New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 79907898 (0.530)42 (0.230) 16/174 19.6 0.32 intergenic (+109/‑19) sucB/lpdA1 dihydrolipoyllysine‑residue succinyltransferase/dihydrolipoyl dehydrogenase
?NC_014034 1640019 = 77 (0.360)intergenic (+99/‑46) mccB/mccA methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 126 total aligned reads displayed.

ATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGG.....G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639927‑1640119
                                                                                                                     |                                                                                                    
    cTCGGGCGGGTTTTTTG.GGGCC.AAGAT.AAA.CCCACCCCTTT.TCTTCTGCCCCAAATTCCCCGGGGGGGCGGG..GGGG.....G.....CGGCC..C..CCCCCGCCACTTCCGCCa                                                                                              <  2:1802052/101‑1 (MQ=255)
     ccggggggggGTATTTGGGGGA.AAGAAAAAC.CCCCCCCCTTT.CACCCTGCCCCAAATTCCCCGGGGGGCC..G..GGGG.....GGC...CGCCC..C..CCCCCGCCACTTCCGcc                                                                                               <  2:1296645/95‑1 (MQ=255)
        ggcggGGATATTT.TGGGC.AAGATGAAA.ACCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..CCGGGGGCA...G.....CG.....C..CCCCCCCCCCTTCCGCCACggg                                                                                          >  2:1750600/1‑101 (MQ=18)
          cggGGATATTT.GGGGC.AAGATGAAA.CCGATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGc                                                                                        >  2:1271544/1‑101 (MQ=21)
           ggggATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGNA.G.....CN.....C..CCCCCGCCACTTCCGCCACGGGGCa                                                                                       >  1:4222481/1‑101 (MQ=21)
           ggggATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCa                                                                                       >  1:1193964/1‑101 (MQ=25)
           ggggATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCa                                                                                       >  1:4156993/1‑101 (MQ=25)
            gggaatttt.GGGGA.AAAAATAAACCCCACCCTTTT.CATCTTCCCCAAAATA.CCCGGGGGGCC..C..GGGG.....GGC...CGCCC..C..CCCCCGCCACTTCCGCCACGGGGCa                                                                                       <  2:2504854/95‑1 (MQ=2)
             ggATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAgc                                                                                     >  1:2318810/1‑101 (MQ=21)
              gATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCAccgatctgaa                                                                                    >  2:2711613/1‑92 (MQ=18)
               atatTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCAGCCACGGGGCAgcgc                                                                                   >  2:818114/1‑101 (MQ=21)
               atatTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGG.....GGC...CG.....CGACCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                                   >  2:1038688/1‑101 (MQ=21)
                    tgggggC.AAAATG.AA.CCCCCCCCCTT.CCTCTTTCCCCAAAATCCCCGGGGGGCC..C..GGGGGGCCAG.....CC.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               <  1:3482028/99‑1 (MQ=255)
                    t.GGGGCAAAGATAAAC.CCCCCCCCTTT.CTTCTTCCCCAAAATATCCGGGGGGCCC..G..GGGG.....GCC...CGCC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               <  2:2856948/101‑1 (MQ=9)
                    t.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              >  1:729171/1‑101 (MQ=25)
                    t.GGGGC.AAAGAGAAA.CCCCCCCCTTTCCCTCTTCCCCCAAATA.CCCGGGGGGCC..C..GGGGGGGCAG.....CC.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               <  2:1223608/101‑1 (MQ=255)
                     tgggcgaaaGATAAAC.CCCACCCCTTT.CATCTCGCCCAAAATA.CCCGGGGGGCC..CGGGGGG.....G.....CGGCC..C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               <  2:1207293/94‑1 (MQ=12)
                     gggggA.AAGATAAAC.CCCACCCTTTT.CATCTGCCCCAAAAGACCGGGGGGGGCG..G..GGGG.....GGCCC.CC.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              <  2:3308683/100‑1 (MQ=255)
                      ggggC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                             >  1:979752/1‑101 (MQ=25)
                      ggggC.AAAAAAAAA.CCCCCCCCTTT.TCTCCTGCCCCAAAATCCCCGGGGGGCC..CGGGGGG.....G.....CGCCC..C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              <  1:2500847/101‑1 (MQ=255)
                          c.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                         >  1:3197070/1‑101 (MQ=25)
                          c.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                         >  1:3714772/1‑101 (MQ=21)
                            aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGTCAGCGCCCCGGCCGTTg                                                                        >  2:3801608/1‑101 (MQ=21)
                            aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                        >  2:3148872/1‑101 (MQ=25)
                            aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                        >  2:476050/1‑101 (MQ=25)
                            aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                        >  1:3512785/1‑101 (MQ=25)
                             aGATGAAA.CCCATCCCTTT.CATCTTTCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  1:696071/1‑101 (MQ=21)
                              gATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                      >  2:2111578/1‑101 (MQ=21)
                                tGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                    >  1:229503/1‑101 (MQ=25)
                                tGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                    >  1:1327950/1‑101 (MQ=25)
                                 gAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   >  1:2494886/1‑101 (MQ=25)
                                 gAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   >  2:105336/1‑101 (MQ=25)
                                   aa.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                                 >  1:96620/1‑101 (MQ=25)
                                      cccATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                                               >  1:4188376/1‑101 (MQ=25)
                                        cATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                             >  2:1430903/1‑101 (MQ=25)
                                         cccctttt.CCTCTTCCCCCAAATCCCCGGGGGGGCC..G..GGGG.....GCCCC.CC.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                            <  1:1254920/96‑1 (MQ=255)
                                         aTCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                            >  1:1408632/1‑101 (MQ=25)
                                          tCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                           >  1:2684234/1‑101 (MQ=25)
                                          ccccTTT.CCCCCTCCCCAAAATCTCCCGGGGGGCC..C..GGGG.....GGGCCCCC.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                            <  1:218398/100‑1 (MQ=255)
                                            ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                         >  2:4164487/1‑101 (MQ=25)
                                             cTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                                        >  1:2484647/1‑101 (MQ=25)
                                              ttt.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                       >  1:2824194/1‑101 (MQ=25)
                                               tt.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                      >  2:3563178/1‑101 (MQ=25)
                                               tt.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                      >  1:1091080/1‑101 (MQ=25)
                                                t.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  1:15707/1‑101 (MQ=25)
                                                t.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  1:2241139/1‑101 (MQ=25)
                                                t.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  1:1838639/1‑101 (MQ=25)
                                                  tccccccccccAAAATTCCGGGGGGGCC..C..GGGG.....GGCC..CGCC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     <  1:2660119/94‑1 (MQ=255)
                                                  cATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                    >  2:1814031/1‑101 (MQ=25)
                                                  cATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                    >  2:1963307/1‑101 (MQ=25)
                                                  cATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                    >  1:204490/1‑101 (MQ=25)
                                                    tCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                                  >  2:3738016/1‑101 (MQ=25)
                                                    tCTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                                  >  2:4220085/1‑101 (MQ=25)
                                                    ctcccccccAAATCCCCGGGGGGGCC..C..GGGG.....G.....GGCCCCCC..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                                   <  1:2248123/96‑1 (MQ=255)
                                                     cTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCTCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                                 >  1:3643864/1‑101 (MQ=25)
                                                     cTTGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGAGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                                 >  2:1398167/1‑101 (MQ=25)
                                                       tGCCCCAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGCAGACCGCGATGTTTCaaa                                               >  1:4015837/1‑101 (MQ=25)
                                                         ccccAAATATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                                             >  2:1861649/1‑101 (MQ=25)
                                                             aaaTATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                                         >  2:3708778/1‑101 (MQ=25)
                                                              aaTATCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                        >  1:2303192/1‑101 (MQ=25)
                                                               atatCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  2:47642/1‑101 (MQ=37)
                                                               atatCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  1:2178667/1‑101 (MQ=37)
                                                                 atCCCGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                     >  2:2341522/1‑101 (MQ=37)
                                                                   nccGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCNGATcn                                   >  1:963020/2‑100 (MQ=37)
                                                                    ccGGGGGGCC..C..GGGGGGCA.G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCNGTTGACGAAGGNGACCGCGATGTNTCAAAAGATCCTGATCGc                                  >  1:247721/1‑101 (MQ=37)
                                                                                  ccggggggcag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc                         >  1:3313296/11‑101 (MQ=255)
                                                                                   cggggggcag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                        >  2:1975314/10‑101 (MQ=255)
                                                                                    ggggggcag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGGCg                       >  2:3565146/9‑101 (MQ=255)
                                                                                    ggggggcag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  2:4049892/9‑101 (MQ=255)
                                                                                       gggcag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                    >  2:2053851/6‑101 (MQ=255)
                                                                                          cag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg                 >  2:306223/3‑101 (MQ=255)
                                                                                           ag.....cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc                >  2:4070547/2‑101 (MQ=255)
                                                                                                  gccgcccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt                   <  2:1066186/94‑1 (MQ=255)
                                                                                                  cg.....c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAAGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGcgt              >  2:4206610/1‑99 (MQ=255)
                                                                                                   ccccccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc                  <  2:2601584/95‑1 (MQ=255)
                                                                                                    cacccc..cccccGCCTCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg                 <  2:3469544/96‑1 (MQ=255)
                                                                                                        cc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGACACCGCGATGTTTCAAAAGATCCTGATCTCCAACAGGGCCGAGATCGCCTg             <  2:4156731/100‑1 (MQ=255)
                                                                                                         c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt            <  2:3512532/101‑1 (MQ=255)
                                                                                                         c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt            >  1:1538952/1‑101 (MQ=255)
                                                                                                         c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt            <  1:926952/101‑1 (MQ=255)
                                                                                                          cctccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg             <  2:1808538/98‑1 (MQ=255)
                                                                                                            cccccGCCCCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCAAGATCGCCTGTc           <  1:2289064/101‑1 (MQ=255)
                                                                                                            cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc           >  1:3576583/1‑101 (MQ=255)
                                                                                                            cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc           <  2:66469/101‑1 (MQ=255)
                                                                                                             ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTgaga          >  1:1808657/1‑98 (MQ=255)
                                                                                                               ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg        >  1:3986817/1‑101 (MQ=255)
                                                                                                               ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg        >  1:3484892/1‑101 (MQ=255)
                                                                                                                cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt       <  1:1123505/101‑1 (MQ=255)
                                                                                                                  ccccTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGa     <  1:3529668/98‑1 (MQ=255)
                                                                                                                  ccACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGa     >  1:4131058/1‑101 (MQ=255)
                                                                                                                  ccACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGa     >  1:4052273/1‑101 (MQ=255)
                                                                                                                  ccACTCCCGCCGCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGa     <  1:818195/101‑1 (MQ=255)
                                                                                                                   cgcTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGTGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGCGCGCCTGTCGGGGGAt    >  2:53134/3‑101 (MQ=255)
                                                                                                                   cACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGAt    >  2:1625645/1‑101 (MQ=255)
                                                                                                                    ccTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   <  2:1121978/100‑1 (MQ=255)
                                                                                                                    ccTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   <  2:2552882/100‑1 (MQ=255)
                                                                                                                    ccTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   <  2:1786453/100‑1 (MQ=255)
                                                                                                                    aCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   <  2:191425/101‑1 (MQ=255)
                                                                                                                     cTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCg  <  2:3694126/101‑1 (MQ=255)
                                                                                                                     cTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCg  <  1:196262/101‑1 (MQ=255)
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ATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC..C..GGGG.....G.....CG.....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639927‑1640119

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG