2:1118781/1‑101 (MQ=255)
                                                                gTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGgtgt                                      <  2:2560480/101‑1 (MQ=255)
                                                                 tCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTc                                     <  2:149338/101‑1 (MQ=255)
                                                                  cAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCa                                    <  2:453474/101‑1 (MQ=255)
                                                                   aGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAg                                   >  1:3860552/1‑101 (MQ=255)
                                                                    gAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGa                                  <  2:3384417/101‑1 (MQ=255)
                                                                    gAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAAAATCTCTTGCTCCCTTGGTGTCAGa                                  >  2:2765736/1‑101 (MQ=255)
                                                                      aaCCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAg                                <  1:447005/101‑1 (MQ=255)
                                                                        cccGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGTTGTCacattgc                              >  1:513636/1‑95 (MQ=255)
                                                                        cccGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGc                              >  1:2739737/1‑101 (MQ=255)
                                                                         ccGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGcc                             <  1:1242290/101‑1 (MQ=255)
                                                                             cGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGt                         >  2:1319551/1‑101 (MQ=255)
                                                                                 cagcagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTcc                     >  2:2460385/1‑101 (MQ=255)
                                                                                 cagcagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTcc                     <  1:2369793/101‑1 (MQ=255)
                                                                                 cagcagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTcc                     <  2:616470/101‑1 (MQ=255)
                                                                                  agcagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCg                    <  1:3380347/101‑1 (MQ=255)
                                                                                    cagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGtctcagat                  >  1:1497987/1‑97 (MQ=255)
                                                                                    cagGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGc                  >  2:2380843/1‑101 (MQ=255)
                                                                                     agGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGcc                 >  2:1501611/1‑101 (MQ=255)
                                                                                        gcgctGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGAt              <  1:3562979/97‑1 (MQ=255)
                                                                                        aCGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGAt              <  1:1073779/101‑1 (MQ=255)
                                                                                         cGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATg             <  2:2634852/101‑1 (MQ=255)
                                                                                         cGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATg             <  2:1877833/101‑1 (MQ=255)
                                                                                           aTGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCGGATGGc           >  1:1721492/1‑101 (MQ=255)
                                                                                           aTGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGc           >  1:127521/1‑101 (MQ=255)
                                                                                             gCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTg         >  1:3747075/1‑101 (MQ=255)
                                                                                             gCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTg         >  1:1897223/1‑101 (MQ=255)
                                                                                             gCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTg         <  1:819655/101‑1 (MQ=255)
                                                                                             ccccGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTg         <  1:651809/100‑1 (MQ=255)
                                                                                              cccGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGa        >  2:3330695/1‑101 (MQ=255)
                                                                                              cccGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGa        <  1:2164345/101‑1 (MQ=255)
                                                                                               ccgccgCGATGCGCAGTTTCTTGTCCATGCGGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGAc       >  2:4056715/1‑101 (MQ=255)
                                                                                                cgccgcGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGAcc      >  1:2361624/1‑101 (MQ=255)
                                                                                                cgccgcGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGAcc      >  1:2578645/1‑101 (MQ=255)
                                                                                                 gccgcGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCt     >  2:1364047/1‑101 (MQ=255)
                                                                                                   cgcgATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCTTa   >  2:1420633/1‑101 (MQ=255)
                                                                                                    gcgATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCTTAg  <  2:3031144/101‑1 (MQ=255)
                                                                                                    gcgATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCTTAg  >  2:430010/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CAGCCCGGTGGCCAGCGGCACGATGCCGATCAGGAAAATCCAGTTGTAGCCCGCTTCACCGCCGGTCAGAAACCCGGCGACCAGCAGGACGATGCCCGCCGCGATGCGCAGTTTCTTGTCCATGCCGCCCACATTGGTCTTGAACATCTCTTGCTCCCTTGGTGTCAGAAGGCCGGGTCTCCGGCCGATGGCTGACCTTAG  >  NC_014034/1692042‑1692242

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG