New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396771 =143 (1.010)31 (0.220) 3/134 25.2 0.18 coding (653/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1434846 133 (0.630)intergenic (‑625/‑333) RCAP_rcc01334/RCAP_rcc01335 hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 182 total aligned reads displayed.

GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCC  >  NC_014034/1434746‑1434944
                                                                                                    |                                                                                                  
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                                                    <  1:2368142/101‑1 (MQ=11)
   gCTCCCCCCGGGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGTTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGa                                                                                                 <  1:3847700/101‑1 (MQ=12)
   gCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGa                                                                                                 <  2:2983896/101‑1 (MQ=32)
    cTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGaa                                                                                                <  2:3701665/101‑1 (MQ=33)
      ccccccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGaaaa                                                                                              <  2:541261/101‑1 (MQ=35)
       cccccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAAc                                                                                             <  2:2217794/101‑1 (MQ=37)
         cccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCNCGGTGGCGTGGATCGAAACATGGAAAACcg                                                                                           >  1:2628246/1‑101 (MQ=255)
          ccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACcgc                                                                                          >  2:1514911/1‑101 (MQ=40)
            gcgGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCgg                                                                                        >  2:2993527/1‑101 (MQ=255)
              gggggCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCt                                                                                      >  2:3968972/1‑101 (MQ=255)
                gggCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTc                                                                                    <  1:4011724/101‑1 (MQ=255)
                 ggCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCa                                                                                   >  2:126941/1‑101 (MQ=255)
                   cGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCAcc                                                                                 <  2:2315684/101‑1 (MQ=255)
                    gTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACcg                                                                                <  1:1485023/101‑1 (MQ=255)
                       gATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACcgcgc                                                                             <  2:4139129/101‑1 (MQ=255)
                         tCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCgg                                                                           <  1:1304427/101‑1 (MQ=255)
                         tCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCgg                                                                           >  1:3326077/1‑101 (MQ=255)
                          cGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCggg                                                                          >  2:3925608/1‑101 (MQ=255)
                          cGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCATGTCGCTCCGCCCGCGGGGGCGGGTCTCGATACATGGAAAACCCCGGATTCACcgcggtgg                                                                          >  2:3477848/1‑97 (MQ=17)
                              acgacgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTg                                                                      >  1:3151396/1‑101 (MQ=255)
                               cgacgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTgg                                                                     <  1:424841/101‑1 (MQ=255)
                               cgacgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTgg                                                                     >  2:661115/1‑101 (MQ=255)
                                gacgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTggg                                                                    <  1:4110187/101‑1 (MQ=255)
                                gacgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTggg                                                                    >  2:2591796/1‑101 (MQ=255)
                                 acgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGt                                                                   >  2:3153305/1‑101 (MQ=255)
                                 acgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGt                                                                   <  1:1263338/101‑1 (MQ=255)
                                  cgcgCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCTCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTc                                                                  <  1:1053879/101‑1 (MQ=255)
                                     gcTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCt                                                               >  2:2508242/1‑101 (MQ=255)
                                      cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTc                                                              >  1:3286951/1‑101 (MQ=255)
                                       tGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcc                                                             >  2:1927957/1‑101 (MQ=255)
                                       tGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcc                                                             >  2:82685/1‑101 (MQ=255)
                                          aggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTccccc                                                          <  2:3613638/101‑1 (MQ=255)
                                           ggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcccccc                                                         >  2:2409367/1‑101 (MQ=255)
                                             aggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGGCGCTCCCCCcgc                                                       >  1:2523305/1‑101 (MQ=255)
                                              gggTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCcgcg                                                      <  1:1397674/101‑1 (MQ=255)
                                                   aTCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCCCCGCGCGGGATTGGGTCGCTCCCCCCCCgggggg                                                 >  1:3544132/1‑100 (MQ=255)
                                                   aTCTCGGTGGCGCCTTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGc                                                 <  1:2138336/101‑1 (MQ=255)
                                                    tctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCg                                                >  2:1085883/1‑101 (MQ=255)
                                                    tctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCg                                                >  1:2183065/1‑101 (MQ=255)
                                                    tctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCg                                                <  2:887206/101‑1 (MQ=255)
                                                    tctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCCCGGGGGCg                                                >  1:3672347/1‑101 (MQ=255)
                                                    tcgcGGTGGCGCCTTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCgggtact                                                <  2:3653381/98‑5 (MQ=255)
                                                     ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCgg                                               >  2:3519064/1‑100 (MQ=255)
                                                     ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGt                                               <  1:1915094/101‑1 (MQ=255)
                                                     cccGGTGGCGCCTTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGt                                               <  2:2894104/99‑1 (MQ=255)
                                                      tcGGTGGCGCCTTGTAGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCCCGGGGGCGTg                                              >  2:1432717/1‑101 (MQ=255)
                                                       cGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTgg                                             >  2:339842/1‑101 (MQ=255)
                                                        ggTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                            >  2:1711625/1‑101 (MQ=255)
                                                        ccgatctccTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                            <  1:3187177/94‑1 (MQ=255)
                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGTCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                           >  1:2836894/1‑101 (MQ=255)
                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                           <  1:3925868/101‑1 (MQ=255)
                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCCCGGGGGCGTGGAt                                           >  1:1240278/1‑101 (MQ=255)
                                                         gTGGCGCCTTGTCGCCCCCCCCGCGGGGGCGTGGATCAAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                           <  1:3377255/101‑1 (MQ=255)
                                                          tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                          <  2:2951295/101‑1 (MQ=255)
                                                           ggCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                         >  1:533184/1‑101 (MQ=255)
                                                           ggCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                         >  2:1637197/1‑101 (MQ=255)
                                                              gcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                      >  1:3263603/1‑101 (MQ=255)
                                                                cTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                    >  2:2150402/1‑101 (MQ=255)
                                                                 ttGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCg                                   >  1:1674727/1‑101 (MQ=255)
                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                 >  2:181191/1‑101 (MQ=255)
                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                 >  2:2166680/1‑101 (MQ=255)
                                                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                >  1:3484136/1‑101 (MQ=255)
                                                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                >  1:2736187/1‑101 (MQ=255)
                                                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                <  2:2628054/101‑1 (MQ=255)
                                                                       cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                             >  2:1484671/1‑101 (MQ=255)
                                                                       cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                             <  1:1557763/101‑1 (MQ=255)
                                                                        tCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCg                            >  2:629346/1‑101 (MQ=255)
                                                                         ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                           <  1:1782446/101‑1 (MQ=255)
                                                                           ccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGc                         <  1:884782/101‑1 (MQ=255)
                                                                            cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                        >  1:758858/1‑101 (MQ=255)
                                                                              cgcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                      >  2:1978122/1‑101 (MQ=255)
                                                                              cgcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                      <  1:495726/101‑1 (MQ=255)
                                                                              cgcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                      >  2:2473069/1‑101 (MQ=255)
                                                                               gcgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGa                     >  1:828924/1‑101 (MQ=255)
                                                                                 gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                   >  2:3230867/1‑101 (MQ=255)
                                                                                 gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                   >  1:1297780/1‑101 (MQ=255)
                                                                                  ggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATcc                  <  1:2987348/101‑1 (MQ=255)
                                                                                   gggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                 <  2:142253/101‑1 (MQ=255)
                                                                                   gggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                 <  1:1149320/101‑1 (MQ=255)
                                                                                    ggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCAt                <  1:1890303/101‑1 (MQ=255)
                                                                                     gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc               >  2:1567644/1‑101 (MQ=255)
                                                                                     gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc               <  1:2507955/101‑1 (MQ=255)
                                                                                      cGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg              >  2:647551/1‑101 (MQ=255)
                                                                                      cGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg              <  2:34967/101‑1 (MQ=255)
                                                                                       ggggATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCgg             <  2:1273923/99‑1 (MQ=255)
                                                                                       gTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCgg             >  2:3443752/1‑101 (MQ=255)
                                                                                       gTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCgg             >  2:74045/1‑101 (MQ=255)
                                                                                        tGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg            >  2:952343/1‑101 (MQ=255)
                                                                                         ggATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGt           >  2:3333773/1‑101 (MQ=255)
                                                                                         ggATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGt           >  1:1033138/1‑101 (MQ=255)
                                                                                          gATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt          >  2:2052819/1‑101 (MQ=255)
                                                                                            tCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGGTTc        >  2:37930/1‑101 (MQ=255)
                                                                                             cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg       >  1:3893325/1‑101 (MQ=255)
                                                                                              gAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgc      >  2:3515293/1‑101 (MQ=255)
                                                                                              gAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAACGTGATGCGTGCCCGATCCATCGGGTTTcgc      >  2:1329363/1‑101 (MQ=255)
                                                                                               aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg     >  2:4216653/1‑101 (MQ=255)
                                                                                               aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg     >  2:2279587/1‑101 (MQ=255)
                                                                                                 aCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGc   >  1:4156429/1‑101 (MQ=255)
                                                                                                  cATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc  >  1:2186050/1‑101 (MQ=255)
                                                                                                  cATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc  <  1:1515015/101‑1 (MQ=255)
                                                                                                    |                                                                                                  
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCC  >  NC_014034/1434746‑1434944

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG