New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 233017542 (0.200)28 (0.130) 3/196 31.3 0.26 intergenic (+150/+162) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
?NC_014034 = 2341510 119 (0.560)intergenic (‑61/+9) purQ/purS phosphoribosylformylglycinamidine synthase subunit PurQ/phosphoribosylformylglycinamidine synthase subunit PurS
Rejected: Position hash score below cutoff.

Only 100 of 131 total aligned reads displayed.

CGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCCGGT  >  NC_014034/2341410‑2341610
                                                                                                         |                                                                                                    
tgCATTTCGGTCCCGGAAAGGTGATGACGGCTGTTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.c                                                                                                      <  2:593126/100‑1 (MQ=37)
cGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.c                                                                                                      <  1:410929/101‑1 (MQ=255)
cGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.c                                                                                                      <  1:2282247/101‑1 (MQ=255)
 gCAGTTCGCCCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     <  2:2173250/101‑1 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     >  1:305940/1‑101 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     <  2:3374463/101‑1 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     >  1:1575912/1‑101 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     <  1:1058517/101‑1 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     >  2:3964947/1‑101 (MQ=255)
 gCAGTTCGACCCCGGAAAGGTGATGACGGCGGCCTTCGTCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGccc.cc                                                                                                     <  1:3613093/101‑1 (MQ=255)
  cAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCg                                                                                                    >  1:1717829/1‑101 (MQ=255)
  cAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGCCCGGGGG.CAGCGCCC.CCg                                                                                                    >  1:1592032/1‑101 (MQ=255)
   aGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCgg                                                                                                   >  1:471925/1‑101 (MQ=255)
    gTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGgc                                                                                                  >  2:2592582/1‑101 (MQ=255)
     ttCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGgcg                                                                                                 <  2:1209592/101‑1 (MQ=255)
       cGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGcc                                                                                               >  1:1000821/1‑101 (MQ=255)
         aCCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGcccc                                                                                             >  1:4113121/1‑100 (MQ=255)
           ccgggAAAGGTGATGAGGGCGGCTTTCAGCGCGAAAGGC.CTCTTG.TTTTTTCTGGGCTC.AAATCCGCGGGGGGTCGGGGGG.CCGCCCCC.CCGGCGCCCTca                                                                                           <  2:3718794/98‑1 (MQ=255)
             cGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGCGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTcagc                                                                                         >  1:544014/1‑101 (MQ=255)
              ggAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTcagca                                                                                        >  2:3542881/1‑101 (MQ=255)
                aaaGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGa                                                                                      >  1:3991603/1‑101 (MQ=255)
                 aaGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGAt                                                                                     >  1:555444/1‑101 (MQ=255)
                 aaGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGAt                                                                                     >  1:896765/1‑101 (MQ=255)
                 aaGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGAt                                                                                     >  2:3018472/1‑101 (MQ=255)
                     ggagggcgggggTTTTCACCGCGAAGGGG.CTCCTT.TTTTTTTTGGGCTA.AAATCCGCGGGGGGCCGGGGGG.CAGCCCCC.CCGGCGCCCTCAGCAGATCTCg                                                                                 <  1:2549210/95‑1 (MQ=255)
                      gatgaCGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGa                                                                                >  2:1136268/1‑101 (MQ=255)
                      gatgaCGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGa                                                                                >  2:1358150/1‑101 (MQ=255)
                           cggcggCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGgtg                                                                           >  1:3680360/1‑101 (MQ=255)
                            ggcggcTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGgtgt                                                                          >  2:497119/1‑101 (MQ=255)
                               cggtttccatgcgAAAGGGCCCCCTT.CTTTTTTTGGGCTA.AAATCCGCGGGGGGTCGGGGGC.CGCCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTAt                                                                        <  2:4149146/91‑1 (MQ=255)
                                gcTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTAttt                                                                      >  1:1099484/1‑101 (MQ=255)
                                  tttCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTtct                                                                    <  2:1325564/101‑1 (MQ=255)
                                   tttagcgcgAAAGGT.GTTCTGTCTTTTGCGTGGCTC.AAGCCCGCCGGGGGTCCGGGGC.CCCCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTtct                                                                    <  2:3332328/96‑1 (MQ=255)
                                   ttCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTtctc                                                                   >  2:1787403/1‑101 (MQ=255)
                                    tcacggcgAAGGGG.CTCCT..TTTTTTTTTGGCCCAAAATCCGCGGGGGGCCGGGGGG.CGGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCg                                                                  <  1:3468107/96‑1 (MQ=255)
                                    tCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCg                                                                  >  2:4765/1‑101 (MQ=255)
                                      aTCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGAt                                                                >  2:3770732/1‑101 (MQ=255)
                                      aTCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGAt                                                                >  2:3818125/1‑101 (MQ=255)
                                       tCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATc                                                               >  1:3426054/1‑101 (MQ=255)
                                         gggAAAGGG.CTCCTG.CTTTTTCTTGCCTA.AAATCCGCGGGGGGTCGGGGGG.CAGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCAc                                                             <  1:2027956/99‑1 (MQ=255)
                                          cgAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACg                                                            >  1:2064223/1‑101 (MQ=255)
                                           gAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACgg                                                           >  1:3516041/1‑101 (MQ=255)
                                            aaaGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGt                                                          >  1:2701810/1‑101 (MQ=255)
                                              aGGG.CNNCTG.TTTTTTCTTGGCCC.AAATCCGCCGGGGGTCGGGGGG.CAGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTAt                                                        <  1:2023502/101‑1 (MQ=37)
                                                    tCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCg                                                   <  2:730025/101‑1 (MQ=255)
                                                     tctcccTTTTTGTTGGCAC.AAACGGGGGGGGGGTGCGGGGG.CCCCCCCCGCTGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGc                                                    <  1:4185660/96‑1 (MQ=255)
                                                     ccgttttttttCTTGTCAA.AAACGCGCGGGGGGTGGGGGGG.CGGCGCCC.GCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCg                                                   <  2:3030372/95‑1 (MQ=255)
                                                       tG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCgaga                                                >  2:579559/1‑101 (MQ=255)
                                                        g.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGaa                                               <  2:2527605/101‑1 (MQ=255)
                                                         tttttttTTTGCCAC.AAATCCCCGGGGGGCCGGGGGG.CCGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGaa                                               <  1:3819233/99‑1 (MQ=255)
                                                          cTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGTTGTATTTCTCGATCACGGTATTGGCGAGAAg                                              >  1:2758912/1‑101 (MQ=255)
                                                               ttttGGCTC.AAACCCGCCGGGGGCCGGGGGG.CACCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtct                                         <  1:1115843/99‑1 (MQ=255)
                                                               tCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtct                                         >  1:287862/1‑101 (MQ=255)
                                                               tCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtct                                         >  1:363060/1‑101 (MQ=255)
                                                                cTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTtctc                                        >  2:2193904/1‑101 (MQ=255)
                                                                  tgtcTC.AAATACCGCGGGGGTCGGGGGC.CCCCCCCC.CGGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGc                                      <  2:3515788/98‑1 (MQ=255)
                                                                   ggCTC.AAATACGCCGAGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGca                                     >  1:3568168/1‑101 (MQ=255)
                                                                    gCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGcca                                    >  2:1167980/1‑99 (MQ=255)
                                                                    gCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGcac                                    >  1:1584778/1‑101 (MQ=255)
                                                                    gCTA.AAACACGCGGGGGGCCGGGGGG.CGGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGcac                                    <  2:3847232/101‑1 (MQ=255)
                                                                      tC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACAt                                  <  2:1400072/101‑1 (MQ=255)
                                                                      tC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCATGATCACGGTATTGGCGAGAAGTTTCTCGCACAt                                  >  1:3630912/1‑101 (MQ=255)
                                                                          aagcccgggggggGCCGGGGGCCCCCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCg                                <  1:3257844/93‑1 (MQ=255)
                                                                          aaTACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGc                               >  1:3825423/1‑101 (MQ=255)
                                                                           aTACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGcc                              >  2:2359471/1‑101 (MQ=255)
                                                                            tACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCt                             >  1:4086147/1‑101 (MQ=255)
                                                                             aCGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCtt                            <  2:4191590/101‑1 (MQ=255)
                                                                              cGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTg                           >  2:4044488/1‑101 (MQ=255)
                                                                               gCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGa                          >  1:2647540/1‑101 (MQ=255)
                                                                               gCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGa                          >  2:1266993/1‑101 (MQ=255)
                                                                                 cGGGGGTCCGGGGG.CAGCGCCC.TCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACt                        >  2:3858690/1‑101 (MQ=255)
                                                                                  gggggTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACtt                       >  1:2566159/1‑101 (MQ=255)
                                                                                   ggggTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTc                      <  2:305895/101‑1 (MQ=255)
                                                                                    gggccgggggg.CACCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCg                     <  2:3953885/95‑1 (MQ=255)
                                                                                    gggTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCg                     >  1:4033263/1‑101 (MQ=255)
                                                                                    gggTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCg                     >  1:2576979/1‑101 (MQ=255)
                                                                                     ggccgggggg.CGGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCgg                    <  1:4004652/96‑1 (MQ=255)
                                                                                      gTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGt                   >  1:795843/1‑101 (MQ=255)
                                                                                       tCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGtt                  >  2:2804757/1‑101 (MQ=255)
                                                                                        ggggggg.CCGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGttt                 <  2:1491759/99‑1 (MQ=255)
                                                                                        ccGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGttt                 <  2:363009/101‑1 (MQ=255)
                                                                                         gggggg.CGGCCCCC.CGGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc                <  1:1858473/100‑1 (MQ=255)
                                                                                         cGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGtaga                >  1:468105/1‑98 (MQ=255)
                                                                                         cGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc                >  1:2010124/1‑101 (MQ=255)
                                                                                         cGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc                >  1:3140506/1‑101 (MQ=255)
                                                                                         cGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc                >  1:3234678/1‑101 (MQ=255)
                                                                                         cGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTc                >  2:1045581/1‑101 (MQ=255)
                                                                                            ggg.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTccgc             >  1:2688425/1‑101 (MQ=255)
                                                                                            cgg.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGGGTATTTCTCGATCACGGTATCGGCGAGAAGTTTCTCGCAAATCGCCCTGACCTCGGTTTccgc             >  2:283549/2‑101 (MQ=255)
                                                                                                cAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCcgccgc          >  2:3179989/1‑101 (MQ=255)
                                                                                                cAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCcgccgc          >  2:2917522/1‑101 (MQ=255)
                                                                                                cAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCcgccgc          >  1:3949588/1‑101 (MQ=255)
                                                                                                cAGCCCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCcgccgc          <  2:2560750/101‑1 (MQ=255)
                                                                                                 aGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCa         >  1:983172/1‑101 (MQ=255)
                                                                                                     ccc.ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGccc     >  1:1477149/1‑101 (MQ=255)
                                                                                                      cc.ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCcg    <  1:2353991/101‑1 (MQ=255)
                                                                                                       c.ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCcgg   >  2:1495339/1‑101 (MQ=255)
                                                                                                       c.ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCcgg   <  2:50673/101‑1 (MQ=255)
                                                                                                         ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCcggt  >  2:2711502/1‑101 (MQ=255)
                                                                                                         ccGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCcggt  >  1:2247829/1‑101 (MQ=255)
                                                                                                         |                                                                                                    
CGCAGTTCGACCCCGGAAAGGTGATGACGGCGGCTTTCATCGCGAAAGGG.CTCCTG.CTTTTTCTTGGCTC.AAATACGCCGGGGGTCCGGGGG.CAGCGCCC.CCGGCGCCCTCAGCAGATCTCGACGGTGTATTTCTCGATCACGGTATTGGCGAGAAGTTTCTCGCACATCGCCTTGACTTCGGTTTCCGCCGCAGCCCGGT  >  NC_014034/2341410‑2341610

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG