New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	390805 =	32 (0.200)	10 (0.060)	3/132	29.4	0.32	intergenic (‑121/+168)	mipZ/rpmE	chromosome partitioning protein MipZ/50S ribosomal protein L31
	?	NC_014034	= 1193597	11 (0.050)					intergenic (+62/‑189)	metK/trmB	methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase
Rejected: Position hash score below cutoff.

GTTTGCGCGGCGCCACCCGACCGCCAGAGGGGGCTCCGCCCCCCTTTTCCTTGGCAAAATACGCTGGGGGGGTGCGGGGGGCGAAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAA..................................................................................................  <  NC_014034/390927‑390805 ............................................................................................GCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACCGCTTTCTTCAGCGCCTCGACCAGATCGGT  <  NC_014034/1193597‑1193500                                                                                                                                                                                                                                                                                                   GGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCCTG                                                      >  2:2264610/1‑101 (MQ=17)                                                                     GGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCCCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTG                                                      >  2:3018585/1‑101 (MQ=17)                                                                       GGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGAT                                                    >  2:2997864/1‑101 (MQ=32)                                                                              GGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGCAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGA                                             >  2:4648322/1‑101 (MQ=17)                                                                              GGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCCTGATCTTTTGA                                             >  1:1937795/1‑101 (MQ=17)                                                                                GGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCCTGATCTTTTGAAA                                           >  1:2872118/1‑101 (MQ=17)                                                                                    gccCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGG                                       <  1:3980567/98‑1 (MQ=1)                                                                                    gAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGG                                       >  2:2480362/2‑101 (MQ=11)                                                                                     AGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGCGATCTTTTGCAACCGGC                                      >  2:3968196/1‑101 (MQ=0)                                                                                       CCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTC                                    >  1:712576/1‑101 (MQ=1)                                                                                            CGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACC                               >  1:4450781/1‑101 (MQ=1)                                                                                            CGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACC                               >  1:4593993/1‑101 (MQ=1)                                                                                                                                                                                                                               GTTTGCGCGGCGCCACCCGACCGCCAGAGGGGGCTCCGCCCCCCTTTTCCTTGGCAAAATACGCTGGGGGGGTGCGGGGGGCGAAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAA..................................................................................................  <  NC_014034/390927‑390805 ............................................................................................GCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACCGCTTTCTTCAGCGCCTCGACCAGATCGGT  <  NC_014034/1193597‑1193500 Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 37 ≤  ATCG