New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2070640 =	27 (0.110)	3 (0.010)	2/198	38.6	0.09	intergenic (+55/+117)	dcd/guaB	deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
	?	NC_014034	2330295 =	37 (0.160)					intergenic (+270/+42)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

GGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCC.GGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTTGTGA  >  NC_014034/2070544‑2070740                                                                                                   |                                                                                                       ggCCGGGGGCTGAAGCTCGCCAAGCATTTCCGCGTGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGCCGACCCGCCGGGGGGCGCTg                                                                                                     <  1:4224553/101‑1 (MQ=255)       gggCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCC.TGGGgcggggccggctc                                                                                              >  2:1172327/1‑91 (MQ=39)        ggcggacccccGCCAAGCGTTCCGGCGGGGGGGGGGGGG.CGCGGGGATGGTTTCCGCCGCGGTTTTCCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCg                                                                                            <  1:4372146/91‑1 (MQ=255)         gCTGAACCCCGCCAAGCTTTCCCGGGGGGGGGGGGGGG.CGCGGGGGTGGTTTCCCCCGCGGCTTTGCCGGCGGCCCCCCGCCGGGGGGCGCTG..CCCCCCgg                                                                                           <  1:3361404/101‑1 (MQ=255)         gCTAAAGCCCGCCAGGCATTCCCGGGGGGGGGGGGGGG.CGCGGGGATGTTTTCCGCCGCGTCTTTGCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCgg                                                                                           <  2:4527828/101‑1 (MQ=255)          gtGAGGCGCGCCCAGCCTTCCCGCGGGGGGTGGGGGGTCGGGGGGA.GTATTTCCCCGCGGTTTCGCGCGCGGAACCCCGCCGGGGGGCGCTG..CCCCCCGGa                                                                                          <  1:3091436/100‑1 (MQ=255)          gtGAAGCTCCCCAGGCTTTCCCGGGGGGGGGGGGGGG.CGCGGGGAGTGTTTCCGCCGCGTTTTTCCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCGGa                                                                                          <  1:2066940/100‑1 (MQ=255)           ggAAGCCCCCAAAGCTTTCCCGGGGGGGGGGGGGGG.CGCGGGGATGTTTTCCGCCGCGGTTTGCCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCGGAc                                                                                         <  1:468234/100‑1 (MQ=255)              ggccccccAGGCATTGGCGGGGGGGGTGGGGGG.CGGGGGGATGGTTTCCCCCGCGTCTTTCCCTGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCGGAcccc                                                                                      <  2:1480453/95‑1 (MQ=12)               gcgcGCCAAGCTTCGCCGCGCGGGGTGCGGCG.CGCGCGGTTGGTTTGCGCCGGGGCTTTCCCGGGGGCCCCCCGCCGGGGGGCGCTG..CCCCCCGGAccccc                                                                                     <  2:1503508/98‑1 (MQ=12)                cTCCCCAAGCGTTCCGGGGGGGGGGGGGGGG.CGCGGGGGTGGTTTCCGCCGCGGCTTTGCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCGGAcccccc                                                                                    <  2:1046899/101‑1 (MQ=16)                       aGCATTTCCGCGCGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGGGCG..CCCCCCCGAcacccccgtgtct                                                                             >  2:568355/1‑94 (MQ=25)                          aTTTCCGCGCGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCC.GGGGGGGGGGGCCCCCCCGGCCCCCCCgccgagatt                                                                           >  2:3044974/1‑93 (MQ=25)                                    ggggGGGGGGG.CGCGGGGGTGGTTTCCGCCCCGTTTTGGCCGGCGGCCCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATg                                                                <  2:3748582/101‑1 (MQ=9)                                          aGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGCGGTG..CCCCCCGGACCCCCCGGGGTATTTGTGGCAAGATGAGgggg                                                          >  2:1595805/1‑101 (MQ=37)                                                        gggtttccgccgcGGGTCTGCCTGGGGCCCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGc                                             <  2:4568925/94‑1 (MQ=18)                                                         gtttcccgccgcGGTTTGCCCGGCGCCCCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGcc                                            <  1:4497306/95‑1 (MQ=18)                                                              tCGCCGCGGTTTCGCCGGCGCCCCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTac                                       <  2:1227262/101‑1 (MQ=21)                                                               ccccccgGCTTTGCCGGCGGCGCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTaca                                      <  2:2643686/96‑1 (MQ=25)                                                                 ccgcGTCTTTCCCGGGGGCCCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTAcaca                                    <  2:3909367/101‑1 (MQ=21)                                                                    cgGCTGTGCCCGCGCCGCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGaa                                 <  1:3742455/101‑1 (MQ=25)                                                                            cgcgcggccCCCCGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGcc                         <  1:3525005/98‑1 (MQ=25)                                                                            ccggcgcccccccGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGcc                         <  1:3130026/91‑1 (MQ=25)                                                                                      cccGCCGGGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTccc               <  1:3742480/101‑1 (MQ=255)                                                                                        cgccggggggCGCTG..CCCCCCGGGCCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTccccc             <  1:568403/96‑1 (MQ=255)                                                                                         gccggggggCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCg            <  1:628897/97‑1 (MQ=255)                                                                                              ggggCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCt       <  1:3593245/101‑1 (MQ=255)                                                                                                ggCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTtg     >  1:2544461/1‑101 (MQ=255)                                                                                                 gcgcTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTtgt    <  2:2409475/101‑1 (MQ=255)                                                                                                  cgcTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTtgtg   <  1:4563517/101‑1 (MQ=255)                                                                                                  cgcTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTtgcg   >  2:665709/1‑99 (MQ=255)                                                                                                   gcTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTTGTGa  >  2:591629/1‑101 (MQ=255)                                                                                                   |                                                                                                       GGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGG.CGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCC.GGGGGCGCTG..CCCCCCGGACCCCCCGGGATATTTTCGGCAAGATGAAGGGGAAGCGGTGTTTGCCGGTACACAGAAAAAGGGCCGGGGTTTCCCCCGGCCCTTGTGA  >  NC_014034/2070544‑2070740 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG