New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2070640 =27 (0.110)3 (0.010) 2/198 38.6 0.09 intergenic (+55/+117) dcd/guaB deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
?NC_014034 2330295 = 37 (0.160)intergenic (+270/+42) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC.............  <  NC_014034/2070739‑2070640
....................................................................................................GGCCCCCGGCGGG  >  NC_014034/2330295‑2330307
                                                                                                                 
cgCAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCG              <  2:665709/99‑1 (MQ=1)
CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCG              >  1:4563517/1‑101 (MQ=1)
         CGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGC     >  1:628897/1‑101 (MQ=11)
          GGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGCCCGGGGGGCAGCGCCCCCCGGCG    >  1:568403/1‑101 (MQ=0)
            GGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGG  >  1:3742480/1‑101 (MQ=14)
                                                                                                                 
CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC.............  <  NC_014034/2070739‑2070640
....................................................................................................GGCCCCCGGCGGG  >  NC_014034/2330295‑2330307

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG