New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 378843	157 (0.820)	2 (0.010)	2/180	31.1	0.01	coding (1354/1404 nt)	RCAP_rcc00351	sensor histidine kinase
	?	NC_014034	388767 =	197 (0.930)					coding (719/1173 nt)	macA	macrolide export ABC transporter macrolide‑specific efflux protein MacA
Rejected: Position hash score below cutoff.

AAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGCGGAACTGGTGCGCGGTCACGGCGGGCGGCTGGAGCTGGAGCGCAGCGACGAGACCGGCACCGAATTCCGCC....................................................................................................  >  NC_014034/378735‑378843 ...................................................................................................GAATTCCGCCGCTTGCCCCGGCTTCACCGCCACCACATCGGCTTCGGAAATCTCCGCCTTGACCACCATCCGGTCCAGCTCGGCCAGTTTCACGATCGTCGGGCTGGAGG  >  NC_014034/388767‑388866                                                                                                                                                                                                                                                                               GGGCGGCTGGAGCTGGAGCGCAGCGACGAGACCGGCACCGAATTCCGCCGCTTGCCCCGGCTTCACCGCCACCACATCGGCTTCGGAAATCTCCGCCTTGA                                                  >  1:985608/1‑101 (MQ=255)                                                                             gGCGCAGCGACGAGACCGGCACCGAATTCCGCCGCTTGCCCCGGCTTCACCGCCACCACATCGGCTTCGGAAATCTCCGCCTTGACCACCATCCGGTCCAG                                  <  2:985517/100‑1 (MQ=255)                                                                                                                                                                                                                   AAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGCGGAACTGGTGCGCGGTCACGGCGGGCGGCTGGAGCTGGAGCGCAGCGACGAGACCGGCACCGAATTCCGCC....................................................................................................  >  NC_014034/378735‑378843 ...................................................................................................GAATTCCGCCGCTTGCCCCGGCTTCACCGCCACCACATCGGCTTCGGAAATCTCCGCCTTGACCACCATCCGGTCCAGCTCGGCCAGTTTCACGATCGTCGGGCTGGAGG  >  NC_014034/388767‑388866 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG