BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	221943 =	188 (0.940)	10 (0.050)	4/188	29.6	0.04	coding (714/2748 nt)	RCAP_rcc00185	hypothetical protein
*	?	NC_014034	= 222122	240 (1.130)	10 (0.050)	4/188	29.6	0.04	coding (535/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.


TCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACCGAGCCCACG....................................................................................................  <  NC_014034/222048‑221943


....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGG  <  NC_014034/222122‑222023


                                              CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC                                                             >  1:1532205/1‑101 (MQ=0)


                                              CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC                                                             >  1:2491673/1‑101 (MQ=0)


                                              CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC                                                             <  1:3886261/101‑1 (MQ=0)


                                              CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC                                                             <  2:3230250/101‑1 (MQ=0)


                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCca                                                           >  1:999493/1‑99 (MQ=0)


                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGc                                                           >  1:1467812/1‑100 (MQ=0)


                                                 ACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC                                                          >  1:2915890/1‑101 (MQ=0)


                                                  CCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACc                                                         <  1:3060961/101‑2 (MQ=0)


                                                  CCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACc                                                         <  1:595810/101‑2 (MQ=0)


                                                   CGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACcg                                                        <  1:2960612/101‑3 (MQ=0)


TCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACCGAGCCCACG....................................................................................................  <  NC_014034/222048‑221943


....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGG  <  NC_014034/222122‑222023

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 23 ≤


ATCG

< 31 ≤


ATCG

< 41 ≤


ATCG