New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 68701213 (0.930)2 (0.010) 2/192 38.0 0.01 coding (1011/1089 nt) flhB flagellar biosynthetic protein FlhB
?NC_014034 3680737 = 220 (0.930)coding (429/1473 nt) RCAP_rcc03470 phosphate transporter
Rejected: Position hash score below cutoff.

GGGAAGTCGCGGCCGAGGCCGGGGTGCCGATCCATTCCGATCCGCCGACGGCCCGGGCGCTTTATGCGGCGGTCGACATCGGTCAGGAAATTCATCCGGACCAT....................................................................................................  >  NC_014034/68598‑68701
....................................................................................................CCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCC  >  NC_014034/3680737‑3680836
                                                                                                                                                                                                            
                                                                       GTCGACATCGGTCAGGAAATTCATCCGGACCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCT                                  >  1:1845230/1‑101 (MQ=255)
                                                                               CGGTCAGGAAATTCATCCGGACCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACA                          <  2:1845104/101‑1 (MQ=255)
                                                                                                                                                                                                            
GGGAAGTCGCGGCCGAGGCCGGGGTGCCGATCCATTCCGATCCGCCGACGGCCCGGGCGCTTTATGCGGCGGTCGACATCGGTCAGGAAATTCATCCGGACCAT....................................................................................................  >  NC_014034/68598‑68701
....................................................................................................CCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCC  >  NC_014034/3680737‑3680836

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG