New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1699978 =63 (0.440)5 (0.040) 2/120 28.8 0.08 coding (1459/1467 nt) purF amidophosphoribosyltransferase
?NC_014034 = 2995646 46 (0.190)intergenic (+186/+34) RCAP_rcc02802/RCAP_rcc02803 membrane dipeptidase/hypothetical protein
Rejected: Position hash score below cutoff.

CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATG.A...............................................  <  NC_014034/1700045‑1699978
.............................................................................................................CCGCGGG  <  NC_014034/2995646‑2995640
                                                                     ||||||||||||||||||||||||||||||||||||||||       
CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGC                 <  1:767727/101‑1 (MQ=0)
 GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCC                <  1:4472076/101‑1 (MQ=0)
 GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCC                <  1:761438/101‑1 (MQ=0)
 GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCC                <  2:2100789/101‑1 (MQ=0)
  ACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCG               <  2:3996622/101‑1 (MQ=0)
    GCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAG             <  1:1782454/101‑1 (MQ=0)
     CCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGG            <  2:2567426/101‑1 (MQ=0)
       TGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCG          <  2:1153614/101‑1 (MQ=0)
         TTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGAC        <  1:2412615/101‑1 (MQ=0)
         TTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGAC        >  2:4432783/1‑101 (MQ=0)
            CTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcg     <  1:2832272/101‑3 (MQ=0)
            CTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcg     <  2:4561554/101‑3 (MQ=0)
               GGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcgggc  >  1:361603/1‑96 (MQ=2)
                                                                     ||||||||||||||||||||||||||||||||||||||||       
CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATG.A...............................................  <  NC_014034/1700045‑1699978
.............................................................................................................CCGCGGG  <  NC_014034/2995646‑2995640

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG