BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	78 (0.390)	45 (0.220)	15/190	21.6	0.32	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	2640144 =	114 (0.540)	45 (0.220)	15/190	21.6	0.32	intergenic (‑120/+156)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 121 total aligned reads displayed.


GCGGCTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..CTT.C.GGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGT  >  NC_014034/2640045‑2640244


gcggcTACAAAGCGCCCTGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGTCGCTTTTGCGCAGGCAAAAGGGGGgcg                                                                                                            <  2:629784/101‑1 (MQ=255)


  ggcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGAGGCGCt                                                                                                          >  2:3088994/1‑101 (MQ=255)


   gcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTg                                                                                                         <  2:4111508/101‑1 (MQ=255)


   gcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGAAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTg                                                                                                         <  1:2044965/101‑1 (MQ=255)


    cTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.c                                                                                                       <  1:3397396/101‑1 (MQ=255)


    cTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.c                                                                                                       <  1:2146644/101‑1 (MQ=255)


     tACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGAGGCGGTG.cc                                                                                                      >  2:1203678/1‑101 (MQ=255)


       cAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.cccc                                                                                                    <  1:1656149/101‑1 (MQ=255)


        aaaGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.ccccc                                                                                                   <  1:2464079/101‑1 (MQ=255)


          aGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCct                                                                                                 <  1:820729/101‑1 (MQ=255)


          aGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCct                                                                                                 <  2:3007372/101‑1 (MQ=255)


           gcgcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCctc                                                                                                <  1:3787005/101‑1 (MQ=255)


           gcgcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCctc                                                                                                <  2:2054178/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGGGG.cccccccccc                                                                                              >  2:3686680/1‑97 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.tt                                                                                             <  1:3713616/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.tt                                                                                             <  2:3873353/101‑1 (MQ=255)


              cccGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTg                                                                                            <  2:1719738/101‑1 (MQ=255)


                  gTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTG.ccccccccctttccc                                                                                         >  1:67359/1‑92 (MQ=255)


                    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..ccttc                                                                                    <  1:3905064/101‑5 (MQ=255)


                    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..ccttc                                                                                    <  2:1678168/101‑5 (MQ=255)


                     gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..ccttcg                                                                                   <  2:3731326/101‑6 (MQ=255)


                     gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..ccttcg                                                                                   <  2:3513082/101‑6 (MQ=255)


                     gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCACGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..ccttcg                                                                                   <  1:3622582/101‑6 (MQ=255)


                      cGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.gg                                                                                 <  2:3615035/101‑1 (MQ=255)


                        ggTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGcc                                                                               <  2:3097506/101‑1 (MQ=255)


                         gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCa                                                                              <  2:3780453/101‑1 (MQ=255)


                         gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCa                                                                              <  1:2674748/101‑1 (MQ=255)


                         gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCa                                                                              <  2:494749/101‑1 (MQ=255)


                           tATGATGCTCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAAt                                                                            <  2:3765055/101‑1 (MQ=255)


                           tATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAAt                                                                            <  2:2769921/101‑1 (MQ=255)


                             tgatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.c                                                                         <  1:3856135/101‑1 (MQ=255)


                                 gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CAccc                                                                     <  1:301120/101‑1 (MQ=255)


                                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CAccccc                                                                   <  1:2836532/101‑1 (MQ=255)


                                    ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CAcccccc                                                                  <  1:3982839/101‑1 (MQ=255)


                                     cGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCg                                                                 <  1:1320029/101‑1 (MQ=255)


                                      gggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGa                                                                <  2:2484439/101‑1 (MQ=255)


                                       ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAg                                                               <  1:667616/101‑1 (MQ=255)


                                          aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAAGGGGGGGCTGCCCCCCCCC.TTGC..CCT.CGGGCCAATT.CCcccccccggga                                                             >  1:3330557/1‑96 (MQ=255)


                                           tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCCATT.CACCCCCCGAGGGAt                                                           >  2:1279984/1‑101 (MQ=37)


                                           tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTAt                                                           <  2:3161143/101‑1 (MQ=255)


                                             cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTAttt                                                         <  2:2418875/101‑1 (MQ=255)


                                             cGACGCGGCGGCAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTAttt                                                         <  1:820020/101‑1 (MQ=25)


                                              gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTg                                                        <  1:663839/101‑1 (MQ=255)


                                               aCGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTgg                                                       <  2:2249054/101‑1 (MQ=255)


                                               aCGCGGCGGCAGGCGTGTCAACCGTGCCGCGTTGGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CCCCCCCCGAGGTATTTgg                                                       <  1:3925569/101‑1 (MQ=25)


                                                cgcgGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGa                                                      <  1:3522607/101‑1 (MQ=255)


                                                 gcggcgGGGGGCGTTTCGACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGGTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGag                                                     <  1:1345409/101‑2 (MQ=21)


                                                  cggcggCAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGagc                                                    <  1:758480/101‑3 (MQ=25)


                                                   ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                   <  2:2035462/101‑1 (MQ=37)


                                                   ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                   <  2:816660/101‑1 (MQ=37)


                                                   ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGAAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                   <  1:3662671/101‑1 (MQ=25)


                                                      ggcAGGCGTGTCAACCGTGGCGCTTTGGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGa                                                <  2:694869/101‑1 (MQ=25)


                                                       gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCCG.CCCCCCCC.CTTC..CTTCC.TGCCAATC.CTCCCCCCCCGCGATTTGGAGCaaaaa                                               >  1:1838174/1‑98 (MQ=255)


                                                         aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CCCCCCCCGAGGTATTTGGAGCAATATGa                                             <  2:4096019/101‑1 (MQ=25)


                                                          ggggttccacccGTGGCACTTTTGCCAAGGC.AAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa                                           <  2:3804816/91‑1 (MQ=17)


                                                          ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaa                                            <  1:1203772/101‑1 (MQ=25)


                                                           gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa                                           <  2:3662876/101‑1 (MQ=25)


                                                            cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaag                                          <  1:1732739/101‑2 (MQ=25)


                                                                  aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                   <  1:3137833/101‑1 (MQ=25)


                                                                  aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                   <  2:2487968/101‑1 (MQ=21)


                                                                   aCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                  <  1:3180511/101‑1 (MQ=25)


                                                                    ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.TGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg                                 <  2:3662767/101‑1 (MQ=25)


                                                                    ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg                                 <  1:1451997/101‑1 (MQ=25)


                                                                         gcgcTTCTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                            <  1:685582/101‑1 (MQ=21)


                                                                           gcTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                          <  1:2672922/101‑1 (MQ=25)


                                                                            cTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt                         <  1:3089224/101‑1 (MQ=21)


                                                                                tGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt                     <  1:3837973/101‑1 (MQ=21)


                                                                                 gcgcAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                    <  1:251102/101‑1 (MQ=25)


                                                                                  cgcAGGCAAAAGGGGGGGGCGG.CCCCCCCCTTTGGC.CTT.C.GGCCAATTACCCCCCCCGGGGT.TTTGG.GGAAGAAGAAAAAACAAGGGGTT.ATCTTTCCTCa                   >  2:1067304/1‑101 (MQ=255)


                                                                                  cgcAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa                   <  1:925952/101‑1 (MQ=25)


                                                                                    cAGGCAAAAGGGGGGGGCCG.CCCCCCCC.TTTGCCCTT.G.GGCCAATT.ACCCCCCCG.GGGATTTTGGGGAAAATGAAAA.ACCATGGGTTTATCTTTCCTCaaa                 >  2:2451290/1‑101 (MQ=255)


                                                                                    cAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                 <  2:1433926/101‑1 (MQ=25)


                                                                                     ccccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGCGAAAGGA..TGGGGTTTATCTTGCCCCAAata               >  2:723395/6‑101 (MQ=9)


                                                                                      ggCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata               <  1:210318/101‑1 (MQ=21)


                                                                                      cccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGACATTTGCGGCAAGGTGAAAGGA..TGGGGCTTATCTTGCCCCAAatat              >  2:1809181/5‑101 (MQ=9)


                                                                                       gCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat              <  2:3949620/101‑1 (MQ=25)


                                                                                       gCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat              <  2:1115952/101‑1 (MQ=25)


                                                                                        cAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc             >  2:3948178/1‑101 (MQ=21)


                                                                                        cAAAAGGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc             <  1:4044003/101‑1 (MQ=25)


                                                                                         gaaaAGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc           <  2:2171381/100‑1 (MQ=17)


                                                                                          aaaGGGGGGAGCTG.CCCCCCTC.TTGGC.CTT.T.GGCCAATT.CACCCCCCGCGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATacc           >  2:551273/1‑101 (MQ=18)


                                                                                          aaaAGGGGGCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCg          >  1:131524/1‑101 (MQ=17)


                                                                                            aagggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg        >  2:1863998/3‑101 (MQ=18)


                                                                                             ggggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg        >  1:1356940/1‑101 (MQ=21)


                                                                                             ggggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg        <  2:211406/101‑1 (MQ=25)


                                                                                             ggggggCCCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg        <  2:2338473/101‑1 (MQ=25)


                                                                                             agggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg       >  2:4098878/2‑101 (MQ=18)


                                                                                             agggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg       >  1:529732/2‑101 (MQ=18)


                                                                                              gggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg      <  1:1490286/101‑1 (MQ=18)


                                                                                              gggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg      >  2:1643891/1‑101 (MQ=18)


                                                                                              gggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg       <  2:1443836/101‑1 (MQ=25)


                                                                                               ggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg     >  2:4027452/1‑101 (MQ=18)


                                                                                               ggggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg     >  2:2878552/1‑101 (MQ=18)


                                                                                                gggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCgggggtg    >  1:4120356/1‑99 (MQ=18)


                                                                                                gggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg     <  1:3920565/101‑1 (MQ=25)


                                                                                                 ggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga   <  1:439035/101‑4 (MQ=21)


                                                                                                 ggCGCTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa    <  2:2075963/101‑1 (MQ=25)


                                                                                                  gcgcTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag  <  2:3270389/101‑5 (MQ=21)


                                                                                                  gcgcTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAg   <  2:3909766/101‑1 (MQ=25)


                                                                                                   cgcTG.CCCCCCTC.TTGGC.CTT.C.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGt  <  2:3468420/101‑1 (MQ=25)


GCGGCTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG..CTT.C.GGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGT  >  NC_014034/2640045‑2640244

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG