BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473410 =	168 (0.850)	6 (0.030)	5/166	31.6	0.03	intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
*	?	NC_014034	3382066 =	167 (0.700)	6 (0.030)	5/166	31.6	0.03	intergenic (+100/+129)	ispB/RCAP_rcc03185	octaprenyl‑diphosphate synthase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 208 total aligned reads displayed.


GGATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGG  >  NC_014034/1473310‑1473510


ggATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAg                                                                                                         >  2:3589843/1‑101 (MQ=255)


gaagggggCGAACCAGGAAACGCATCGCTTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAg                                                                                                         <  2:4121770/96‑1 (MQ=25)


 gATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCCCCGAgg                                                                                                        >  1:1666476/1‑101 (MQ=255)


   tCGGGCGGAACAGGAACCGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAgggc                                                                                                      <  2:508451/101‑1 (MQ=255)


     gggCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCCAgggcgg                                                                                                    >  1:913343/1‑101 (MQ=255)


     gggCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAACGCCCCCCGAgggcgg                                                                                                    >  2:3592708/1‑101 (MQ=255)


      ggCGGAACAGGAACCGCATCGCTTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAgggcggg                                                                                                   <  1:2746941/101‑1 (MQ=255)


        gggAACAGGAACCGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAgggcggggc                                                                                                 <  2:1504724/100‑1 (MQ=255)


        cGGAACAGGAACCGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAgggcggggc                                                                                                 <  2:4576548/101‑1 (MQ=255)


           aaCAGGAACCGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGgcggggcggg                                                                                              <  2:4248991/101‑1 (MQ=255)


           aaCAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGGCCGCCGAGGgcgggggggg                                                                                              >  2:540589/1‑101 (MQ=255)


             cAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGggcgggcg                                                                                            >  2:4012142/1‑101 (MQ=255)


             cAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAACGCCCGCCGAGGgcgggggggggg                                                                                            >  1:4070592/1‑99 (MQ=255)


               ggAACCGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCt                                                                                          <  2:2669475/101‑1 (MQ=255)


                gAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.g                                                                                        <  1:4391921/101‑1 (MQ=255)


                    cGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCg                                                                                   >  2:3516710/1‑101 (MQ=255)


                     gCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGGGGGCGGGGCGGGGGCT.GG.CCGa                                                                                  >  1:1415798/1‑101 (MQ=255)


                      cctCGCTTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCGGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAg                                                                                 <  2:2052966/99‑1 (MQ=255)


                       aTCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGCGGGCGGGGCGGGCGCC.GG.CCGCgg                                                                                >  2:669903/1‑101 (MQ=255)


                       aTCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAgg                                                                                <  1:1077149/101‑1 (MQ=255)


                         ctgccgatctcgcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.c                                                                             <  2:1056860/91‑1 (MQ=255)


                            gTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAggggcct                                                                           >  1:615141/1‑97 (MQ=255)


                            gTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCtt                                                                          >  2:2925001/1‑101 (MQ=255)


                            gTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCC.GG.GCCAggggcct                                                                           >  1:2036949/1‑97 (MQ=38)


                             ttcccccCCCCGTCGCGCACCCGCCCGGCCCGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCttt                                                                         <  1:1644644/98‑1 (MQ=37)


                              ttCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCG.GG.CCGAGGG.CCCTTg                                                                        >  1:1175870/1‑101 (MQ=255)


                               tCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTgg                                                                       >  1:1529774/1‑101 (MQ=255)


                                  ccgcccgTCGCGCACCCGCCCGGCCCGACCTTTTCCCCAAGCGCAGCAGAGGCCAGCCCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGcc                                                                    <  1:237417/101‑1 (MQ=37)


                                  ccgcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGGGGGCGCC.GG.GCCACGG.CCTCTGGGcc                                                                    >  2:1173898/1‑101 (MQ=37)


                                   cgcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCGCGGG.cagatcgggag                                                                   >  1:1056949/1‑91 (MQ=37)


                                    gcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGGC.GG.CCGGGGG.CCTTTTGGgccc                                                                  >  2:1836161/1‑101 (MQ=37)


                                    gcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGCCG.GGCCCGGGGG.CGTTTGGGccc                                                                   >  2:3153423/1‑101 (MQ=37)


                                    gcccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCC.GG.CCGAGGG.GCCTTGGGcccc                                                                  >  1:4157251/1‑101 (MQ=255)


                                     cccgTCGCGCACCCGCCCGGCCCGCCCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGccccc                                                                 <  1:2664180/101‑1 (MQ=255)


                                     cccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCGAGGG.CCTTTGGGccccc                                                                 >  1:1909802/1‑101 (MQ=255)


                                     cccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCGAGGG.CCCTTGGGgcccc                                                                 >  2:2353682/1‑101 (MQ=255)


                                     cccgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGccccc                                                                 <  2:2432489/101‑1 (MQ=255)


                                      ccgTCGCGCACCCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCcg                                                                <  2:2380859/101‑1 (MQ=255)


                                      ccgTCGCGCAACCCCCCGGCACGCCCGTTCCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCcg                                                                <  2:1194528/101‑1 (MQ=255)


                                      catcgcgccgaCCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAACGCCCGCCGAGGGCGGGGCGGGCGCC.GG.CCGAGGG.GCCTTTGGCCCCcg                                                                >  2:2290573/11‑101 (MQ=25)


                                       cgTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCcgg                                                               <  2:2625758/101‑1 (MQ=255)


                                        gTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCGAGGG.CCCTTGGGGCCCccgc                                                              >  1:520130/1‑101 (MQ=37)


                                          cgcgCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCC.GG.CCGAGGG.CCCTTGGGGCCCccgcgg                                                            >  2:2457787/1‑101 (MQ=37)


                                          cgccCACCCGCCCGGCCCGCCCGTTCCCCCAAGCGCAGCAGGGCCCAGCCCCCGCCGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCcggcgg                                                            <  1:3699311/101‑1 (MQ=18)


                                           gcccAACCGCCCGGCCCGCCCGTTCCCCCAAGCGCAGAAGGGTCCCGCGCCCGCCGAGGGCGGGGCGGGCGTT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGt                                                           <  1:3861576/98‑1 (MQ=18)


                                            ggaaaCCGCCGGGCACGACCGTTTCCCCAGGGGCAGCAGGGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTc                                                          <  2:759239/98‑1 (MQ=21)


                                            cgcACCCGCCCGCCACGCCCTTTTCCCCAGGCGCAGCGGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGTT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTc                                                          <  1:3591859/101‑1 (MQ=21)


                                             gcAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCT.GG.CCGAGGGCCCTTTGGGCCCCcggcggcc                                                          >  2:1293476/1‑99 (MQ=255)


                                               aaCCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACg                                                       >  1:1881299/1‑101 (MQ=255)


                                                 cccccgggCACGGCCTTTCCCCCAGGCGCAGGAGGGGCCGGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACggg                                                     <  2:2312064/95‑1 (MQ=17)


                                                 ccGCCCGGCAGCACGGTTTCCCCAGGCGCAGAAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACggg                                                     <  1:4549273/101‑1 (MQ=21)


                                                 ccGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCTCGG.GCG.GGG.CCTGTTGGCCCCcggcgggccccgg                                                     >  2:4278808/1‑94 (MQ=25)


                                                    cccGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCa                                                  >  2:1069991/1‑101 (MQ=255)


                                                    cccGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCCCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCa                                                  <  2:1415703/101‑1 (MQ=255)


                                                     ccGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.GCTTTGGGCCCCCCGCGGTCACCGGGGaa                                                 >  2:3282119/1‑101 (MQ=25)


                                                      cGGCACGCCCGTTCCCCCAGGCGCAGCAGGGCCCGGCGCCCGCCGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCaaa                                                <  1:3237520/101‑1 (MQ=18)


                                                       ggCCCGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAAt                                               <  1:1325364/101‑1 (MQ=255)


                                                       ggCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAAt                                               <  2:2009437/101‑1 (MQ=255)


                                                       gccccGACCTTTTCCCCAGGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAAt                                               <  2:2248866/97‑1 (MQ=255)


                                                         cACGCCCGTTCCCCCAAGCGCAGCAGAGCCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGt                                             <  1:296479/101‑1 (MQ=255)


                                                             aCCGTTTCCCCAAGCGCAGCAGAGGCCACCGCCCGCCGAGGGGGGGGCGGGGGCG.GG.CCGAGGG.GCTTTGGGGCCCCGGGGGGGGCGGGGGAAAAGGcgcg                                         >  1:3212047/1‑101 (MQ=19)


                                                               cGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGGCACGGGGCAAATGTCGCGCa                                       >  1:2232249/1‑101 (MQ=255)


                                                                gtccccccAGGCGCGGAGGGGGCCGGCGCCCGCGGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCAt                                      <  2:3912188/97‑1 (MQ=17)


                                                                gTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCCGCGGGCACGGGGCAAATGTCGCGCAt                                      >  1:3630983/1‑101 (MQ=255)


                                                                gTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCCTTGGGCCCCCCGCGGGCACGGGGCAAAAGTcgcggac                                      >  2:1799328/1‑98 (MQ=21)


                                                                 ttcccacAAGCGCGGCAGGGGCCGGCCCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATg                                     <  2:1927551/95‑1 (MQ=18)


                                                                  tcccccAAGGGCAGCAGAGGCCGGCGCCCGCCGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGa                                    <  2:2191907/99‑1 (MQ=255)


                                                                    ccccAAGCGCAGCAGAGGCCGGCCCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGAcc                                  <  1:2442529/101‑1 (MQ=255)


                                                                        aaGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCgg                              >  2:4367907/1‑101 (MQ=255)


                                                                         aGCGCAGGGGGGGCCGGCCCCCGCGGGGGGCGGGGGGGGCGTT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGc                             <  1:3361910/101‑1 (MQ=17)


                                                                         aGCGCAGCAGGGGCCGGGGCCCGCCGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGc                             <  2:155583/101‑1 (MQ=18)


                                                                         aGCGCAGCAGAGCCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGc                             <  2:2056630/101‑1 (MQ=255)


                                                                           cgcAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGa                           >  2:1454314/1‑101 (MQ=255)


                                                                            gcagcaGGGCCCAGCCCCCGCGGGGGGGGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGAt                          <  2:1626254/101‑1 (MQ=17)


                                                                            gcagcaGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.GCTTTGGGCCCCCGGAGGTCACGGGGCAAATGTCGCGCATTACCTTGGCGAt                          >  1:760320/1‑101 (MQ=18)


                                                                            gcagcaGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGAt                          >  2:4604278/1‑101 (MQ=255)


                                                                            gcagcaGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCAAt                          >  2:258316/1‑101 (MQ=255)


                                                                             cagcagGGGCCGGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATg                         <  1:2561886/101‑1 (MQ=255)


                                                                              ggcagGGGCCGGCGCCCGCCGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATgg                        <  1:3961074/100‑1 (MQ=255)


                                                                                 aggccccAGCGCCCTCGGAGGGGGGGGCGTTCTCT.GG.CCGATGG.CCTTTGGGCCCCCGGCGGCCACGGGGCAAATGTCTCGCATGACCTCTGCGATGGCCt                     <  2:2040244/96‑1 (MQ=17)


                                                                                 agagGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.GCTTTGGGCCCCCCGCGGGCACGGGGCAAATGTCGCGCATGACCCCCGCGATGGccc                     >  1:2569731/1‑100 (MQ=17)


                                                                                 agagGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCC.GG.CCGAGGG.CCTTTGGGCCCCCCGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGccc                     >  1:3823160/1‑100 (MQ=255)


                                                                                  ggggcgggcgcCCGCGGGGGGGGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTc                    <  1:1286998/94‑1 (MQ=14)


                                                                                      ccAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTc                >  1:359888/1‑101 (MQ=255)


                                                                                       cggcccccgccGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCa               <  2:1462317/96‑1 (MQ=255)


                                                                                       cggcccccgccGAGGGCGGGGGGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCa               <  2:4156963/96‑1 (MQ=255)


                                                                                       cAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCa               >  1:2993359/1‑101 (MQ=255)


                                                                                        ctcccccgccGGGGGGGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaa              <  1:2912991/97‑1 (MQ=255)


                                                                                        aGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCCTGACCTCGGCGCTGGCCTCCGGCaa              >  1:356610/1‑101 (MQ=14)


                                                                                        aGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaa              >  1:99299/1‑101 (MQ=255)


                                                                                         gcgcCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaa             >  1:3466650/1‑101 (MQ=255)


                                                                                          cgcccgccGAGGGGGGGGGGGGCCCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaaa            <  2:2561813/101‑1 (MQ=255)


                                                                                           gcccgccGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaaaa           >  2:3680002/1‑101 (MQ=255)


                                                                                            cccgccGGGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAACAAg          <  1:3590111/101‑1 (MQ=255)


                                                                                             cgtcggAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGTCCTCGGCGATGGCCTCGGTCAAAAAgg         <  2:3090654/96‑1 (MQ=255)


                                                                                                 cgAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTGGGCGATGGCCCCGGCCAAAAAGGGCAg     >  2:2845336/1‑101 (MQ=255)


                                                                                                  gAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAgg    >  2:319906/1‑101 (MQ=255)


                                                                                                  gAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAgg    >  2:2532486/1‑101 (MQ=255)


                                                                                                   aGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGCTGGCCTCGGTCAAAAAGGGCAggg   >  2:4206761/1‑101 (MQ=255)


                                                                                                    gggcggggcgGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAgggg  >  1:640399/1‑101 (MQ=255)


GGATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGACCGTTTCCCCAAGCGCAGCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCT.GG.CCGAGGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGG  >  NC_014034/1473310‑1473510

Base quality scores:


ATCG

< 3 ≤


ATCG

< 12 ≤


ATCG

< 20 ≤


ATCG

< 32 ≤


ATCG

< 40 ≤


ATCG