BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	51 (0.240)	18 (0.090)	4/198	30.4	0.19	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	= 2577295	104 (0.490)	18 (0.090)	4/198	30.4	0.19	intergenic (+217/‑212)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 108 total aligned reads displayed.


CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.C.GG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577196‑2577395


ccAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..ccc                                                                                                      >  1:3122250/1‑101 (MQ=255)


 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..cccc                                                                                                     <  1:3559430/101‑1 (MQ=255)


 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..cccc                                                                                                     <  1:3456669/101‑1 (MQ=255)


 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..cccc                                                                                                     <  1:3267541/101‑1 (MQ=255)


  aGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..ccccc                                                                                                    <  2:4183846/101‑1 (MQ=255)


      aaagccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCcggcg                                                                                                >  1:3182793/1‑101 (MQ=255)


       aagccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCcggcgg                                                                                               >  1:167011/1‑101 (MQ=255)


             aagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGcc                                                                                         <  1:2018972/101‑1 (MQ=255)


             aagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGcc                                                                                         >  2:857804/1‑101 (MQ=255)


                ccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCggg                                                                                      >  1:49367/1‑101 (MQ=255)


                 cGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTCATCTTGCCCAAAATATCCCGGGTAT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTGGCCgggg                                                                                     >  1:3615590/1‑101 (MQ=25)


                  gTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCggggg                                                                                    >  1:23822/1‑100 (MQ=255)


                    ccccGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCGGGGCGa                                                                                  >  1:1030210/1‑101 (MQ=255)


                    ccccGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCGGGGCGa                                                                                  >  2:2123998/1‑101 (MQ=255)


                      ccGGCAGGACCGAAGGCCTCAGGCCCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAg                                                                                <  1:2577306/101‑1 (MQ=255)


                        ggCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGcc                                                                              >  2:645493/1‑101 (MQ=255)


                        ggCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGcc                                                                              >  1:1007346/1‑101 (MQ=255)


                          cAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTAGCCGGGGCGaaagcgg                                                                            >  1:1676849/1‑96 (MQ=25)


                           aGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCcgcg                                                                           >  2:475541/1‑101 (MQ=255)


                            ggACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGGGCCCGGGCGACGGCgcgg                                                                          >  1:3790748/1‑101 (MQ=21)


                               ccGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCGGGGGGGAGCCGCGGGGa                                                                       >  1:1166823/1‑101 (MQ=21)


                                 gAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa                                                                     >  2:469254/1‑101 (MQ=255)


                                 gAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGCCGCCGGGGCGAAACCGCGGCGcaa                                                                     >  2:4059867/1‑101 (MQ=25)


                                   aGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGC.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATc                                                                   >  1:1550630/1‑101 (MQ=25)


                                    ggCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcc                                                                  >  1:3084164/1‑101 (MQ=255)


                                     gCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATccc                                                                 >  1:1961489/1‑101 (MQ=255)


                                       cTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccgg                                                               >  2:1094274/1‑101 (MQ=255)


                                       cTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATccccg                                                               >  1:2131612/1‑99 (MQ=255)


                                        tCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggc                                                              <  1:2826203/101‑1 (MQ=255)


                                         cAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGGAGCCGCGGCGAAATcccggcc                                                             >  2:3165865/1‑101 (MQ=255)


                                         cAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggcc                                                             >  1:1277594/1‑101 (MQ=255)


                                         cAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCCGGGGGGAGCCGCGGGGGAAAccccgcc                                                             >  1:2496814/1‑101 (MQ=18)


                                          aGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc                                                            >  1:1245505/1‑101 (MQ=255)


                                          aGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc                                                            >  1:2700125/1‑101 (MQ=255)


                                             cccccGGGTCCCTTTTTTTCTTCCCCAAACTGCCCGGGGGGT.C.G.GGCGG.CG.GAC..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccg                                                          <  2:1632707/100‑1 (MQ=16)


                                             aCCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGGCGCCGGGGCGAAGCCGCCGCGAAATcccggccccgg                                                         >  2:1420723/1‑101 (MQ=25)


                                                ccGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCCGCGAAATCCCGGCCCCGGCaa                                                      >  2:4077959/1‑101 (MQ=255)


                                                  ggg.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgc                                                    >  1:3718454/1‑101 (MQ=255)


                                                   gg.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgcg                                                   >  1:3233423/1‑101 (MQ=255)


                                                   gg.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgcg                                                   >  2:703071/1‑101 (MQ=255)


                                                      ccccTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGcc                                                 >  1:2011174/1‑101 (MQ=255)


                                                        ccTTTTATCTGGCCAAAAATGTCCCGGGGGT.CGG.GG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg                                               <  2:231002/101‑1 (MQ=21)


                                                         cTTTTATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTgg                                              >  1:2735844/1‑101 (MQ=255)


                                                          ttttATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTggg                                             >  1:893010/1‑101 (MQ=255)


                                                          ttttATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTggg                                             >  1:346092/1‑101 (MQ=255)


                                                            ttATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTGGGCg                                           >  1:4137285/1‑101 (MQ=255)


                                                            ttATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg                                           >  1:4222413/1‑101 (MQ=255)


                                                            ttATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg                                           >  1:2627130/1‑101 (MQ=255)


                                                             tATCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg                                          >  1:349324/1‑101 (MQ=255)


                                                               tCTTGCCCAAATTATCCCGGGGGT.C.CGGG.GG.CG.GAG..TCCCCGGCGGGTCGCCCGGGCGAAGCCCCGGCGCAATCCCGGGCCCGGCATTCGACTGGGCGGGa                                        >  2:2834574/1‑101 (MQ=18)


                                                               tCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGGAATCCCCGCCCCGGCAAGCGCCTGGGCgggg                                        >  2:1215429/1‑100 (MQ=21)


                                                               tCTTGCCCAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa                                        >  2:630152/1‑101 (MQ=255)


                                                               tCTGGCCCAAAAT.CCCCGGGGGTGC.C.GG.GGCCG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa                                        <  2:1873883/101‑1 (MQ=25)


                                                                    cccAAAATATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATc                                   <  2:2496630/101‑1 (MQ=255)


                                                                     caaaaaTACCCCGGGGGC.CGG.GG.GG.GG.GGG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcg                                  <  2:4021435/99‑1 (MQ=25)


                                                                       aaaaTATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcg                                <  2:1166729/101‑1 (MQ=255)


                                                                        aaaTATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgc                               >  1:3925752/1‑101 (MQ=255)


                                                                         aaTTTCCGGGGGGT.CGG.GG.GG.GG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg                              <  1:1327670/101‑1 (MQ=25)


                                                                         aaTATCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATcgcgcg                              >  1:184729/1‑101 (MQ=255)


                                                                          atatCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCgcgcgc                             >  2:1356038/1‑101 (MQ=255)


                                                                            atCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           >  2:2961243/1‑101 (MQ=255)


                                                                            atCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           >  2:702013/1‑101 (MQ=255)


                                                                            atCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           >  1:1944056/1‑101 (MQ=255)


                                                                            atCCCGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCCGGGCGGGAAGATCGCGCGccc                           >  1:1350701/1‑101 (MQ=255)


                                                                            atCCAGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGAGCGCGCGccc                           >  2:183947/1‑101 (MQ=25)


                                                                               gcGGGGGT.C.C.GG.GG.GGAGAT..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGTGGGAAGATCGCGCGCCCCgg                        <  1:1942880/100‑1 (MQ=37)


                                                                               ccGGGGGT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCgg                        <  2:1245409/101‑1 (MQ=255)


                                                                               ccGGGGGG.C.C.GG.GG.GG.GGGGCCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg                         <  2:3244661/101‑1 (MQ=37)


                                                                                 gggggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAg                      >  2:3244401/1‑101 (MQ=255)


                                                                                 gggggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAg                      >  1:1143442/1‑101 (MQ=255)


                                                                                 gggggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAg                      >  1:1032754/1‑101 (MQ=255)


                                                                                  ggggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGc                     >  1:184169/1‑101 (MQ=255)


                                                                                   gggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATCGCGCGCCCCGGAGCa                    >  2:337171/1‑101 (MQ=255)


                                                                                    ggT.C.CGGG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa                   >  2:1595704/1‑101 (MQ=255)


                                                                                     gggtcgggg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCa                    <  2:4072957/94‑1 (MQ=255)


                                                                                       gtccggg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCCGGGCGGGAAGATCGCGCGCCCCGGAGCAAt                  >  1:952372/6‑101 (MQ=255)


                                                                                          gggg.gg.CG.GGC..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGc               <  1:1639926/99‑1 (MQ=255)


                                                                                          gggg.gg.CG.GCC..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGc               <  1:702090/99‑1 (MQ=255)


                                                                                           ggg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:2801685/2‑101 (MQ=255)


                                                                                           ggg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:845589/2‑101 (MQ=255)


                                                                                           ggg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:1209316/2‑101 (MQ=255)


                                                                                            gg.gg.CG.GGC..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCACCCCGGAGCAATTGCGa             <  2:2735638/101‑1 (MQ=255)


                                                                                            gg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  2:2911639/1‑101 (MQ=255)


                                                                                            gg.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  1:509855/1‑101 (MQ=255)


                                                                                             g.gg.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            >  2:219923/1‑101 (MQ=255)


                                                                                              gcg.CG.GAC..CCCCGGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            <  2:1550526/99‑1 (MQ=255)


                                                                                                  cG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACg         >  1:3689687/1‑101 (MQ=255)


                                                                                                   gccggccccccgGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGaca           <  2:346041/94‑1 (MQ=255)


                                                                                                   g.gAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGc        >  1:3354462/1‑101 (MQ=255)


                                                                                                   g.gAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGCTAAGATCGCGCGCCCCGGAGGAATTGCGACACGc        >  1:3634543/1‑101 (MQ=255)


                                                                                                     gAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGcc       >  1:2226682/1‑101 (MQ=255)


                                                                                                     gAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGcc       >  1:2637606/1‑101 (MQ=255)


                                                                                                      aG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGGCCCGGCAAGCGCCCGGGCGGGAAGACCGCGCGCCCCGGAGCAATTGCGAAACGCCa      >  1:2032709/1‑101 (MQ=38)


                                                                                                      aG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCa      >  2:1820376/1‑101 (MQ=255)


                                                                                                       g..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCAc     >  1:1575712/1‑101 (MQ=255)


                                                                                                       g..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCAc     >  1:1373521/1‑101 (MQ=255)


                                                                                                           ccccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCt   <  2:3182554/101‑1 (MQ=255)


                                                                                                            cccGGCGGGTCGCGGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTg  <  2:3122019/101‑1 (MQ=255)


                                                                                                            cccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTg  <  2:1274827/101‑1 (MQ=255)


                                                                                                            cccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTg  <  1:1356138/101‑1 (MQ=255)


CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGT.C.C.GG.GG.CG.GAG..CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577196‑2577395

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 21 ≤


ATCG

< 31 ≤


ATCG

< 40 ≤


ATCG