New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 300660 =255 (1.170)87 (0.400) 18/184 23.9 0.39 intergenic (+13/+131) RCAP_rcc00263/RCAP_rcc00264 winged helix family two component transcriptional regulator/hypothetical protein
?NC_014034 1608059 = 13 (0.050)intergenic (+329/‑18) RCAP_rcc01484/murD hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Rejected: Position hash score below cutoff.

Only 100 of 280 total aligned reads displayed.

CTACCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCGCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAG  >  NC_014034/300560‑300760
                                                                                                     |                                                                                                    
 tACCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.Gc                                                                                                     >  2:320119/1‑101 (MQ=255)
 tACCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.Gc                                                                                                     <  2:4334404/101‑1 (MQ=255)
  aCCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.ggg                                                                                                    >  2:3887133/1‑99 (MQ=255)
  aCCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCg                                                                                                    <  1:4542302/101‑1 (MQ=255)
   ccGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCgg                                                                                                   >  1:128326/1‑101 (MQ=255)
   ccGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCgg                                                                                                   >  2:1725457/1‑101 (MQ=255)
    cGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCggg                                                                                                  >  1:1989731/1‑101 (MQ=255)
    cGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCCTCTGATCACGGACTCGAGCGGCTACCGTCTGGTCCCCTGATACCGCGCAGGA.GCggg                                                                                                  >  2:1479469/1‑101 (MQ=255)
     ggCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCgggg                                                                                                 <  1:34047/101‑1 (MQ=255)
     ggCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCgggg                                                                                                 <  1:1696624/101‑1 (MQ=255)
      gCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCggggg                                                                                                >  1:3799815/1‑101 (MQ=255)
       cTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGt                                                                                               <  1:2530415/101‑1 (MQ=255)
        tGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCggggggt                                                                                              >  2:1670700/1‑99 (MQ=255)
        tGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGtt                                                                                              <  1:512462/101‑1 (MQ=255)
        tGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGtt                                                                                              <  2:4359938/101‑1 (MQ=255)
         gcgcCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGttt                                                                                             <  1:2680639/101‑1 (MQ=255)
         gcgcCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGgtt                                                                                             >  2:1528860/1‑101 (MQ=255)
           gcCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTca                                                                                           <  2:646214/101‑1 (MQ=255)
           gcCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGTTca                                                                                           >  2:2428035/1‑101 (MQ=255)
            ccAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGgtttcc                                                                                          >  2:1042930/1‑98 (MQ=255)
            ccAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGTTcac                                                                                          >  2:599986/1‑101 (MQ=255)
              agaagaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCacac                                                                                        >  1:1098375/1‑101 (MQ=255)
               gaagaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACAcc                                                                                       <  1:4622476/101‑1 (MQ=255)
                aagaTCGAGCCCGATCCGTCGAGTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGTTCACAccc                                                                                      >  2:3155247/1‑101 (MQ=255)
                aagaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACAccc                                                                                      <  1:1152247/101‑1 (MQ=255)
                 agaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGgttgtcccccc                                                                                     >  1:2070855/1‑93 (MQ=255)
                  gaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACAccccc                                                                                    <  2:3674101/101‑1 (MQ=255)
                  gaTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACAccccc                                                                                    <  1:2215809/101‑1 (MQ=255)
                   aTCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCcg                                                                                   <  2:3380959/101‑1 (MQ=255)
                         cccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGATTCACACCCCCGCAcccc                                                                             >  2:777869/1‑101 (MQ=255)
                           cGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCg                                                                           <  1:2411905/101‑1 (MQ=255)
                            gATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGt                                                                          <  2:1204287/101‑1 (MQ=255)
                             aTCCGTCGAATGCGCGGCTTCTGATCACGGAATTGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTg                                                                         <  1:3998178/101‑1 (MQ=255)
                              tCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTgg                                                                        >  1:494254/1‑101 (MQ=255)
                              tCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGGTCACACCCCCCCCccccccggg                                                                        >  2:3554659/1‑97 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTTCCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGat                                                                     <  1:600047/101‑1 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGat                                                                     >  2:3955719/1‑101 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGat                                                                     <  2:709877/101‑1 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGat                                                                     >  2:3025572/1‑101 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCCGGGGGGTCGCCCCCCCCCCccccccccggcg                                                                     >  2:4121419/1‑94 (MQ=255)
                                 gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCACAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTggggt                                                                     >  2:2725006/1‑99 (MQ=255)
                                  tCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGata                                                                    <  1:2598342/101‑1 (MQ=255)
                                  tCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGata                                                                    >  2:2954410/1‑101 (MQ=255)
                                    gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATAtt                                                                  <  1:1043013/101‑1 (MQ=255)
                                    gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATAtt                                                                  <  1:2051382/101‑1 (MQ=255)
                                    gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATAtt                                                                  >  1:745630/1‑101 (MQ=255)
                                    gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATAtt                                                                  >  2:4489699/1‑101 (MQ=255)
                                     aaTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATAttt                                                                 <  2:2710745/101‑1 (MQ=255)
                                     aaTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGCCTGGTCGCCTGATACCGCGCAGGAGGCGGGGGTTTCACACCCCCCCCCCCCCCCGCGATAtt                                                                  >  1:897055/1‑101 (MQ=255)
                                          gcgGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCAcc                                                            >  2:2448544/1‑101 (MQ=255)
                                          gcgGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCAcc                                                            >  2:2583781/1‑101 (MQ=255)
                                           cgGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCa                                                           <  1:3887418/101‑1 (MQ=255)
                                             gCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGTTTACACCCCCCCACCCCCCTGGGGTAttttgacccag                                                         >  2:546182/1‑93 (MQ=255)
                                               ttCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGt                                                       <  2:129422/101‑1 (MQ=255)
                                                  tGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGaa                                                    <  2:1190709/101‑1 (MQ=255)
                                                   gATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGaaa                                                   <  1:3705523/101‑1 (MQ=255)
                                                     tCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAgg                                                 <  1:1639487/101‑1 (MQ=255)
                                                     tCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAgg                                                 >  1:2986809/1‑101 (MQ=255)
                                                       aCGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGc                                               <  1:3286087/101‑1 (MQ=255)
                                                        cGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GGGGGGGGTTCACACCCCCCCCCCCCCCGGGGGTATTTGCACCCAGGGGGAAggggc                                              >  1:3245817/1‑99 (MQ=255)
                                                         ggAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAc                                             <  1:959254/101‑1 (MQ=255)
                                                           aaTCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAccc                                           >  2:2643514/1‑101 (MQ=255)
                                                            agcGGGCGGCTCCCGTCTGGTCGCCTGATCCCGCGCAGGA.GCGGGGTTTTCACCCCCCCGCCCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCCcccc                                          <  1:2762254/99‑1 (MQ=37)
                                                            aTCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAcccc                                          <  1:5605/101‑1 (MQ=255)
                                                              cGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCgg                                        <  1:787416/101‑1 (MQ=255)
                                                              cGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAACCAgg                                        >  1:3093967/1‑101 (MQ=255)
                                                                ggcggcTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGGTTCACACCCCCCCACCCCCGTGGGGGATTTGTACCAAGGGGGAAAGGCACCCCcggg                                      >  2:919232/1‑100 (MQ=255)
                                                                 gcggcTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGAt                                     <  2:4086123/101‑1 (MQ=255)
                                                                   ggcTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGGTCt                                   >  2:2873426/1‑101 (MQ=255)
                                                                   ggcTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCt                                   <  1:640426/101‑1 (MQ=255)
                                                                    gcTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTg                                  <  1:394309/101‑1 (MQ=255)
                                                                     cTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGTACCCCGGGATCTGc                                 >  1:2145649/1‑101 (MQ=255)
                                                                       aCCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCtt                               >  2:1353081/1‑101 (MQ=255)
                                                                       aCCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCtt                               <  2:2497771/101‑1 (MQ=255)
                                                                       aCCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCtt                               <  2:2354152/101‑1 (MQ=255)
                                                                       aCCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCtt                               >  2:1947178/1‑101 (MQ=255)
                                                                        ccGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCttt                              <  1:1585484/101‑1 (MQ=255)
                                                                        ccGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCttt                              >  2:4257917/1‑101 (MQ=255)
                                                                         cGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTc                             <  1:4121705/101‑1 (MQ=255)
                                                                         cGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTc                             <  1:322430/101‑1 (MQ=255)
                                                                           tCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAc                           <  1:4216220/101‑1 (MQ=255)
                                                                           tCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAc                           <  1:3554917/101‑1 (MQ=255)
                                                                             tGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCt                         >  2:3798299/1‑101 (MQ=255)
                                                                             tGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCt                         <  2:2316191/101‑1 (MQ=255)
                                                                              ggTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCtt                        <  2:660138/101‑1 (MQ=255)
                                                                                  gCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTg                    >  2:3404723/1‑101 (MQ=255)
                                                                                   ccTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGa                   <  2:2068282/101‑1 (MQ=255)
                                                                                    cTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaa                  >  2:2146774/1‑101 (MQ=255)
                                                                                    cTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaa                  >  1:4650387/1‑101 (MQ=255)
                                                                                      gATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaaaa                <  2:2084739/101‑1 (MQ=255)
                                                                                      gATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaaaa                >  2:96174/1‑101 (MQ=255)
                                                                                       aTACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAat               <  1:1786180/101‑1 (MQ=255)
                                                                                        tACCGCGCAGGA.GCGGGGGTTTCACCCCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAata              <  2:4428076/101‑1 (MQ=255)
                                                                                        tACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAata              <  2:1558362/101‑1 (MQ=255)
                                                                                         aCCGCGCAGGA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAatat             <  1:320151/101‑1 (MQ=255)
                                                                                           cgcgCAGGA.GCTGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGTATCTGCTTTCACCTTGGTGAAAATATcc           <  1:733350/101‑1 (MQ=255)
                                                                                                 ggA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCggggg     >  2:4624870/1‑101 (MQ=255)
                                                                                                  gA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCgggggg    >  2:1136963/1‑101 (MQ=255)
                                                                                                  gA.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCgggggg    <  1:4489994/101‑1 (MQ=255)
                                                                                                   a.GCGGGGGTTTCACACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGa   <  1:1415912/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
CTACCGGCTGCGCCAGAAGATCGAGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGA.GCGGGGGTTTCACACCCCCGCGCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAG  >  NC_014034/300560‑300760

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 28 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG