New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2287727	0 (0.000)	16 (0.110)	6/126	25.3	0.21	intergenic (‑124/+111)	RCAP_rcc02125/acsA1	hypothetical protein/acetate‑‑CoA ligase
	?	NC_014034	= 2490469	119 (0.500)					intergenic (‑82/+10)	soxD/soxB	sarcosine oxidase subunit delta/sarcosine oxidase subunit beta
Rejected: Position hash score below cutoff.

TAGCGGCGGGGGTTTCACACCCCCGCACCCCCGTGG..........................................................................  >  NC_014034/2287692‑2287727 .........................................................................CCCTTTCATCTTGCCCGAAATATCCCGCGGGGGTCCG  <  NC_014034/2490469‑2490433                                     |||||||||||||||||||||||||||||||||||||                                      aAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGC           >  1:2992954/2‑101 (MQ=255) aAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGC           <  2:1529450/100‑1 (MQ=255) aAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGC           >  2:4470594/2‑101 (MQ=255)   gctGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGG         <  1:1943435/98‑1 (MQ=255)   gctGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGG         >  2:1156162/4‑101 (MQ=255)    ctGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGG        <  2:210184/99‑1 (MQ=255)    ctGCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGG        >  2:409235/3‑101 (MQ=255)     tGCGGGGGTTTCACACCCCCGCACCCCCGGGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGG       >  1:2904113/2‑101 (MQ=255)       CGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGT     <  1:1149110/101‑1 (MQ=255)       CGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGT     <  2:1030411/101‑1 (MQ=255)        GGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTg    <  2:2720527/101‑2 (MQ=255)        GGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTg    >  2:962397/1‑100 (MQ=255)         GGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTga   >  1:2204100/1‑99 (MQ=255)         GGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTga   <  1:3082768/101‑3 (MQ=255)         GGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTga   <  2:2779716/101‑3 (MQ=255)          GGGTTTCACACCCCCGCACCCCCGTGGGATATTTGAGGCAAGATGAAAGGAAAAGCCCCTCTTCCCGTTTCACCTTGCCCGAAATATCCCGCGGGGGTgaa  <  1:4470889/101‑4 (MQ=255)                                     |||||||||||||||||||||||||||||||||||||                                      TAGCGGCGGGGGTTTCACACCCCCGCACCCCCGTGG..........................................................................  >  NC_014034/2287692‑2287727 .........................................................................CCCTTTCATCTTGCCCGAAATATCCCGCGGGGGTCCG  <  NC_014034/2490469‑2490433 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG