New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2238830 =	NA (NA)	2 (0.010)	2/184	37.1	0.02	coding (200/1575 nt)	RCAP_rcc02072	nonfunctional major facilitator superfamily protein
	?	NC_014034	3034577 =	191 (0.800)					coding (535/2472 nt)	torA	trimethylamine‑N‑oxide reductase
Rejected: Position hash score below cutoff.

GCGGGGATCGACCAGCCCGGGTCCAGCTGCGTCAGCGCGACCAGCGCCGCGACCTGCAGGCCAAGCCCGCCGTAAAGCGTGGCGGCCAGGCCGAACCGCGCCGCCAGC....................................................................................................  <  NC_014034/2238929‑2238830 ....................................................................................................CCGCCAGCGTCAGCATCCGGCGCAGAAGCGTGGTGCAATTGTGCAGCCGCCCCGGGCTTTTCCAGCCATAGGAGCCGCCAAAGACGCCCTGCGGGCCGTAGGTCTCTT  >  NC_014034/3034577‑3034684                                                                                                                                                                                                                                                                                           tAAGCGTGGCGGCCAGGCCGAACCGCGCCGCCAGCGTCAGCATCCGGCGCAGAAGCGTGGTGCAATTGTGCAGCCGCCCCGGGCTTTTCCAGCCATAGGAG                                    <  1:1056292/100‑1 (MQ=255)                                                                           AAGCGTGGCGGCCAGGCCGAACCGCGCCGCCAGCGTCAGCATCCGGCGCAGAAGCGTGGTGCAATTGTGCAGCCGCCCCGGGCTTTTCCAGCCATAGGAGa                                   >  2:1056203/1‑100 (MQ=255)                                                                                                                                                                                                                  GCGGGGATCGACCAGCCCGGGTCCAGCTGCGTCAGCGCGACCAGCGCCGCGACCTGCAGGCCAAGCCCGCCGTAAAGCGTGGCGGCCAGGCCGAACCGCGCCGCCAGC....................................................................................................  <  NC_014034/2238929‑2238830 ....................................................................................................CCGCCAGCGTCAGCATCCGGCGCAGAAGCGTGGTGCAATTGTGCAGCCGCCCCGGGCTTTTCCAGCCATAGGAGCCGCCAAAGACGCCCTGCGGGCCGTAGGTCTCTT  >  NC_014034/3034577‑3034684 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG