New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 22877270 (0.000)16 (0.110) 6/126 25.3 0.21 intergenic (‑124/+111) RCAP_rcc02125/acsA1 hypothetical protein/acetate‑‑CoA ligase
?NC_014034 = 2490469 119 (0.500)intergenic (‑82/+10) soxD/soxB sarcosine oxidase subunit delta/sarcosine oxidase subunit beta
Rejected: Position hash score below cutoff.

GGCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGTTTCACACCCCCGCACCCCCGTGGCGTA.GTTGCGCCAGGAAAAAGCACAGACTTTTGCCCG  >  NC_014034/2287636‑2287764
                                                                                              |                                      
ggCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGGTTTTCCCCCCCCCCCCCCCCCGGCgggggtgc                               >  1:2767039/1‑94 (MQ=1)
              ggTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGGTTCACACCCCCCCCCCCCCCCGGGGGA.GGTTCGCCCGGgaaaaaaa                >  2:1057098/1‑98 (MQ=1)
                 ttGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGCGG.GGGGGTTTCCCCCCCCCCCCCCCCCCGGGCGGG.GGGGCCCCGGGaaaaaaaaa               >  1:173229/1‑97 (MQ=0)
                 ttGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGCCGGGGGGGGTACACCCCCCCCCCCCCCCGCGGCGGG.GTGGCGCGGGAAAAAACca                >  1:166279/1‑101 (MQ=0)
                      cGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGGTTTACACCCCCCCCCCCCCCGGGGGGA.GGTGCGCCAGGGAAAAAcaacaacttt        >  2:439963/1‑93 (MQ=0)
                             ccccGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGGGGTTCACCCCCCCCCCCCCCCGGCGCAGGTTGTGCCGGGAAAAAGAAAAAACATTTTccct  >  2:3254663/1‑100 (MQ=0)
                                                                                              |                                      
GGCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC...GGGGGTTTCACACCCCCGCACCCCCGTGGCGTA.GTTGCGCCAGGAAAAAGCACAGACTTTTGCCCG  >  NC_014034/2287636‑2287764

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 23 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG