BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1398002	140 (1.020)	37 (0.270)	2/130	25.9	0.23	intergenic (+306/+1592)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
*	?	NC_014034	1434813 =	107 (0.510)	37 (0.270)	2/130	25.9	0.23	intergenic (‑592/‑366)	RCAP_rcc01334/RCAP_rcc01335	hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 225 total aligned reads displayed.


GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGC  >  NC_014034/1397903‑1398102


gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                                                     <  2:1788750/101‑1 (MQ=255)


 tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccg                                                                                                    <  2:2340037/101‑1 (MQ=255)


  cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccgc                                                                                                   >  2:1257540/1‑101 (MQ=255)


   cccccccccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccgcc                                                                                                  <  2:3252300/98‑1 (MQ=255)


     tCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACcgccgc                                                                                                >  1:308550/1‑101 (MQ=255)


     tCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACcgccgc                                                                                                >  1:4145408/1‑101 (MQ=255)


      ccccccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCcgcg                                                                                               >  1:782689/1‑101 (MQ=255)


       cccccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCgcgc                                                                                              <  2:3471850/101‑1 (MQ=255)


       cccccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCgcgc                                                                                              <  2:2628982/101‑1 (MQ=255)


         cccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCaa                                                                                            <  2:3568590/101‑1 (MQ=255)


          ccGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGACGCGCaaa                                                                                           >  2:4123689/1‑101 (MQ=255)


            gcgGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCaaaaa                                                                                         <  2:2031602/101‑1 (MQ=255)


            gcgGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCaaaaa                                                                                         <  2:2830277/101‑1 (MQ=255)


              gggggCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGc                                                                                       >  2:3105672/1‑101 (MQ=255)


              gggggCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGc                                                                                       >  2:2851622/1‑101 (MQ=255)


              gggggCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGc                                                                                       >  2:1672290/1‑101 (MQ=255)


               ggggCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGcc                                                                                      >  1:2957126/1‑101 (MQ=255)


                 ggCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCg                                                                                    <  2:1153036/101‑1 (MQ=255)


                  gCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGc                                                                                   <  1:2489342/101‑1 (MQ=255)


                    gTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCgaga                                                                                 >  2:3200136/1‑98 (MQ=255)


                    gTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCa                                                                                 >  2:535857/1‑101 (MQ=255)


                      ggATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCaag                                                                               >  1:2456768/1‑101 (MQ=255)


                      ggATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCaag                                                                               >  1:3958117/1‑101 (MQ=255)


                       gATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCaaga                                                                              >  2:3065371/1‑101 (MQ=255)


                        aTCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCaagaa                                                                             <  1:2395249/101‑1 (MQ=255)


                           gAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCg                                                                          <  2:3300552/101‑1 (MQ=255)


                           gAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCg                                                                          >  2:69060/1‑101 (MQ=255)


                            aaaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCgg                                                                         >  2:1600391/1‑101 (MQ=255)


                            aaaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAAAAGCgg                                                                         >  1:3448634/1‑101 (MQ=255)


                             aaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGC.AAAAGCCCGCCAAGAAGCGGAg                                                                       >  1:4020350/1‑101 (MQ=255)


                              aCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAg                                                                       >  1:3418494/1‑101 (MQ=255)


                                tctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCa                                                                     <  1:509933/101‑1 (MQ=255)


                                 ctcttccgatctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCaa                                                                    <  2:817024/91‑1 (MQ=255)


                                 ctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCCCCAAGAAGCGGAGCaa                                                                    >  1:4219010/1‑101 (MQ=255)


                                  tATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAg                                                                   <  2:439754/101‑1 (MQ=255)


                                  tATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAg                                                                   <  1:3372700/101‑1 (MQ=255)


                                  tATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAg                                                                   >  2:2787372/1‑101 (MQ=255)


                                    tGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTc                                                                 >  1:1596646/1‑101 (MQ=255)


                                      ggaggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAACGGAGCAAGTCGc                                                               >  2:4062468/1‑101 (MQ=255)


                                          gctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTccc                                                           <  2:2021657/101‑1 (MQ=255)


                                            tagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTccccc                                                         >  1:1699759/1‑101 (MQ=255)


                                             agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                        >  2:2706600/1‑101 (MQ=255)


                                             agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                        <  1:2565927/101‑1 (MQ=255)


                                             agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                        >  1:2431104/1‑101 (MQ=255)


                                             agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                        <  1:1678854/101‑1 (MQ=255)


                                              gggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCcg                                                       >  1:1485584/1‑101 (MQ=255)


                                               ggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCcgc                                                      >  2:3633743/1‑101 (MQ=255)


                                                 aggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCgg                                                    <  2:1351667/101‑1 (MQ=255)


                                                  ggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCggg                                                   >  1:2821169/1‑101 (MQ=255)


                                                    ctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCggggg                                                 <  2:1981608/101‑1 (MQ=255)


                                                     taCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGc                                                <  2:453992/101‑1 (MQ=255)


                                                      aCGCACCTTCAAAAGTCGCTCCCCCCGCGGGCGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCg                                               >  1:3786857/1‑101 (MQ=255)


                                                        gCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCggg                                             >  2:1013985/1‑99 (MQ=255)


                                                           cttccgatcttCGCGCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGAt                                          <  2:3965119/91‑1 (MQ=37)


                                                            cTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATc                                         >  1:1276249/1‑101 (MQ=255)


                                                              tCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGt                                       >  1:1109747/1‑101 (MQ=255)


                                                              tCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGt                                       >  1:1850863/1‑101 (MQ=255)


                                                               cAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTa                                      <  2:2416932/101‑1 (MQ=255)


                                                                aaaaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTaa                                     <  1:455169/101‑1 (MQ=255)


                                                                 aaaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAg                                    >  2:1466486/1‑101 (MQ=255)


                                                                 aaaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAg                                    <  2:1857768/101‑1 (MQ=255)


                                                                  aaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTNGCTCCCCCCGCCGGGGCGTGGATCGTAAGc                                   >  1:952339/1‑101 (MQ=255)


                                                                    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCgg                                 <  2:2646363/101‑1 (MQ=255)


                                                                      cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTg                               <  1:2787591/101‑1 (MQ=255)


                                                                        cTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCa                             >  1:474127/1‑101 (MQ=255)


                                                                        aacctgccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCa                             >  2:3915707/7‑101 (MQ=255)


                                                                         tCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCAt                            >  1:3258873/1‑101 (MQ=255)


                                                                         tCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGGGCAt                            >  1:140363/1‑101 (MQ=255)


                                                                         cccccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCAt                            <  2:3163148/100‑1 (MQ=255)


                                                                         cccccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCAt                            <  1:1245750/100‑1 (MQ=255)


                                                                          ccccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATc                           >  1:2114590/1‑101 (MQ=255)


                                                                           cccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCg                          <  1:2851841/101‑1 (MQ=255)


                                                                              ccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGcc                       <  2:2451668/101‑1 (MQ=255)


                                                                              ccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGcc                       <  1:1127121/101‑1 (MQ=255)


                                                                                gcgGGGGCGTGTATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCg                     <  2:341355/101‑1 (MQ=255)


                                                                                gcgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCg                     <  1:3802718/101‑1 (MQ=255)


                                                                                 cgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGa                    >  2:1491921/1‑101 (MQ=255)


                                                                                  gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGAt                   <  1:2007026/101‑1 (MQ=255)


                                                                                  gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGAt                   <  1:2706806/101‑1 (MQ=255)


                                                                                    gggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaa                 <  2:3865435/101‑1 (MQ=255)


                                                                                    gggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaa                 >  1:3059403/1‑101 (MQ=255)


                                                                                    gggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaa                 <  1:2347242/101‑1 (MQ=255)


                                                                                        gTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAccc             >  1:2179067/1‑101 (MQ=255)


                                                                                        gTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAccc             >  1:580205/1‑101 (MQ=255)


                                                                                         tGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAcccc            <  1:1602296/101‑1 (MQ=255)


                                                                                         tGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAcccc            >  1:306988/1‑101 (MQ=255)


                                                                                          tgATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCg           <  2:131178/100‑1 (MQ=255)


                                                                                          ggATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCg           <  1:816532/101‑1 (MQ=255)


                                                                                           gATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGa          >  1:3479215/1‑101 (MQ=255)


                                                                                              cGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAttt       <  1:3948665/101‑1 (MQ=255)


                                                                                              cGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAttt       >  2:653529/1‑101 (MQ=255)


                                                                                               gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt      >  2:3737250/1‑101 (MQ=255)


                                                                                               gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt      >  1:3196173/1‑101 (MQ=255)


                                                                                               gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt      <  2:4218748/101‑1 (MQ=255)


                                                                                               gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAACCCGAtttt      >  2:1913464/1‑101 (MQ=255)


                                                                                               gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTAGCTCCCCCCCCGGGGGCATGGATGGAAAGAGCTGCATCGACCAGCCAAACGCCGAtttt      >  1:3653407/1‑101 (MQ=255)


                                                                                                aaaCCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTc     >  2:2257503/1‑101 (MQ=255)


                                                                                                aaaCCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTc     >  1:4045811/1‑101 (MQ=255)


                                                                                                  cccgccgCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCgg   <  2:3549733/100‑1 (MQ=255)


                                                                                                  aCCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCgg   >  1:3206975/1‑101 (MQ=255)


GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGC  >  NC_014034/1397903‑1398102

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG