New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 68701213 (0.930)2 (0.010) 2/192 38.0 0.01 coding (1011/1089 nt) flhB flagellar biosynthetic protein FlhB
?NC_014034 3680737 = 220 (0.930)coding (429/1473 nt) RCAP_rcc03470 phosphate transporter
Rejected: Position hash score below cutoff.

Only 100 of 233 total aligned reads displayed.

CGCCGACGACGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCCG  >  NC_014034/3680637‑3680837
                                                                                                    |                                                                                                    
 gcCGACGACGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCcatca                                                                                                     >  1:1792902/1‑101 (MQ=255)
   cgacgaCGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCatcatc                                                                                                   <  1:4442641/101‑1 (MQ=255)
   cgacgaCGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCatcatc                                                                                                   <  1:4253061/101‑1 (MQ=255)
   cgacgaCGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCatcatc                                                                                                   <  2:371522/101‑1 (MQ=255)
    gacgacGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCg                                                                                                  <  1:159962/101‑1 (MQ=255)
     acgacgCGGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGc                                                                                                 <  1:835847/101‑1 (MQ=255)
       gacgCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGccc                                                                                               >  1:2951577/1‑101 (MQ=255)
       gacgCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGccc                                                                                               >  1:1467953/1‑101 (MQ=255)
        acgCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCa                                                                                              >  2:946150/1‑101 (MQ=255)
           ccgccgACGATCGAATGGGTGGTGGAGACCGGCCCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGAt                                                                                           <  1:890552/101‑1 (MQ=255)
            cgccgACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATg                                                                                          >  1:4510284/1‑101 (MQ=255)
              ccgACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGaa                                                                                        <  2:2994725/101‑1 (MQ=255)
                gacgaTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAAt                                                                                      <  1:3904435/101‑1 (MQ=255)
                gacgaTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAAt                                                                                      >  2:2051949/1‑101 (MQ=255)
                 acgaTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATg                                                                                     <  2:3944762/101‑1 (MQ=255)
                  cgaTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATgc                                                                                    <  2:43531/101‑1 (MQ=255)
                   gctCGACTGGGTGGTGGAGACCGGCCCTGCCATCCTCGTCGTCACATCCAGCCACAGCTCCGAGGCGAGCCGCGCCGCCAGCTTTCCCCAGATCAAATgcg                                                                                   >  2:1554689/3‑101 (MQ=255)
                    aTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATgcgc                                                                                  <  2:910190/101‑1 (MQ=255)
                    aTCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATgcgc                                                                                  >  1:318805/1‑101 (MQ=255)
                     tCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGcgcc                                                                                 <  2:1372460/101‑1 (MQ=255)
                     tCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGcgcc                                                                                 >  1:3287006/1‑101 (MQ=255)
                     tCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGcgcc                                                                                 >  1:3780620/1‑101 (MQ=255)
                       gAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGcgccgc                                                                               >  2:2946555/1‑101 (MQ=255)
                       gAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGcgccgc                                                                               <  1:2254527/101‑1 (MQ=255)
                        aaTGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCa                                                                              >  1:4044843/1‑101 (MQ=255)
                         aTGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCAt                                                                             >  2:3982628/1‑101 (MQ=255)
                         aTGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCAt                                                                             <  1:4093639/101‑1 (MQ=255)
                         aTGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCAt                                                                             >  2:1469066/1‑101 (MQ=255)
                          tGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATc                                                                            <  1:4283891/101‑1 (MQ=255)
                          tGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATc                                                                            <  1:244229/101‑1 (MQ=255)
                          tGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATc                                                                            >  1:2398923/1‑101 (MQ=255)
                           gggTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCg                                                                           <  2:2577578/101‑1 (MQ=255)
                             gtggtgGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCggg                                                                         >  2:4111581/1‑101 (MQ=255)
                              tggtggAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGc                                                                        <  1:2519184/101‑1 (MQ=255)
                                gtggAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCAc                                                                      <  2:1856031/101‑1 (MQ=255)
                                    agaCCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGcc                                                                  >  2:2493809/1‑101 (MQ=255)
                                     gcccGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCt                                                                 <  1:2498854/99‑1 (MQ=255)
                                      aCCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTc                                                                <  2:3839993/101‑1 (MQ=255)
                                         ggCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCggg                                                             <  2:2119486/101‑1 (MQ=255)
                                           cgcCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGgcg                                                           >  2:1136029/1‑101 (MQ=255)
                                            gcCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGgcgc                                                          >  1:2064107/1‑101 (MQ=255)
                                             cccccATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGcc                                                         <  2:3780335/101‑1 (MQ=255)
                                                ccATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAgg                                                      >  1:768591/1‑101 (MQ=255)
                                                ccACCCAGGCCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAgg                                                      <  2:4458941/101‑1 (MQ=255)
                                                 cATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGa                                                     >  2:1067623/1‑101 (MQ=255)
                                                  aTCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGAt                                                    >  1:4581884/1‑101 (MQ=255)
                                                  aTCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGAt                                                    <  1:1920245/101‑1 (MQ=255)
                                                  aTCCAGGCCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGAt                                                    <  2:4598835/101‑1 (MQ=255)
                                                     cAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATccc                                                 >  2:683189/1‑101 (MQ=255)
                                                      aGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCg                                                <  1:4123186/101‑1 (MQ=255)
                                                         tCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTc                                             >  1:1329472/1‑101 (MQ=255)
                                                          cGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGNCGCCAGGATCCCGGTCg                                            >  2:652366/1‑101 (MQ=255)
                                                           gCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCga                                           >  1:102105/1‑101 (MQ=255)
                                                            ccACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCgag                                          >  1:167766/1‑101 (MQ=255)
                                                            ccACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCgag                                          <  1:2173977/101‑1 (MQ=255)
                                                            ccACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGCCgag                                          >  1:608528/1‑101 (MQ=255)
                                                             cacaTGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCgaga                                         >  1:347786/1‑101 (MQ=255)
                                                              ncaTGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGNNnngnn                                        >  1:574658/2‑99 (MQ=255)
                                                               caTGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACg                                       >  1:1394836/1‑101 (MQ=255)
                                                                aTGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACgg                                      <  2:361234/101‑1 (MQ=255)
                                                                aTGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACgg                                      <  1:2852251/101‑1 (MQ=255)
                                                                  gCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTc                                    >  2:3199626/1‑101 (MQ=255)
                                                                   cAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCt                                   >  2:2949186/1‑101 (MQ=255)
                                                                    aGCCACAGCGCGGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  <  2:2350018/101‑1 (MQ=255)
                                                                    aGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  <  1:3864403/101‑1 (MQ=255)
                                                                    aGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  >  2:3576960/1‑101 (MQ=255)
                                                                    aGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  >  2:4409804/1‑101 (MQ=255)
                                                                    aGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  <  1:3356506/101‑1 (MQ=255)
                                                                    aGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCtt                                  >  2:886358/1‑101 (MQ=255)
                                                                       cacaGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGAc                               >  1:942155/1‑101 (MQ=255)
                                                                        acaGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGAcc                              <  2:4509989/101‑1 (MQ=255)
                                                                        acaGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGAcc                              <  2:772042/101‑1 (MQ=255)
                                                                         caGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGATACGGTCTTGACca                             >  1:3083611/1‑101 (MQ=255)
                                                                          aGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACcac                            >  1:4316732/1‑101 (MQ=255)
                                                                           gcgcCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACcaca                           <  2:1200579/101‑1 (MQ=255)
                                                                             gcCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATc                         <  1:71432/101‑1 (MQ=255)
                                                                             gcCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATc                         <  1:2708480/101‑1 (MQ=255)
                                                                               cGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGc                       >  2:2254187/1‑101 (MQ=255)
                                                                                 aGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGccc                     >  1:2131462/1‑101 (MQ=255)
                                                                                 aGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGccc                     <  2:3270972/101‑1 (MQ=255)
                                                                                 aGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGccc                     <  1:1992433/101‑1 (MQ=255)
                                                                                   gCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGccccc                   <  2:2341047/101‑1 (MQ=255)
                                                                                   gCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCACGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGccccc                   <  2:4031856/101‑1 (MQ=255)
                                                                                         agcGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAAt             <  2:3083367/101‑1 (MQ=255)
                                                                                         agcGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAAt             >  2:3222728/1‑101 (MQ=255)
                                                                                          gcgcCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATc            <  2:2857365/101‑1 (MQ=255)
                                                                                          gcgcCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATc            <  1:95388/101‑1 (MQ=255)
                                                                                            gccgccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAg          >  2:1417520/1‑101 (MQ=255)
                                                                                             ccgccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGCTCGCCAGGATCCCGGTCCATACGGTCTTGACCACATCGCCCCCGGCAATCAGc         >  2:3520565/1‑101 (MQ=255)
                                                                                              cgccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCg        <  2:2004921/101‑1 (MQ=255)
                                                                                               gccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGa       >  2:296074/1‑101 (MQ=255)
                                                                                                ccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAg      >  1:35897/1‑101 (MQ=255)
                                                                                                ccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAg      <  2:2823084/101‑1 (MQ=255)
                                                                                                ccATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAg      <  2:1618730/101‑1 (MQ=255)
                                                                                                  ctcatcGCCCAGAGGAAATGCGCCCCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGcc    <  2:2751292/100‑1 (MQ=255)
                                                                                                  atcatcGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGcc    >  2:2644652/1‑101 (MQ=255)
                                                                                                   tcatcGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGccc   <  1:4643670/101‑1 (MQ=255)
                                                                                                    catcGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCCg  >  2:3049993/1‑101 (MQ=255)
                                                                                                    catcGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCCg  >  1:3231611/1‑101 (MQ=255)
                                                                                                    catcGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCCg  >  1:1111769/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CGCCGACGACGCCGCCGACGATCGAATGGGTGGTGGAGACCGGCGCCCCCATCCAGGTCGCCACATGCAGCCACAGCGCCGAGGCGAGCAGCGCCGCCATCATCGCCCAGATGAAATGCGCCGCATCGGGCACGGCCTCGGGCGCCAGGATCCCGGTCGAGACGGTCTTGACCACATCGCCCCCGGCAATCAGCGAGCCCG  >  NC_014034/3680637‑3680837

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG